Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G058100 Phaseolus vulgaris HOM05D005574 ORTHO05D007102 1.1e-198 696.4 354 100.0
VMungo0720G0566 Vigna mungo HOM05D005574 ORTHO05D007102 1.0e-167 593.6 357 84.9
Glyma.10G247300 Glycine max HOM05D005574 ORTHO05D007102 3.6e-149 531.9 356 77.5
Glyma.20G147200 Glycine max HOM05D005574 ORTHO05D007102 8.1e-149 530.8 356 78.4
arahy.Tifrunner.gnm1.ann1.R5YE9W Arachis hypogaea HOM05D005574 ORTHO05D007102 9.3e-113 411.0 344 63.4
Lj5g0023935 Lotus japonicus HOM05D005574 ORTHO05D007102 1.2e-112 410.6 367 60.8
arahy.Tifrunner.gnm1.ann1.PUQJ4X Arachis hypogaea HOM05D005574 ORTHO05D007102 2.1e-112 409.8 347 63.1
Ca_10888_v3 Cicer arietinum L. HOM05D005574 ORTHO05D007102 1.5e-107 393.7 365 58.9
TPR.G5479 Trifolium pratense HOM05D005574 ORTHO05D007102 1.0e-106 391.0 357 60.2
Medtr1g103560 Medicago truncatula HOM05D005574 ORTHO05D007102 2.3e-103 379.8 364 57.7
QL06p002087 Quercus lobata HOM05D005574 ORTHO05D007102 3.9e-103 379.0 341 58.1
Prupe.1G015700 Prunus persica HOM05D005574 ORTHO05D007102 6.9e-100 368.2 339 58.4
Psat6g206920 Pisum sativum HOM05D005574 ORTHO05D007102 3.4e-99 365.9 350 55.7
Cfa015664 Carpinus fangiana HOM05D005574 ORTHO05D007102 5.9e-99 365.2 343 56.9
Haze_00883 Corylus avellana HOM05D005574 ORTHO05D007102 1.3e-98 364.0 349 55.9
MD16G1195700 Malus domestica HOM05D005574 ORTHO05D007102 4.6e-96 355.5 340 55.6
RcHm_v2.0_Chr4g0415861 Rosa chinensis HOM05D005574 ORTHO05D007102 6.1e-96 355.1 347 53.6
MD13G1194900 Malus domestica HOM05D005574 ORTHO05D007102 1.9e-94 350.1 340 56.5
FAN07G2976 Fragaria x ananassa HOM05D005574 ORTHO05D007102 1.7e-93 347.1 345 54.2
Thecc.04G192400 Theobroma cacao HOM05D005574 ORTHO05D007102 2.8e-93 346.3 349 52.1
CiPaw.02G098000 Carya illinoinensis HOM05D005574 ORTHO05D007102 3.7e-93 345.9 352 53.7
Ciclev10005241m.g Citrus clementina HOM05D005574 ORTHO05D007102 8.2e-93 344.7 346 53.8
Lalb_Chr02g0140631 Lupinus albus HOM05D005574 ORTHO05D007102 1.4e-92 344.0 364 54.4
GSVIVG01017997001 Vitis vinifera HOM05D005574 ORTHO05D007102 1.4e-92 344.0 341 53.1
FAN02G2947 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.1e-92 342.4 344 53.2
FvH4_4g16270 Fragaria vesca HOM05D005574 ORTHO05D007102 4.5e-91 339.0 344 52.6
FAN12G0525 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-91 339.0 344 52.6
FAN12G2145 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-91 339.0 344 52.6
FAN12G2997 Fragaria x ananassa HOM05D005574 ORTHO05D007102 4.5e-91 339.0 344 52.6
TWI53G0495 Tripterygium wilfordii HOM05D005574 ORTHO05D007102 1.3e-90 337.4 345 52.8
Atru.chr4.2447 Acer truncatum HOM05D005574 ORTHO05D007102 1.9e-89 333.6 356 51.4
CANSAT78G2217 Cannabis sativa HOM05D005574 ORTHO05D007102 6.1e-88 328.6 336 53.0
CSS0019466 Camellia sinensis var. sinensis HOM05D005574 ORTHO05D007102 1.4e-87 327.4 334 50.6
COL.COLO4_05700 Corchorus olitorius HOM05D005574 ORTHO05D007102 1.4e-87 327.4 352 50.3
Duzib268G0255 Durio zibethinus HOM05D005574 ORTHO05D007102 1.8e-87 327.0 361 51.0
Potri.010G086100 Populus trichocarpa HOM05D005574 ORTHO05D007102 1.7e-85 320.5 341 51.9
Nn6g34090 Nelumbo nucifera HOM05D005574 ORTHO05D007102 2.8e-85 319.7 321 50.8
Sed0027704 Sechium edule HOM05D005574 ORTHO05D007102 9.1e-84 314.7 343 48.1
Peaxi162Scf00092g00614 Petunia axillaris HOM05D005574 ORTHO05D007102 1.2e-83 314.3 352 50.6
Cc03_g03930 Coffea canephora HOM05D005574 ORTHO05D007102 4.5e-83 312.4 349 50.7
TAR362G0087 Trochodendron aralioides HOM05D005574 ORTHO05D007102 5.9e-83 312.0 353 49.3
Dinv44545 Davidia involucrata HOM05D005574 ORTHO05D007102 3.8e-82 309.3 333 52.6
MELO3C006525.2 Cucumis melo HOM05D005574 ORTHO05D007102 5.0e-82 308.9 323 48.9
CsaV3_3G013190 Cucumis sativus L. HOM05D005574 ORTHO05D007102 5.0e-82 308.9 341 46.6
Sabra10G0057600 Salix brachista HOM05D005574 ORTHO05D007102 1.1e-81 307.8 342 51.8
ClCG05G005090 Citrullus lanatus HOM05D005574 ORTHO05D007102 9.4e-81 304.7 341 46.3
Gorai.011G151700 Gossypium raimondii HOM05D005574 ORTHO05D007102 6.1e-80 302.0 359 50.1
Nitab4.5_0004135g0020 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.4e-79 300.8 345 49.0
Sopen09g031060 Solanum pennellii HOM05D005574 ORTHO05D007102 5.2e-79 298.9 351 47.9
Gohir.A10G129500 Gossypium hirsutum HOM05D005574 ORTHO05D007102 6.7e-79 298.5 346 50.9
Nitab4.5_0001920g0060 Nicotiana tabacum HOM05D005574 ORTHO05D007102 1.1e-78 297.7 349 50.4
Sed0003604 Sechium edule HOM05D005574 ORTHO05D007102 1.7e-77 293.9 324 49.1
Solyc09g082180.3 Solanum lycopersicum HOM05D005574 ORTHO05D007102 1.7e-77 293.9 329 48.9
Actinidia23520 Actinidia chinensis HOM05D005574 ORTHO05D007102 8.2e-77 291.6 334 48.2
Gohir.D10G136700 Gossypium hirsutum HOM05D005574 ORTHO05D007102 1.1e-76 291.2 359 49.6
Aqoxy2G03411 Aquilegia oxysepala HOM05D005574 ORTHO05D007102 5.3e-76 288.9 355 45.4
Manes.03G177100 Manihot esculenta HOM05D005574 ORTHO05D007102 5.3e-76 288.9 323 49.5
Oeu058969.1 Olea europaea HOM05D005574 ORTHO05D007102 9.1e-76 288.1 328 49.7
Rhsim04G0201500 Rhododendron simsii HOM05D005574 ORTHO05D007102 1.6e-75 287.3 347 47.6
DCAR_030644 Daucus carota HOM05D005574 ORTHO05D007102 2.6e-75 286.6 351 45.6
Hma1.2p1_0602F.1_g187410 Hydrangea macrophylla HOM05D005574 ORTHO05D007102 1.7e-74 283.9 343 47.2
Dinv14005 Davidia involucrata HOM05D005574 ORTHO05D007102 2.5e-73 280.0 342 50.0
THA.LOC104800960 Tarenaya hassleriana HOM05D005574 ORTHO05D007102 3.6e-72 276.2 348 42.8
PSO210G4004 Papaver somniferum HOM05D005574 ORTHO05D007102 4.7e-72 275.8 330 46.4
MSTRG.4036 Avicennia marina HOM05D005574 ORTHO05D007102 1.0e-71 274.6 335 46.3
Thhalv10002568m.g Eutrema salsugineum HOM05D005574 ORTHO05D007102 7.5e-70 268.5 345 41.2
SGA_v2.0_scaffold257G45710 Striga asiatica HOM05D005574 ORTHO05D007102 8.2e-69 265.0 321 43.9
AL1G15280 Arabidopsis lyrata HOM05D005574 ORTHO05D007102 1.4e-68 264.2 349 43.0
MSTRG.9977 Avicennia marina HOM05D005574 ORTHO05D007102 3.1e-68 263.1 338 44.4
Eucgr.B01081 Eucalyptus grandis HOM05D005574 ORTHO05D007102 4.1e-68 262.7 307 47.9
Hund12118 Selenicereus undatus HOM05D005574 ORTHO05D007102 4.1e-68 262.7 319 46.4
SalBow2G1029 Salvia bowleyana HOM05D005574 ORTHO05D007102 1.6e-67 260.8 319 43.6
PSO761G0453 Papaver somniferum HOM05D005574 ORTHO05D007102 1.0e-66 258.1 330 44.5
AUR62034712 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.9e-66 256.5 367 42.8
Duzib151G0572 Durio zibethinus HOM05D005574 ORTHO05D007102 3.8e-66 256.1 307 47.6
Migut.G00347 Erythranthe guttata HOM05D005574 ORTHO05D007102 1.1e-65 254.6 330 44.5
BcaC05g24386 Brassica carinata HOM05D005574 ORTHO05D007102 1.5e-65 254.2 324 44.4
C05p03780 Brassica napus HOM05D005574 ORTHO05D007102 1.5e-65 254.2 324 44.4
BolC5t29155H Brassica oleracea HOM05D005574 ORTHO05D007102 1.5e-65 254.2 324 44.4
Sp1g04310 Schrenkiella parvula HOM05D005574 ORTHO05D007102 2.5e-65 253.4 348 40.5
Ah.13g071610 Amaranthus hybridus HOM05D005574 ORTHO05D007102 1.6e-64 250.8 359 41.2
A10p04140 Brassica napus HOM05D005574 ORTHO05D007102 1.4e-63 247.7 322 43.8
BraA10t42684Z Brassica rapa HOM05D005574 ORTHO05D007102 1.4e-63 247.7 322 43.8
EL10Ac3g06494 Beta vulgaris HOM05D005574 ORTHO05D007102 2.3e-63 246.9 356 40.7
BcaB02g06860 Brassica carinata HOM05D005574 ORTHO05D007102 8.8e-63 245.0 340 40.9
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.5e-62 244.2 319 41.1
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 9.8e-62 241.5 308 45.5
Lsat_1_v5_gn_5_104360 Lactuca sativa HOM05D005574 ORTHO05D007102 1.3e-61 241.1 335 43.0
CARHR004930 Cardamine hirsuta HOM05D005574 ORTHO05D007102 3.7e-61 239.6 320 42.2
Carub.0001s0477 Capsella rubella HOM05D005574 ORTHO05D007102 6.3e-61 238.8 349 38.4
AUR62033680 Chenopodium quinoa HOM05D005574 ORTHO05D007102 2.4e-60 236.9 311 45.0
PGR142G0953 Punica granatum HOM05D005574 ORTHO05D007102 2.0e-59 233.8 352 43.2
Potri.008G154400 Populus trichocarpa HOM05D005574 ORTHO05D007102 2.5e-57 226.9 244 54.1
HanXRQChr10g0294751 Helianthus annuus HOM05D005574 ORTHO05D007102 2.1e-56 223.8 331 40.8
CAN.G2204.2 Capsicum annuum HOM05D000340 ORTHO05D007102 1.5e-54 217.6 208 51.9
CDE07G0532 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 1.8e-52 210.7 325 39.1
AT1G05440 Arabidopsis thaliana HOM05D005574 ORTHO05D007102 3.1e-52 209.9 352 37.2
ECA234G0493 Erigeron canadensis HOM05D005574 ORTHO05D007102 9.2e-52 208.4 298 42.6
MBI15_g31435_MAGBIO Magnolia biondii HOM05D005574 ORTHO05D007102 3.3e-49 199.9 256 44.1
ATR0697G187 Amborella trichopoda HOM05D005574 ORTHO05D007102 2.3e-47 193.7 318 36.5
CAN.G2204.4 Capsicum annuum HOM05D005574 ORTHO05D007102 1.5e-46 191.0 225 50.7
HPP92_009613 Vanilla planifolia HOM05D005574 ORTHO05D007102 3.7e-45 186.4 329 36.2
CDE06G2673 Ceratophyllum demersum HOM05D005574 ORTHO05D007102 7.3e-41 172.2 250 41.6
SEGI_38250 Sequoiadendron giganteum HOM05D005574 ORTHO05D007102 7.3e-41 172.2 338 31.1
unitig_32.g11728 Utricularia gibba HOM05D005574 ORTHO05D007102 1.7e-37 161.0 351 33.9
Zm00001eb057090 Zea mays HOM05D005574 ORTHO05D007102 2.2e-37 160.6 316 34.5
Os03g0747100 Oryza sativa ssp. japonica HOM05D005574 ORTHO05D007102 1.2e-35 154.8 332 34.0
Cpa.g.sc58.90 Carica papaya HOM05D005574 ORTHO05D007102 3.9e-34 149.8 131 51.9
Actinidia40140 Actinidia chinensis HOM05D005574 ORTHO05D007102 1.5e-33 147.9 139 49.6
ECA234G4095 Erigeron canadensis HOM05D005574 ORTHO05D007102 3.3e-33 146.7 160 46.9
SMO174G0025 Selaginella moellendorffii HOM05D005574 ORTHO05D007102 1.1e-31 141.7 304 30.6
BolC1t04542H Brassica oleracea HOM05D005574 ORTHO05D007102 6.8e-31 139.0 235 32.8
BolC5t33236H Brassica oleracea HOM05D005574 ORTHO05D007102 1.5e-30 137.9 198 36.4
C01p35960 Brassica napus HOM05D005574 ORTHO05D007102 7.5e-30 135.6 155 40.0
C03p05690 Brassica napus HOM05D005574 ORTHO05D022054 3.3e-25 120.2 103 50.5
AagrBONN_evm.TU.Sc2ySwM_117.3111 Anthoceros agrestis HOM05D005574 ORTHO05D007102 1.7e-21 107.8 274 29.6
BolC1t03554H Brassica oleracea HOM05D005574 ORTHO05D022054 3.8e-21 106.7 94 48.9
BcaC09g49493 Brassica carinata HOM05D005574 ORTHO05D007102 1.5e-17 94.7 146 37.7
A02p27770 Brassica napus HOM05D005574 ORTHO05D007102 2.5e-17 94.0 109 41.3
BraA02t07818Z Brassica rapa HOM05D005574 ORTHO05D007102 2.5e-17 94.0 109 41.3
BolC3t13081H Brassica oleracea HOM05D005574 ORTHO05D007102 5.6e-17 92.8 108 41.7
BraA07t27929Z Brassica rapa HOM05D005574 ORTHO05D007102 7.3e-17 92.4 109 39.4
A03p47670 Brassica napus HOM05D005574 ORTHO05D007102 9.6e-17 92.0 108 40.7
BraA09t37853Z Brassica rapa HOM05D005574 ORTHO05D007102 9.6e-17 92.0 108 40.7
BcaC07g42131 Brassica carinata HOM05D005574 ORTHO05D007102 3.6e-16 90.1 103 39.8
C08p51720 Brassica napus HOM05D005574 ORTHO05D007102 3.6e-16 90.1 103 39.8
BcaB07g33702 Brassica carinata HOM05D005574 ORTHO05D007102 6.2e-16 89.4 197 30.5
BraA09t41109Z Brassica rapa HOM05D005574 ORTHO05D007102 1.1e-15 88.6 85 49.4
A09p67440 Brassica napus HOM05D005574 ORTHO05D007102 9.0e-15 85.5 90 43.3
A09p57160 Brassica napus HOM05D005574 ORTHO05D007102 1.7e-13 81.3 61 57.4
BcaC09g48798 Brassica carinata HOM05D005574 ORTHO05D007102 3.8e-13 80.1 98 38.8
C01p45800 Brassica napus HOM05D005574 ORTHO05D007102 2.4e-12 77.4 156 28.2
Sabra08G0117800 Salix brachista HOM05D000633 ORTHO05D000477 1.1e-09 68.6 68 47.1
Glyma.19G163100 Glycine max HOM05D005574 ORTHO05D214454 1.6e-08 64.7 61 62.3
BcaC07g42130 Brassica carinata HOM05D005574 ORTHO05D007102 7.6e-06 55.8 81 34.6


User provided reference genes

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