Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G047500 Phaseolus vulgaris HOM05D005311 ORTHO05D006160 3.1e-119 431.8 218 100.0
Glyma.10G255200 Glycine max HOM05D005311 ORTHO05D006160 4.7e-107 391.3 218 92.7
Glyma.20G136100 Glycine max HOM05D005311 ORTHO05D006160 1.5e-100 369.8 218 89.0
Ca_11020_v3 Cicer arietinum L. HOM05D005311 ORTHO05D006160 2.6e-89 332.4 222 80.6
Medtr1g105970 Medicago truncatula HOM05D005311 ORTHO05D006160 8.3e-88 327.4 220 79.5
Lalb_Chr21g0307981 Lupinus albus HOM05D005311 ORTHO05D006160 1.6e-86 323.2 219 77.2
arahy.Tifrunner.gnm1.ann1.KVB0K0 Arachis hypogaea HOM05D005311 ORTHO05D006160 8.6e-85 317.4 230 74.3
Lalb_Chr02g0144871 Lupinus albus HOM05D005311 ORTHO05D006160 7.3e-84 314.3 219 76.7
Lj5g0014269 Lotus japonicus HOM05D005311 ORTHO05D006160 1.6e-83 313.2 219 76.3
VMungo0720G0066 Vigna mungo HOM05D005311 ORTHO05D006160 2.3e-77 292.7 154 96.8
Lalb_Chr16g0376301 Lupinus albus HOM05D005311 ORTHO05D006160 1.3e-69 266.9 218 67.9
arahy.Tifrunner.gnm1.ann1.QK2693 Arachis hypogaea HOM05D005311 ORTHO05D006160 6.2e-67 258.1 155 83.9
GSVIVG01037044001 Vitis vinifera HOM05D005311 ORTHO05D006160 2.4e-66 256.1 217 66.8
CiPaw.05G021200 Carya illinoinensis HOM05D005311 ORTHO05D006160 5.3e-66 255.0 221 62.4
Atru.chr5.2262 Acer truncatum HOM05D005311 ORTHO05D006160 2.9e-64 249.2 214 63.1
COL.COLO4_32478 Corchorus olitorius HOM05D005311 ORTHO05D006160 8.4e-64 247.7 219 60.3
Potri.009G084800 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.9e-63 246.5 223 62.3
Duzib052G0370 Durio zibethinus HOM05D005311 ORTHO05D006160 5.4e-63 245.0 219 61.2
CSS0009611 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 7.1e-63 244.6 220 62.3
Manes.07G056400 Manihot esculenta HOM05D005311 ORTHO05D006160 9.3e-63 244.2 217 63.1
Rhsim11G0150000 Rhododendron simsii HOM05D005311 ORTHO05D006160 3.5e-62 242.3 223 60.5
Thecc.02G120600 Theobroma cacao HOM05D005311 ORTHO05D006160 3.5e-62 242.3 218 58.7
Gohir.A03G180600 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.8e-61 240.0 218 58.7
MD05G1106900 Malus domestica HOM05D005311 ORTHO05D006160 2.3e-61 239.6 222 59.9
Gohir.D12G019000 Gossypium hirsutum HOM05D005311 ORTHO05D006160 5.1e-61 238.4 221 57.5
Gorai.008G019300 Gossypium raimondii HOM05D005311 ORTHO05D006160 5.1e-61 238.4 218 57.8
Gohir.D02G203104 Gossypium hirsutum HOM05D005311 ORTHO05D006160 6.7e-61 238.0 218 58.3
Aqoxy5G01939 Aquilegia oxysepala HOM05D005311 ORTHO05D006160 1.1e-60 237.3 169 70.4
Gohir.A12G018400 Gossypium hirsutum HOM05D005311 ORTHO05D006160 1.1e-60 237.3 221 57.9
MD10G1111900 Malus domestica HOM05D005311 ORTHO05D006160 1.1e-60 237.3 219 59.8
TAR376G1236 Trochodendron aralioides HOM05D000442 ORTHO05D006160 1.1e-60 237.3 199 63.8
Ciclev10029272m.g Citrus clementina HOM05D005311 ORTHO05D006160 1.5e-60 236.9 214 60.7
Potri.001G289400 Populus trichocarpa HOM05D005311 ORTHO05D006160 1.5e-60 236.9 223 60.5
QL11p029204 Quercus lobata HOM05D005311 ORTHO05D006160 2.5e-60 236.1 239 55.6
TAR625G0307 Trochodendron aralioides HOM05D005311 ORTHO05D006160 2.5e-60 236.1 188 66.0
TAR628G1269 Trochodendron aralioides HOM05D005311 ORTHO05D006160 2.5e-60 236.1 188 66.0
Gorai.005G229500 Gossypium raimondii HOM05D005311 ORTHO05D006160 5.6e-60 235.0 218 57.3
TWI59G0049 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 1.6e-59 233.4 215 61.4
TWI14G0308 Tripterygium wilfordii HOM05D005311 ORTHO05D006160 2.1e-59 233.0 224 60.7
Nn6g32054 Nelumbo nucifera HOM05D005311 ORTHO05D006160 1.8e-58 229.9 154 75.3
FvH4_2g03130 Fragaria vesca HOM05D005311 ORTHO05D006160 3.1e-58 229.2 222 56.3
Sopen01g049100 Solanum pennellii HOM05D005311 ORTHO05D006160 4.5e-57 225.3 220 59.1
Nitab4.5_0000772g0050 Nicotiana tabacum HOM05D005311 ORTHO05D006160 5.8e-57 224.9 221 60.6
Lsat_1_v5_gn_9_113920 Lactuca sativa HOM05D005311 ORTHO05D006160 9.9e-57 224.2 217 61.3
Solyc01g106790.3 Solanum lycopersicum HOM05D005311 ORTHO05D006160 1.7e-56 223.4 209 60.3
Sed0009957 Sechium edule HOM05D005311 ORTHO05D006160 2.2e-56 223.0 224 58.0
CANSAT25G3378 Cannabis sativa HOM05D005311 ORTHO05D006160 2.9e-56 222.6 228 57.0
PGSC0003DMG400025735 Solanum tuberosum HOM05D005311 ORTHO05D006160 2.9e-56 222.6 220 58.6
FAN24G0492 Fragaria x ananassa HOM05D005311 ORTHO05D006160 4.9e-56 221.9 226 54.9
Actinidia00352 Actinidia chinensis HOM05D005311 ORTHO05D006160 1.4e-55 220.3 224 54.9
Cc02_g20120 Coffea canephora HOM05D005311 ORTHO05D006160 1.9e-55 219.9 167 68.3
FAN20G1889 Fragaria x ananassa HOM05D005311 ORTHO05D006160 1.9e-55 219.9 226 54.4
Nitab4.5_0009103g0020 Nicotiana tabacum HOM05D005311 ORTHO05D006160 1.9e-55 219.9 221 59.7
FAN27G0024 Fragaria x ananassa HOM05D005311 ORTHO05D006160 3.2e-55 219.2 226 54.0
Cpa.g.sc106.28 Carica papaya HOM05D005311 ORTHO05D006160 5.5e-55 218.4 269 49.8
MELO3C018026.2 Cucumis melo HOM05D005311 ORTHO05D006160 5.5e-55 218.4 220 57.7
ECA240G0703 Erigeron canadensis HOM05D005311 ORTHO05D006160 7.1e-55 218.0 192 63.5
RcHm_v2.0_Chr6g0248001 Rosa chinensis HOM05D005311 ORTHO05D006160 2.1e-54 216.5 247 51.0
Eucgr.I02500 Eucalyptus grandis HOM05D005311 ORTHO05D006160 4.6e-54 215.3 170 70.6
TPR.G21150 Trifolium pratense HOM05D005311 ORTHO05D006160 6.0e-54 214.9 147 76.9
Psat6g210680 Pisum sativum HOM05D005311 ORTHO05D006160 1.0e-53 214.2 140 79.3
CAN.G606.76 Capsicum annuum HOM05D005311 ORTHO05D006160 1.8e-53 213.4 225 55.6
Peaxi162Scf00016g03127 Petunia axillaris HOM05D005311 ORTHO05D006160 1.1e-52 210.7 180 63.9
Actinidia02445 Actinidia chinensis HOM05D005311 ORTHO05D006160 2.5e-52 209.5 226 53.5
FAN15G1540 Fragaria x ananassa HOM05D005311 ORTHO05D006160 2.5e-52 209.5 218 53.7
vmacro01940 Vaccinium macrocarpon HOM05D000211 ORTHO05D002517 2.5e-52 209.5 181 64.1
Lsat_1_v5_gn_7_84560 Lactuca sativa HOM05D005311 ORTHO05D006160 3.3e-52 209.1 171 63.7
THA.LOC104815219 Tarenaya hassleriana HOM05D005311 ORTHO05D006160 4.3e-52 208.8 169 67.5
ClCG10G010010 Citrullus lanatus HOM05D005311 ORTHO05D006160 5.6e-52 208.4 156 72.4
HanXRQChr15g0495651 Helianthus annuus HOM05D005311 ORTHO05D006160 2.8e-51 206.1 200 57.5
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 2.8e-51 206.1 195 58.5
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 3.7e-51 205.7 224 54.5
Lj9A337G44 Lonicera japonica HOM05D005311 ORTHO05D006160 8.1e-51 204.5 155 69.0
Thhalv10011774m.g Eutrema salsugineum HOM05D005311 ORTHO05D006160 1.1e-50 204.1 169 65.1
ECA236G2995 Erigeron canadensis HOM05D000211 ORTHO05D002517 1.5e-49 200.3 178 61.8
MSTRG.16668 Avicennia marina HOM05D005311 ORTHO05D006160 2.0e-49 199.9 172 65.1
CsaV3_4G000050 Cucumis sativus L. HOM05D005311 ORTHO05D006160 2.6e-49 199.5 154 70.1
SalBow6G1857 Salvia bowleyana HOM05D005311 ORTHO05D006160 3.4e-49 199.1 171 62.6
Migut.B00474 Erythranthe guttata HOM05D005311 ORTHO05D006160 4.5e-49 198.7 176 60.8
SGA_v2.0_scaffold32G12981 Striga asiatica HOM05D005311 ORTHO05D006160 4.5e-49 198.7 188 58.5
AL1G57590 Arabidopsis lyrata HOM05D005311 ORTHO05D006160 7.6e-49 198.0 168 62.5
Hund00418 Selenicereus undatus HOM05D005311 ORTHO05D006160 7.6e-49 198.0 168 63.1
CARHR040130 Cardamine hirsuta HOM05D005311 ORTHO05D006160 1.7e-48 196.8 168 63.1
Sp1g36880 Schrenkiella parvula HOM05D005311 ORTHO05D006160 1.7e-48 196.8 169 63.3
Carub.0001s3920 Capsella rubella HOM05D005311 ORTHO05D006160 2.2e-48 196.4 213 54.5
Sc18g0007330 Simmondsia chinensis HOM05D005311 ORTHO05D006160 3.8e-48 195.7 168 60.7
AT1G50020 Arabidopsis thaliana HOM05D005311 ORTHO05D006160 3.2e-47 192.6 206 55.3
Lj5A221T62 Lonicera japonica HOM05D005311 ORTHO05D006160 4.2e-47 192.2 145 69.7
Ah.01g024570 Amaranthus hybridus HOM05D005311 ORTHO05D006160 7.1e-47 191.4 163 63.2
ATR0767G087 Amborella trichopoda HOM05D005311 ORTHO05D006160 7.1e-47 191.4 160 63.1
DCAR_021939 Daucus carota HOM05D005311 ORTHO05D006160 7.1e-47 191.4 154 66.2
arahy.Tifrunner.gnm1.ann1.YXS8EF Arachis hypogaea HOM05D005311 ORTHO05D006160 1.2e-46 190.7 145 71.0
A08p03390 Brassica napus HOM05D005311 ORTHO05D006160 1.2e-46 190.7 163 62.6
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 2.1e-46 189.9 158 63.9
BolC3t21257H Brassica oleracea HOM05D005311 ORTHO05D006160 2.7e-46 189.5 224 51.3
BraA08t32371Z Brassica rapa HOM05D005311 ORTHO05D006160 6.0e-46 188.3 163 61.3
PSO210G6612 Papaver somniferum HOM05D005311 ORTHO05D006160 6.0e-46 188.3 172 61.6
C03p89430 Brassica napus HOM05D005311 ORTHO05D006160 1.3e-45 187.2 162 62.3
BcaB07g33454 Brassica carinata HOM05D005311 ORTHO05D006160 3.9e-45 185.7 163 64.4
BcaC08g43180 Brassica carinata HOM05D005311 ORTHO05D006160 3.9e-45 185.7 163 64.4
BolC6t35609H Brassica oleracea HOM05D005311 ORTHO05D006160 3.9e-45 185.7 163 64.4
Duzib132G0391 Durio zibethinus HOM05D005311 ORTHO05D006160 5.1e-45 185.3 221 48.9
PSO447G0012 Papaver somniferum HOM05D005311 ORTHO05D006160 5.1e-45 185.3 194 56.7
A06p03410 Brassica napus HOM05D005311 ORTHO05D006160 6.7e-45 184.9 200 57.0
BraA06t23549Z Brassica rapa HOM05D005311 ORTHO05D006160 6.7e-45 184.9 163 64.4
C06p04800 Brassica napus HOM05D005311 ORTHO05D006160 2.5e-44 183.0 163 63.8
AUR62027028 Chenopodium quinoa HOM05D005311 ORTHO05D006160 5.7e-44 181.8 176 55.1
AUR62030871 Chenopodium quinoa HOM05D005311 ORTHO05D006160 7.4e-44 181.4 154 60.4
Oeu037294.1 Olea europaea HOM05D005311 ORTHO05D006160 4.8e-43 178.7 145 64.8
Prupe.8G151000 Prunus persica HOM05D005311 ORTHO05D006160 9.0e-42 174.5 179 56.4
Dinv09534 Davidia involucrata HOM05D000211 ORTHO05D002517 1.0e-40 171.0 189 54.5
GSVIVG01009264001 Vitis vinifera HOM05D005311 ORTHO05D006160 1.0e-40 171.0 161 55.9
HanXRQChr03g0073011 Helianthus annuus HOM05D005311 ORTHO05D006160 1.3e-40 170.6 172 58.1
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 9.3e-39 164.5 154 58.4
BcaB04g17278 Brassica carinata HOM05D005311 ORTHO05D006160 3.0e-37 159.5 146 62.3
Sabra09G0065400 Salix brachista HOM05D000308 ORTHO05D002517 1.1e-36 157.5 160 55.6
arahy.Tifrunner.gnm1.ann1.YSC4AN Arachis hypogaea HOM05D005311 ORTHO05D006160 1.9e-36 156.8 145 59.3
unitig_61.g26039 Utricularia gibba HOM05D005311 ORTHO05D006160 1.9e-36 156.8 161 54.7
Zm00001eb201730 Zea mays HOM05D005311 ORTHO05D006160 1.3e-35 154.1 173 52.6
Os11g0549900 Oryza sativa ssp. japonica HOM05D005311 ORTHO05D006160 4.5e-33 145.6 151 53.6
arahy.Tifrunner.gnm1.ann1.6ZTX4G Arachis hypogaea HOM05D005311 ORTHO05D006160 5.5e-31 138.7 143 54.5
EL10Ac9g22172 Beta vulgaris HOM05D005311 ORTHO05D006160 5.5e-31 138.7 181 48.6
PGR142G3492 Punica granatum HOM05D005311 ORTHO05D006160 1.6e-30 137.1 171 46.8
unitig_60.g25463 Utricularia gibba HOM05D005311 ORTHO05D006160 1.0e-29 134.4 162 50.6
CDE04G0288 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 2.6e-25 119.8 85 69.4
SMO118G0105 Selaginella moellendorffii HOM05D005311 ORTHO05D006160 2.6e-25 119.8 182 41.2
Oeu025305.1 Olea europaea HOM05D005311 ORTHO05D006160 4.5e-25 119.0 113 61.1
Haze_10287 Corylus avellana HOM05D005311 ORTHO05D006160 2.2e-24 116.7 86 67.4
TAR365G0893 Trochodendron aralioides HOM05D005311 ORTHO05D006160 5.0e-24 115.5 133 52.6
Cfa004693 Carpinus fangiana HOM05D005311 ORTHO05D006160 3.2e-23 112.8 78 73.1
arahy.Tifrunner.gnm1.ann1.TC5M0Q Arachis hypogaea HOM05D005311 ORTHO05D006160 7.2e-23 111.7 130 50.0
arahy.Tifrunner.gnm1.ann1.HG6PX3 Arachis hypogaea HOM05D005311 ORTHO05D006160 2.7e-22 109.8 132 47.7
CSS0025480 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 1.4e-21 107.5 136 50.7
Pp3c9_20640 Physcomitrium patens HOM05D005311 ORTHO05D006160 3.9e-21 105.9 152 44.1
Oeu037691.1 Olea europaea HOM05D005311 ORTHO05D006160 5.2e-21 105.5 95 63.2
Mapoly0159s0003 Marchantia polymorpha HOM05D005311 ORTHO05D006160 8.8e-21 104.8 185 40.0
SGA_v2.0_scaffold225G43064 Striga asiatica HOM05D005311 ORTHO05D006160 3.3e-20 102.8 125 49.6
Rhsim05G0093200 Rhododendron simsii HOM05D005311 ORTHO05D006160 4.8e-19 99.0 200 40.5
Dinv44912 Davidia involucrata HOM05D005311 ORTHO05D006160 2.4e-18 96.7 130 43.8
AagrBONN_evm.TU.Sc2ySwM_340.346 Anthoceros agrestis HOM05D005311 ORTHO05D006160 2.6e-17 93.2 169 39.1
vmacro22259 Vaccinium macrocarpon HOM05D005311 ORTHO05D006160 7.7e-17 91.7 91 54.9
CDE02G0336 Ceratophyllum demersum HOM05D005311 ORTHO05D006160 3.8e-16 89.4 95 54.7
Dinv16067 Davidia involucrata HOM05D005311 ORTHO05D006160 6.1e-14 82.0 128 42.2
HPP92_006035 Vanilla planifolia HOM05D005311 ORTHO05D006160 8.0e-14 81.6 127 46.5
Cre14.g614000 Chlamydomonas reinhardtii HOM05D005311 ORTHO05D006160 1.0e-13 81.3 88 47.7
CARHR113150 Cardamine hirsuta HOM05D005311 ORTHO05D006160 3.1e-10 69.7 50 72.0
SEGI_31449 Sequoiadendron giganteum HOM05D005311 ORTHO05D006160 3.1e-10 69.7 89 51.7
CBR_g12748 Chara braunii HOM05D000019 ORTHO05D000048 9.1e-10 68.2 71 49.3
CSS0010436 Camellia sinensis var. sinensis HOM05D005311 ORTHO05D006160 5.9e-09 65.5 42 73.8


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