Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G070200 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 1.7e-29 132.1 72 100.0
Phvul.007G070001 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 1.5e-09 65.9 70 64.3
VMungo0720G0520 Vigna mungo HOM05D000607 ORTHO05D000518 7.4e-09 63.5 70 62.9
TWI39G1228 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 4.8e-08 60.8 64 62.5
Oeu056258.1 Olea europaea HOM05D000607 ORTHO05D000518 6.3e-08 60.5 70 58.6
Glyma.10G235700 Glycine max HOM05D000607 ORTHO05D000518 8.2e-08 60.1 70 58.6
PGR042G2454 Punica granatum HOM05D000607 ORTHO05D000518 8.2e-08 60.1 73 54.8
Gohir.A09G041900 Gossypium hirsutum HOM05D000607 ORTHO05D000518 1.1e-07 59.7 50 72.0
Gohir.D09G042800 Gossypium hirsutum HOM05D000607 ORTHO05D000518 1.1e-07 59.7 50 72.0
Gorai.006G049200 Gossypium raimondii HOM05D000607 ORTHO05D000518 1.1e-07 59.7 50 72.0
Lj5g0019793 Lotus japonicus HOM05D000607 ORTHO05D000518 1.1e-07 59.7 70 57.1
Actinidia31820 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.4e-07 59.3 70 57.1
CSS0020590 Camellia sinensis var. sinensis HOM05D000607 ORTHO05D000518 1.4e-07 59.3 70 57.1
Aa31LG11G3130 Aethionema arabicum HOM05D000607 ORTHO05D000518 2.4e-07 58.5 50 70.0
Ca_10768_v3 Cicer arietinum L. HOM05D000607 ORTHO05D000518 2.4e-07 58.5 70 57.1
QL09p014173 Quercus lobata HOM05D000607 ORTHO05D000518 2.4e-07 58.5 70 57.1
ClCG09G012900 Citrullus lanatus HOM05D000607 ORTHO05D000518 3.1e-07 58.2 70 55.7
CsaV3_3G049960 Cucumis sativus L. HOM05D000607 ORTHO05D000518 3.1e-07 58.2 70 55.7
Eucgr.A02786 Eucalyptus grandis HOM05D000607 ORTHO05D000518 3.1e-07 58.2 70 54.3
HanXRQChr09g0253611 Helianthus annuus HOM05D000607 ORTHO05D000518 3.1e-07 58.2 50 70.0
Lsat_1_v5_gn_9_55940 Lactuca sativa HOM05D000607 ORTHO05D000518 3.1e-07 58.2 50 70.0
Manes.14G026000 Manihot esculenta HOM05D000607 ORTHO05D000518 3.1e-07 58.2 50 70.0
THA.LOC104818169 Tarenaya hassleriana HOM05D000607 ORTHO05D000518 3.1e-07 58.2 70 54.3
Gohir.A12G227100 Gossypium hirsutum HOM05D000607 ORTHO05D000518 4.1e-07 57.8 71 53.5
Gohir.D12G229600 Gossypium hirsutum HOM05D000607 ORTHO05D000518 4.1e-07 57.8 71 53.5
Gorai.008G245900 Gossypium raimondii HOM05D000607 ORTHO05D000518 4.1e-07 57.8 71 53.5
Hma1.2p1_0270F.1_g108010 Hydrangea macrophylla HOM05D000607 ORTHO05D000518 4.1e-07 57.8 70 55.7
Hund04743 Selenicereus undatus HOM05D000607 ORTHO05D000518 4.1e-07 57.8 50 70.0
CiPaw.04G071200 Carya illinoinensis HOM05D000607 ORTHO05D000518 5.3e-07 57.4 50 68.0
AUR62021189 Chenopodium quinoa HOM05D000262 ORTHO05D009380 5.3e-07 57.4 50 72.0
Duzib084G1049 Durio zibethinus HOM05D000607 ORTHO05D000518 5.3e-07 57.4 50 70.0
Medtr1g100587 Medicago truncatula HOM05D000607 ORTHO05D000518 5.3e-07 57.4 71 54.9
THA.LOC104798928 Tarenaya hassleriana HOM05D000607 ORTHO05D000518 5.3e-07 57.4 50 70.0
arahy.Tifrunner.gnm1.ann1.U9GE21 Arachis hypogaea HOM05D000607 ORTHO05D000518 6.9e-07 57.0 71 53.5
BcaB04g19847 Brassica carinata HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 72.0
BcaNung01842 Brassica carinata HOM05D001293 ORTHO05D001143 6.9e-07 57.0 50 70.0
CAN.G490.33 Capsicum annuum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Cpa.g.sc107.55 Carica papaya HOM05D000607 ORTHO05D000518 6.9e-07 57.0 70 54.3
COL.COLO4_14312 Corchorus olitorius HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Gohir.A12G257600 Gossypium hirsutum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 68.0
Gohir.D12G258900 Gossypium hirsutum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 68.0
Gorai.008G277300 Gossypium raimondii HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 68.0
Lalb_Chr21g0305041 Lupinus albus HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 70.0
Nitab4.5_0002117g0010 Nicotiana tabacum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Nitab4.5_0003072g0030 Nicotiana tabacum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Sabra12G0106400 Salix brachista HOM05D000607 ORTHO05D000518 6.9e-07 57.0 50 68.0
Solyc03g025800.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Sopen03g004610 Solanum pennellii HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
PGSC0003DMG400014342 Solanum tuberosum HOM05D000607 ORTHO05D000518 6.9e-07 57.0 49 73.5
Thecc.03G177000 Theobroma cacao HOM05D000607 ORTHO05D000518 6.9e-07 57.0 70 57.1
TPR.G14333 Trifolium pratense HOM05D000071 ORTHO05D000029 6.9e-07 57.0 73 53.4
A06p34650 Brassica napus HOM05D000607 ORTHO05D000518 9.1e-07 56.6 51 68.6
C07p43850 Brassica napus HOM05D000607 ORTHO05D000518 9.1e-07 56.6 51 68.6
BolC7t44913H Brassica oleracea HOM05D000607 ORTHO05D000518 9.1e-07 56.6 51 68.6
BraA06t26392Z Brassica rapa HOM05D000607 ORTHO05D000518 9.1e-07 56.6 51 68.6
Carub.0006s2151 Capsella rubella HOM05D000607 ORTHO05D000518 9.1e-07 56.6 50 70.0
CARHR189770 Cardamine hirsuta HOM05D000607 ORTHO05D000518 9.1e-07 56.6 50 70.0
Duzib205G0442 Durio zibethinus HOM05D000607 ORTHO05D000518 9.1e-07 56.6 70 54.3
Psat6g198560 Pisum sativum HOM05D000607 ORTHO05D000518 9.1e-07 56.6 50 68.0
Sp2g23460 Schrenkiella parvula HOM05D000607 ORTHO05D000518 9.1e-07 56.6 50 70.0
Sed0010299 Sechium edule HOM05D000607 ORTHO05D000518 9.1e-07 56.6 71 52.1
Sc19g0001500 Simmondsia chinensis HOM05D000607 ORTHO05D000518 9.1e-07 56.6 50 68.0
GSVIVG01028974001 Vitis vinifera HOM05D000607 ORTHO05D000518 9.1e-07 56.6 70 55.7
Actinidia34115 Actinidia chinensis HOM05D000607 ORTHO05D000518 1.2e-06 56.2 71 53.5
A09p06780 Brassica napus HOM05D000607 ORTHO05D000518 1.2e-06 56.2 51 68.6
C09p07520 Brassica napus HOM05D000607 ORTHO05D000518 1.2e-06 56.2 51 68.6
BolC9t53667H Brassica oleracea HOM05D000607 ORTHO05D000518 1.2e-06 56.2 51 68.6
BraA09t36323Z Brassica rapa HOM05D000607 ORTHO05D000518 1.2e-06 56.2 51 68.6
Duzib068G0051 Durio zibethinus HOM05D000607 ORTHO05D000518 1.2e-06 56.2 73 50.7
ECA232G0205 Erigeron canadensis HOM05D000607 ORTHO05D000518 1.2e-06 56.2 50 70.0
Lalb_Chr03g0034561 Lupinus albus HOM05D000607 ORTHO05D000518 1.2e-06 56.2 70 52.9
Phvul.004G116400 Phaseolus vulgaris HOM05D000607 ORTHO05D000518 1.2e-06 56.2 70 54.3
VMungo0464G2180 Vigna mungo HOM05D000607 ORTHO05D000518 1.2e-06 56.2 70 54.3
arahy.Tifrunner.gnm1.ann1.N1W8DH Arachis hypogaea HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 52.9
arahy.Tifrunner.gnm1.ann1.QHK7TD Arachis hypogaea HOM05D000607 ORTHO05D000518 1.5e-06 55.8 71 52.1
Glyma.09G138600 Glycine max HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 52.9
Glyma.16G189302 Glycine max HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 52.9
Lj2g0016591 Lotus japonicus HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 52.9
Manes.06G147500 Manihot esculenta HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 54.3
Nitab4.5_0001842g0020 Nicotiana tabacum HOM05D000607 ORTHO05D000518 1.5e-06 55.8 49 71.4
Peaxi162Scf00444g00840 Petunia axillaris HOM05D000607 ORTHO05D000518 1.5e-06 55.8 49 71.4
SGA_v2.0_scaffold60G21045 Striga asiatica HOM05D000607 ORTHO05D000518 1.5e-06 55.8 70 55.7
vmacro06679 Vaccinium macrocarpon HOM05D000607 ORTHO05D000518 1.5e-06 55.8 50 70.0
AL6G35040 Arabidopsis lyrata HOM05D000607 ORTHO05D000518 2.0e-06 55.5 50 68.0
AT5G23760 Arabidopsis thaliana HOM05D000607 ORTHO05D000518 2.0e-06 55.5 50 68.0
MSTRG.8457 Avicennia marina HOM05D000607 ORTHO05D000518 2.0e-06 55.5 50 70.0
CSS0007996 Camellia sinensis var. sinensis HOM05D000607 ORTHO05D000518 2.0e-06 55.5 71 53.5
CSS0011803 Camellia sinensis var. sinensis HOM05D000607 ORTHO05D000518 2.0e-06 55.5 71 53.5
Gohir.A12G227300 Gossypium hirsutum HOM05D000607 ORTHO05D000518 2.0e-06 55.5 71 52.1
Oeu024221.1 Olea europaea HOM05D000607 ORTHO05D000518 2.0e-06 55.5 50 68.0
PGR031G3795 Punica granatum HOM05D000607 ORTHO05D000518 2.0e-06 55.5 72 51.4
arahy.Tifrunner.gnm1.ann1.S3TF80 Arachis hypogaea HOM05D000607 ORTHO05D000518 2.6e-06 55.1 73 50.7
CSS0049347 Camellia sinensis var. sinensis HOM05D000607 ORTHO05D000518 2.6e-06 55.1 71 47.9
Ciclev10023788m.g Citrus clementina HOM05D000607 ORTHO05D000518 2.6e-06 55.1 50 64.0
Dinv28439 Davidia involucrata HOM05D000607 ORTHO05D000518 2.6e-06 55.1 50 64.0
Dinv38957 Davidia involucrata HOM05D000607 ORTHO05D000518 2.6e-06 55.1 71 49.3
FvH4_7g29510 Fragaria vesca HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 55.7
FAN03G1315 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 55.7
FAN03G1886 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 55.7
FAN06G0737 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 55.7
FAN06G1071 Fragaria x ananassa HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 55.7
Lalb_Chr01g0009321 Lupinus albus HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 52.9
Medtr6g045257 Medicago truncatula HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 52.9
SalBow4G0149 Salvia bowleyana HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 57.1
SalBow4G2098 Salvia bowleyana HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 57.1
TPR.G10746 Trifolium pratense HOM05D000607 ORTHO05D000518 2.6e-06 55.1 70 52.9
MSTRG.91 Avicennia marina HOM05D000607 ORTHO05D000518 3.4e-06 54.7 72 54.2
Migut.F00338 Erythranthe guttata HOM05D000607 ORTHO05D000518 3.4e-06 54.7 70 55.7
Migut.F01118 Erythranthe guttata HOM05D000607 ORTHO05D000518 3.4e-06 54.7 74 51.4
FAN01G2376 Fragaria x ananassa HOM05D000607 ORTHO05D000518 3.4e-06 54.7 70 55.7
Psat7g192960 Pisum sativum HOM05D000607 ORTHO05D000518 3.4e-06 54.7 70 54.3
Potri.015G144200 Populus trichocarpa HOM05D000607 ORTHO05D000518 3.4e-06 54.7 70 54.3
CiPaw.03G106600 Carya illinoinensis HOM05D000607 ORTHO05D000518 4.5e-06 54.3 70 50.0
MBI18_g37164_MAGBIO Magnolia biondii HOM05D000607 ORTHO05D000518 4.5e-06 54.3 70 50.0
Potri.012G141500 Populus trichocarpa HOM05D000607 ORTHO05D000518 4.5e-06 54.3 50 66.0
TAR636G2948 Trochodendron aralioides HOM05D000607 ORTHO05D000518 4.5e-06 54.3 50 62.0
Atru.chr1.456 Acer truncatum HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 54.3
FAN10G2857 Fragaria x ananassa HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 54.3
FAN10G3783 Fragaria x ananassa HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 54.3
PSO478G3266 Papaver somniferum HOM05D000607 ORTHO05D000518 5.9e-06 53.9 50 60.0
PSO782G3265 Papaver somniferum HOM05D000607 ORTHO05D000518 5.9e-06 53.9 50 60.0
Psat7g192880 Pisum sativum HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 52.9
RcHm_v2.0_Chr1g0377351 Rosa chinensis HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 54.3
SGA_v2.0_scaffold44G16724 Striga asiatica HOM05D000607 ORTHO05D000518 5.9e-06 53.9 50 68.0
TWI14G0448 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 5.9e-06 53.9 70 54.3
Gohir.D12G229400 Gossypium hirsutum HOM05D000607 ORTHO05D000518 7.7e-06 53.5 71 50.7
Gorai.008G245700 Gossypium raimondii HOM05D000607 ORTHO05D000518 7.7e-06 53.5 71 50.7
MD07G1270100 Malus domestica HOM05D000607 ORTHO05D000518 7.7e-06 53.5 70 54.3
Prupe.2G294600 Prunus persica HOM05D000607 ORTHO05D000518 7.7e-06 53.5 70 54.3


User provided reference genes

Program Settings