Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 6.5e-232 807.0 396 100.0
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 8.6e-200 700.3 396 88.1
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 1.9e-175 619.4 403 80.1
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 9.6e-159 563.9 401 72.3
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 1.7e-155 553.1 398 71.6
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 1.2e-148 530.4 397 67.8
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 8.2e-134 481.1 321 73.8
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 1.3e-131 473.8 335 69.6
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 4.5e-124 448.7 324 67.6
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 3.1e-109 399.4 298 65.8
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 3.1e-109 399.4 295 66.8
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 2.0e-108 396.7 293 63.8
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 1.3e-107 394.0 298 65.8
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 3.2e-106 389.4 305 65.9
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 4.7e-105 385.6 381 55.4
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 8.0e-105 384.8 350 56.0
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.0e-104 384.4 299 62.9
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 1.8e-104 383.6 309 61.8
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 2.3e-104 383.3 292 64.7
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 3.0e-104 382.9 292 64.7
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 4.0e-104 382.5 299 62.9
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 4.0e-104 382.5 297 64.6
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 5.2e-104 382.1 293 64.5
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 6.8e-104 381.7 298 65.1
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 6.8e-104 381.7 401 52.1
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.2e-103 380.9 292 64.4
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 7.5e-103 378.3 295 63.7
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.3e-102 377.5 296 61.5
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.3e-102 377.5 363 55.4
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.3e-102 377.5 295 63.4
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.7e-102 377.1 294 64.3
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 1.4e-101 374.0 299 62.9
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 2.4e-101 373.2 295 62.7
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 3.1e-101 372.9 296 61.8
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 5.4e-101 372.1 295 62.0
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 2.9e-99 366.3 296 62.5
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 2.9e-99 366.3 342 56.7
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 1.1e-98 364.4 292 59.9
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 9.5e-98 361.3 290 59.3
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 1.2e-97 360.9 283 62.9
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.6e-97 360.5 294 59.2
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 8.0e-97 358.2 285 60.7
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 1.8e-96 357.1 299 58.5
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 2.3e-96 356.7 275 64.4
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 8.9e-96 354.8 298 57.4
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.5e-95 354.0 286 59.4
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 3.4e-95 352.8 286 59.1
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 5.7e-95 352.1 285 57.9
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 9.8e-95 351.3 303 59.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 2.8e-94 349.7 293 58.7
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 2.8e-94 349.7 299 60.5
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 4.9e-94 349.0 273 61.2
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 8.3e-94 348.2 296 59.1
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.4e-93 347.4 304 58.2
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 2.4e-93 346.7 293 59.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 3.1e-93 346.3 342 52.3
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 4.1e-93 345.9 285 58.6
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 4.1e-93 345.9 295 61.0
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 7.0e-93 345.1 283 59.0
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 9.2e-93 344.7 289 57.1
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 1.6e-92 344.0 314 53.8
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 5.9e-92 342.0 297 56.2
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 7.8e-92 341.7 293 56.7
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.3e-91 340.9 291 59.1
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.3e-91 340.9 289 59.5
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 2.9e-91 339.7 299 55.5
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 3.9e-91 339.3 314 53.5
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 3.9e-91 339.3 324 52.5
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 5.0e-91 339.0 302 57.3
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 1.5e-90 337.4 386 47.2
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 5.6e-90 335.5 291 58.1
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 5.6e-90 335.5 291 58.1
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 5.2e-88 328.9 408 46.3
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 8.9e-88 328.2 297 55.9
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 1.5e-87 327.4 295 56.3
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 5.8e-87 325.5 295 58.0
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 6.4e-86 322.0 300 54.7
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 1.1e-85 321.2 298 53.7
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 5.4e-85 318.9 297 57.2
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 1.2e-84 317.8 326 50.6
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 2.7e-84 316.6 296 57.1
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 3.5e-84 316.2 324 54.3
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 8.0e-81 305.1 304 52.3
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 1.1e-80 304.7 272 55.1
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 2.9e-78 296.6 214 65.0
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 2.9e-78 296.6 235 60.0
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 3.3e-74 283.1 247 56.3
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 2.8e-73 280.0 295 50.2
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 2.9e-70 270.0 298 48.3
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 2.4e-69 266.9 212 60.8
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 9.2e-69 265.0 300 46.0
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.4e-56 223.8 415 35.7
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 3.4e-55 219.9 346 39.9
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 1.6e-52 211.1 339 38.1
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 1.2e-44 184.9 296 35.8
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.0e-44 182.6 155 54.8
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 1.3e-43 181.4 162 56.8
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 5.6e-42 176.0 374 34.2
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.0e-39 167.5 169 51.5
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 3.2e-37 160.2 295 32.9
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 1.5e-34 151.4 153 55.6
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 1.3e-30 138.3 87 74.7
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.2e-29 133.7 133 52.6
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 3.7e-25 120.2 101 59.4
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 3.4e-23 113.6 247 31.2
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 1.9e-21 107.8 84 59.5
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 3.9e-19 100.1 135 43.0
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 7.7e-15 85.9 271 25.8
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.5e-07 61.6 34 73.5
Lalb_Chr16g0388181 Lupinus albus HOM05D007297 ORTHO05D009352 2.2e-06 57.8 37 75.7


User provided reference genes

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