Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 9.6e-104 380.2 194 100.0
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 2.0e-101 372.5 194 97.4
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 4.3e-96 354.8 194 92.3
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 9.7e-96 353.6 195 93.3
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 4.2e-91 338.2 194 88.7
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 3.0e-89 332.0 194 87.1
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 5.1e-89 331.3 194 83.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 1.1e-86 323.6 194 83.5
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.1e-86 323.6 194 84.5
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 1.4e-86 323.2 194 82.0
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 1.8e-86 322.8 193 82.9
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 3.1e-86 322.0 194 83.0
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 5.9e-85 317.8 194 79.4
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 7.7e-85 317.4 195 82.6
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 1.3e-84 316.6 194 78.4
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 3.2e-83 312.0 194 79.9
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.2e-82 310.1 194 79.9
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 1.2e-82 310.1 194 79.4
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 2.7e-82 308.9 194 78.4
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 6.1e-82 307.8 194 78.9
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 1.8e-81 306.2 194 79.9
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 2.3e-81 305.8 194 80.9
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 3.0e-81 305.4 195 78.5
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 5.1e-81 304.7 195 79.0
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 5.1e-81 304.7 195 79.0
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 5.1e-81 304.7 194 80.4
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 5.1e-81 304.7 194 78.9
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 6.7e-81 304.3 195 79.0
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 6.7e-81 304.3 194 80.4
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.6e-80 302.4 195 77.9
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.3e-80 302.0 194 79.9
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 5.7e-80 301.2 195 77.9
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 5.7e-80 301.2 196 78.6
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 5.7e-80 301.2 196 76.0
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 5.7e-80 301.2 194 77.3
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.3e-79 300.1 195 79.0
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 4.8e-79 298.1 194 78.9
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 8.2e-79 297.4 196 76.0
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 3.1e-78 295.4 194 74.7
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 5.3e-78 294.7 194 75.8
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.2e-77 293.5 194 75.3
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 1.7e-76 289.7 195 73.8
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 2.9e-76 288.9 195 77.4
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 8.5e-76 287.3 194 72.7
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.1e-75 287.0 194 72.7
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 1.5e-75 286.6 194 72.7
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.5e-75 286.6 194 72.7
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 1.5e-75 286.6 195 72.3
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 4.2e-75 285.0 198 71.2
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 9.4e-75 283.9 194 72.2
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 6.1e-74 281.2 194 72.7
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 4.0e-73 278.5 197 72.6
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 6.7e-73 277.7 196 71.4
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 8.8e-73 277.3 195 73.3
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 8.8e-73 277.3 194 73.2
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 1.5e-72 276.6 195 74.4
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 2.0e-72 276.2 194 73.7
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 3.3e-72 275.4 194 73.2
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.3e-71 273.5 199 69.8
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.7e-71 273.1 194 71.6
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 2.2e-71 272.7 194 70.1
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 4.8e-71 271.6 194 71.1
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 6.3e-71 271.2 196 70.4
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 1.1e-70 270.4 194 69.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 5.3e-70 268.1 194 71.1
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 9.1e-70 267.3 194 69.1
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 1.2e-69 266.9 194 71.1
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 1.6e-69 266.5 195 71.8
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 2.0e-69 266.2 199 68.8
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 5.9e-69 264.6 195 70.8
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 7.7e-69 264.2 197 67.0
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.3e-68 263.5 194 69.1
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 1.3e-68 263.5 194 69.1
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 3.8e-68 261.9 193 67.4
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 2.5e-67 259.2 193 67.9
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 2.5e-67 259.2 195 68.2
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.5e-67 259.2 195 69.2
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 3.6e-66 255.4 194 68.0
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 6.1e-66 254.6 198 65.7
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 8.0e-66 254.2 198 66.7
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 1.8e-65 253.1 195 68.2
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 3.4e-64 248.8 184 70.1
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.4e-64 248.8 194 64.4
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 5.7e-64 248.1 213 62.0
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 1.4e-62 243.4 212 60.8
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 3.1e-62 242.3 194 64.9
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 5.4e-62 241.5 198 64.1
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 7.0e-62 241.1 194 65.5
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 6.1e-58 228.0 199 58.8
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.4e-57 226.9 178 65.2
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.2e-56 223.8 194 60.8
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.1e-54 217.2 202 57.9
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 4.1e-54 215.3 178 60.7
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 7.0e-54 214.5 143 75.5
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 1.3e-52 210.3 194 56.7
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.9e-52 209.1 183 61.2
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 5.2e-49 198.4 199 53.3
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 4.3e-43 178.7 142 65.5
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.2e-42 177.2 193 50.8
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.2e-40 170.6 145 61.4
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.0e-40 169.9 206 46.1
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 1.3e-39 167.2 129 66.7
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 5.4e-38 161.8 170 54.1
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 7.8e-29 131.3 89 69.7
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.7e-23 113.6 93 61.3
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 3.2e-22 109.4 145 46.2
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 4.1e-22 109.0 60 95.0
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 2.4e-17 93.2 93 57.0
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 8.9e-17 91.3 93 55.9
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 9.9e-16 87.8 47 87.2
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.3e-15 87.4 140 37.1
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 7.1e-14 81.6 100 50.0
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.2e-13 80.9 70 57.1
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.9e-12 75.9 69 56.5
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.9e-12 75.9 69 56.5
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.9e-12 75.9 69 58.0
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.9e-12 75.9 69 56.5
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.6e-12 75.1 64 59.4
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 2.5e-11 73.2 69 55.1
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.3e-11 72.8 69 55.1
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 8.1e-10 68.2 103 47.6
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 2.6e-08 63.2 49 65.3
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 2.6e-08 63.2 49 65.3


User provided reference genes

Program Settings