Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.0e-131 473.4 239 100.0
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 6.1e-124 447.6 237 96.2
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 1.4e-117 426.4 238 91.2
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 2.2e-105 386.0 237 81.9
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 1.3e-102 376.7 240 80.8
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.7e-102 376.3 241 81.3
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 3.3e-98 362.1 263 74.5
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 4.4e-98 361.7 240 78.8
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 3.6e-92 342.0 241 72.2
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 6.8e-91 337.8 246 69.5
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 1.5e-90 336.7 239 71.1
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 2.6e-90 335.9 233 72.5
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 6.3e-89 331.3 238 70.6
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 8.3e-89 330.9 226 73.5
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.1e-88 330.5 239 69.9
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.4e-88 330.1 238 70.6
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.4e-88 330.1 238 69.7
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 3.1e-88 328.9 216 72.2
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 4.1e-88 328.6 231 71.0
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 1.6e-87 326.6 241 67.2
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.5e-87 325.5 209 76.6
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 4.5e-87 325.1 245 66.1
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 7.7e-87 324.3 229 70.7
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.3e-86 323.6 231 70.6
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.5e-85 320.1 240 67.1
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 2.5e-85 319.3 239 68.2
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 7.2e-85 317.8 204 79.4
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 7.2e-85 317.8 239 68.6
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 2.8e-84 315.8 230 68.7
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 6.1e-84 314.7 255 65.1
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.4e-83 313.5 240 65.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 8.9e-83 310.8 243 66.7
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 8.9e-83 310.8 230 67.0
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 8.9e-83 310.8 240 65.8
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 1.5e-82 310.1 184 83.2
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 1.5e-82 310.1 184 83.2
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 2.0e-82 309.7 214 71.5
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 2.6e-82 309.3 247 64.8
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 2.6e-82 309.3 205 73.2
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 2.6e-82 309.3 229 67.2
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 7.5e-82 307.8 236 65.7
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.3e-81 307.0 239 66.5
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 8.3e-81 304.3 238 64.3
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 2.4e-80 302.8 236 64.8
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.4e-80 302.8 208 71.2
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 9.2e-80 300.8 249 63.9
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 4.5e-79 298.5 228 66.2
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 5.9e-79 298.1 225 64.9
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.3e-78 297.0 228 64.5
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.3e-78 297.0 228 64.5
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 5.0e-78 295.0 228 65.4
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 8.6e-78 294.3 246 61.0
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 1.9e-77 293.1 255 59.6
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.9e-77 293.1 258 59.7
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 5.6e-77 291.6 211 67.8
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 9.5e-77 290.8 225 64.9
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 2.1e-76 289.7 218 65.1
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.8e-76 289.3 225 64.9
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 4.7e-76 288.5 230 63.9
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 4.7e-76 288.5 239 61.5
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 3.0e-75 285.8 210 66.7
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 4.0e-75 285.4 239 60.7
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 5.2e-75 285.0 238 62.2
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 6.8e-75 284.6 238 62.2
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 6.8e-75 284.6 238 62.2
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 8.9e-75 284.3 217 64.1
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 1.5e-74 283.5 204 66.7
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 2.0e-74 283.1 227 62.6
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 2.0e-74 283.1 236 62.7
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 2.6e-74 282.7 209 67.9
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 3.4e-74 282.3 261 56.7
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 4.4e-74 282.0 239 61.9
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 7.5e-74 281.2 208 64.9
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 1.3e-73 280.4 184 73.4
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.7e-73 280.0 215 65.6
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.4e-72 275.0 183 73.2
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 3.5e-71 272.3 239 59.4
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 4.6e-71 271.9 184 70.7
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 7.8e-71 271.2 232 61.6
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 3.0e-70 269.2 183 72.1
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 5.6e-69 265.0 219 60.3
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 3.6e-68 262.3 185 68.1
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.4e-67 260.4 184 68.5
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 1.2e-66 257.3 208 58.7
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 6.4e-65 251.5 209 62.2
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 4.3e-61 238.8 170 70.0
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.6e-61 238.4 209 59.8
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 8.1e-60 234.6 158 74.7
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.2e-58 230.7 186 66.1
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 3.4e-58 229.2 159 72.3
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.4e-58 229.2 172 67.4
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 2.2e-57 226.5 225 52.0
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.6e-55 220.3 180 60.0
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 1.3e-54 217.2 157 69.4
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.1e-53 214.2 203 52.2
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 1.2e-52 210.7 160 66.2
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 3.1e-51 206.1 238 46.2
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 2.0e-50 203.4 200 50.0
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 1.5e-45 187.2 178 61.2
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 7.3e-45 184.9 134 67.9
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 2.6e-42 176.4 202 45.0
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.4e-40 169.9 119 70.6
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 2.3e-30 136.7 155 48.4
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 2.3e-30 136.7 231 41.6
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 3.4e-18 96.3 143 38.5
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 1.9e-16 90.5 244 29.1
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 2.3e-14 83.6 175 32.6
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 7.4e-13 78.6 65 61.5
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 2.8e-12 76.6 102 45.1
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 5.5e-08 62.4 56 58.9
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 9.4e-08 61.6 53 54.7
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 2.1e-07 60.5 202 23.8
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 2.3e-06 57.0 53 56.6
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 3.9e-06 56.2 30 83.3


User provided reference genes

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