Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G068800 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 2.5e-38 161.8 89 100.0
Glyma.10G237100 Glycine max HOM05D010814 ORTHO05D011500 4.5e-24 114.4 89 73.0
TPR.G14345 Trifolium pratense HOM05D010814 ORTHO05D011500 1.1e-17 93.2 89 65.2
Glyma.06G221500 Glycine max HOM05D010814 ORTHO05D011500 1.7e-15 85.9 89 58.4
arahy.Tifrunner.gnm1.ann1.XE2AGZ Arachis hypogaea HOM05D010814 ORTHO05D011500 8.6e-15 83.6 89 56.2
arahy.Tifrunner.gnm1.ann1.FHW390 Arachis hypogaea HOM05D010814 ORTHO05D011500 2.5e-14 82.0 89 56.2
Lj5g0013931 Lotus japonicus HOM05D010814 ORTHO05D011500 2.5e-14 82.0 89 59.6
Glyma.10G237150 Glycine max HOM05D010814 ORTHO05D011500 2.0e-11 72.4 91 58.2
Phvul.007G068400 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 2.0e-11 72.4 89 52.8
Medtr1g100733 Medicago truncatula HOM05D010814 ORTHO05D011500 3.4e-11 71.6 91 53.8
Lalb_Chr02g0140971 Lupinus albus HOM05D010814 ORTHO05D011500 2.8e-10 68.6 89 55.1
Lalb_Chr03g0034461 Lupinus albus HOM05D010814 ORTHO05D011500 1.4e-09 66.2 89 48.3
Phvul.007G068500 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 1.4e-09 66.2 89 49.4
arahy.Tifrunner.gnm1.ann1.9UZ7BM Arachis hypogaea HOM05D010814 ORTHO05D011500 3.1e-09 65.1 45 71.1
Phvul.007G068600 Phaseolus vulgaris HOM05D010814 ORTHO05D011500 9.2e-09 63.5 88 43.2
arahy.Tifrunner.gnm1.ann1.P4H4GE Arachis hypogaea HOM05D010814 ORTHO05D011500 2.7e-08 62.0 45 68.9
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 2.3e-07 58.9 93 45.2
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 2.5e-06 55.5 89 43.8
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 3.3e-06 55.1 82 37.8


User provided reference genes

Program Settings