Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 6.3e-140 500.7 248 100.0
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 2.6e-125 452.2 236 94.9
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.3e-124 449.9 248 89.9
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 4.1e-115 418.3 238 84.5
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 4.1e-115 418.3 248 84.3
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 4.8e-108 394.8 239 81.6
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 2.7e-106 389.0 239 80.3
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 3.5e-106 388.7 235 81.7
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 4.2e-104 381.7 246 76.8
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 1.6e-103 379.8 245 77.6
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 1.6e-103 379.8 236 80.1
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.8e-102 376.3 239 77.0
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 3.0e-102 375.6 246 76.0
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 4.0e-102 375.2 244 76.2
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 8.8e-102 374.0 250 74.8
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 2.0e-101 372.9 245 75.9
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 9.8e-101 370.5 241 76.8
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.7e-100 369.8 240 75.8
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.7e-100 368.6 242 74.4
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 3.7e-100 368.6 238 76.5
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.8e-99 366.3 248 73.4
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 2.4e-99 365.9 241 75.9
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 3.1e-99 365.5 243 74.5
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.4e-99 364.8 250 74.4
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 1.2e-98 363.6 241 74.7
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.6e-98 363.2 255 72.5
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-98 363.2 241 75.1
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 2.0e-98 362.8 208 83.2
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 2.7e-98 362.5 241 74.3
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 4.5e-98 361.7 239 76.2
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 7.7e-98 360.9 240 74.6
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.0e-97 360.5 239 75.3
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.7e-97 359.8 244 74.2
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 2.3e-97 359.4 241 75.1
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.3e-97 359.4 237 73.8
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 3.8e-97 358.6 246 72.0
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 6.6e-97 357.8 241 73.4
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 8.6e-97 357.5 245 73.9
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 1.1e-96 357.1 240 72.5
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.5e-96 356.7 241 72.2
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.9e-96 356.3 242 73.1
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.9e-96 356.3 221 77.4
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 3.3e-96 355.5 245 73.5
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 5.5e-96 354.8 242 72.3
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 7.2e-96 354.4 206 86.9
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 1.2e-95 353.6 238 70.2
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 2.8e-95 352.4 242 71.1
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 4.7e-95 351.7 244 72.1
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 4.7e-95 351.7 237 71.7
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 6.1e-95 351.3 250 71.6
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 8.0e-95 350.9 239 72.4
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 8.0e-95 350.9 231 72.7
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 1.0e-94 350.5 239 73.6
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 1.4e-94 350.1 241 73.0
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 6.8e-94 347.8 243 71.6
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 2.0e-93 346.3 221 74.7
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 1.7e-92 343.2 307 59.3
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.7e-92 343.2 250 70.4
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 2.2e-92 342.8 240 70.8
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 4.9e-92 341.7 243 70.4
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 4.9e-92 341.7 240 70.4
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 8.3e-92 340.9 239 69.9
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 2.4e-91 339.3 241 68.9
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 3.1e-91 339.0 243 70.0
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 5.4e-91 338.2 243 69.1
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 1.2e-90 337.0 201 79.6
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.2e-90 337.0 231 71.4
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.7e-90 335.9 226 72.6
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 2.7e-90 335.9 239 69.0
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 3.5e-90 335.5 240 70.8
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 4.5e-90 335.1 239 68.6
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 5.9e-90 334.7 240 69.6
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 5.9e-90 334.7 211 73.9
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 7.8e-90 334.3 221 74.2
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.0e-89 334.0 245 68.6
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 1.9e-88 329.7 221 72.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.9e-88 329.7 232 70.3
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 2.5e-88 329.3 240 67.1
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 1.2e-87 327.0 234 68.4
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.6e-87 326.6 221 71.0
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 2.1e-87 326.2 233 69.1
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 6.1e-87 324.7 244 67.6
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 6.1e-87 324.7 225 70.2
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 8.0e-87 324.3 231 68.4
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 4.0e-86 322.0 221 70.6
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 5.2e-86 321.6 250 66.4
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 6.8e-86 321.2 226 70.4
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 1.2e-85 320.5 243 68.7
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 1.2e-85 320.5 243 68.7
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 2.0e-85 319.7 237 69.2
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 4.4e-85 318.5 244 66.8
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 4.4e-85 318.5 244 66.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 4.9e-84 315.1 240 65.8
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 6.4e-84 314.7 232 66.4
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 1.1e-83 313.9 198 76.3
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 3.0e-81 305.8 198 74.2
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 3.0e-81 305.8 234 64.1
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 3.9e-81 305.4 223 65.5
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 3.9e-81 305.4 227 67.4
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 8.6e-81 304.3 198 74.7
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 1.4e-78 297.0 240 62.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 5.2e-78 295.0 221 66.5
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.3e-76 290.4 200 72.0
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 2.4e-75 286.2 181 75.7
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 2.0e-69 266.5 198 65.2
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 9.9e-69 264.2 196 66.8
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 5.4e-67 258.5 214 61.2
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 1.6e-66 256.9 267 56.2
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 4.3e-64 248.8 224 54.9
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 1.4e-62 243.8 141 83.7
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 4.4e-61 238.8 223 52.5
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 2.4e-59 233.0 147 74.8
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 2.3e-57 226.5 217 55.8
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.2e-55 220.7 221 52.0
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 1.1e-54 217.6 188 59.0
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 2.9e-52 209.5 196 55.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.1e-50 203.4 132 75.0
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 3.9e-33 146.0 187 44.9
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 1.1e-27 127.9 211 37.0
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.1e-26 123.6 93 67.7
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 6.1e-26 122.1 280 31.8
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 3.4e-21 106.3 205 33.7
PRCOL_00006636 Prasinoderma coloniale HOM05D006286 ORTHO05D007741 5.9e-21 105.5 187 37.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 1.1e-14 84.7 80 57.5
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.4e-14 84.3 49 81.6
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 1.1e-11 74.7 49 71.4
SEGI_15131 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 2.8e-07 60.1 33 75.8


User provided reference genes

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