Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 1.4e-60 236.1 124 100.0
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 6.1e-51 204.1 118 89.0
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.2e-46 189.9 124 79.0
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.5e-46 188.0 127 79.5
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 4.3e-41 171.4 125 68.8
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 7.4e-41 170.6 125 68.8
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 2.6e-38 162.2 124 71.8
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 1.1e-36 156.8 124 66.9
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 4.7e-35 151.4 124 63.7
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 4.7e-35 151.4 125 65.6
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 1.0e-34 150.2 124 62.9
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 1.0e-34 150.2 124 62.9
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 3.3e-33 145.2 128 65.6
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 8.2e-32 140.6 127 65.4
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 8.2e-32 140.6 130 60.0
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 1.1e-31 140.2 125 61.6
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 5.3e-31 137.9 139 56.8
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.2e-30 136.7 124 58.1
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.6e-30 136.3 128 62.5
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 2.6e-30 135.6 137 54.0
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.5e-30 135.2 127 56.7
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 1.0e-29 133.7 124 56.5
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 1.0e-29 133.7 125 56.8
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 2.2e-29 132.5 124 55.6
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.9e-29 132.1 124 56.5
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 3.2e-28 128.6 138 52.9
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 5.5e-28 127.9 138 51.4
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 9.4e-28 127.1 133 56.4
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 1.2e-27 126.7 128 58.6
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 2.7e-27 125.6 140 50.0
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 3.6e-27 125.2 128 55.5
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 3.6e-27 125.2 129 56.6
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 3.6e-27 125.2 120 57.5
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.8e-26 122.9 124 58.1
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.3e-26 122.5 124 58.1
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 2.3e-26 122.5 125 56.8
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.3e-26 122.5 125 56.8
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 2.3e-26 122.5 125 55.2
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 3.0e-26 122.1 125 56.0
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 4.0e-26 121.7 88 67.0
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 2.6e-25 119.0 125 54.4
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 2.6e-25 119.0 125 56.8
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 2.6e-25 119.0 129 50.4
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 5.7e-25 117.9 125 54.4
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 7.5e-25 117.5 124 54.0
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 2.2e-24 115.9 127 51.2
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 2.4e-23 112.5 136 51.5
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 3.1e-23 112.1 129 51.9
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 3.1e-23 112.1 86 66.3
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 4.1e-23 111.7 126 53.2
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 7.0e-23 110.9 85 69.4
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.6e-22 109.8 129 51.2
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 2.0e-22 109.4 103 58.3
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 2.7e-22 109.0 125 54.4
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 2.7e-22 109.0 127 48.8
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 2.7e-22 109.0 168 39.9
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 3.5e-22 108.6 135 48.9
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 4.5e-22 108.2 103 57.3
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 5.9e-22 107.8 125 55.2
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 5.9e-22 107.8 125 55.2
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 5.9e-22 107.8 129 48.1
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 5.9e-22 107.8 126 51.6
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 7.7e-22 107.5 129 50.4
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 7.7e-22 107.5 125 52.0
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 7.7e-22 107.5 85 64.7
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 1.0e-21 107.1 125 54.4
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 5.0e-21 104.8 97 60.8
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 6.5e-21 104.4 114 57.0
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 1.5e-20 103.2 91 59.3
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.9e-20 102.8 85 67.1
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.9e-20 102.8 94 61.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 2.5e-20 102.4 129 52.7
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 2.5e-20 102.4 89 62.9
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 1.2e-19 100.1 125 52.0
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.1e-19 99.4 130 47.7
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 3.6e-19 98.6 124 51.6
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 6.1e-19 97.8 119 51.3
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 2.3e-18 95.9 73 69.9
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.3e-18 95.9 131 48.1
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 4.0e-18 95.1 68 72.1
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 8.8e-18 94.0 154 44.2
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 1.2e-17 93.6 96 57.3
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.0e-17 92.8 90 58.9
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 2.0e-17 92.8 90 58.9
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.8e-16 89.0 60 75.0
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 2.8e-16 89.0 88 54.5
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 1.8e-15 86.3 102 51.0
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 4.1e-15 85.1 65 64.6
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 5.4e-15 84.7 58 74.1
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 2.0e-14 82.8 63 68.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 2.7e-14 82.4 64 65.6
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 1.0e-13 80.5 76 57.9
Manes.07G054000 Manihot esculenta HOM05D007571 ORTHO05D009439 5.2e-10 68.2 81 53.1
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 2.0e-09 66.2 66 48.5
Potri.009G086400 Populus trichocarpa HOM05D007571 ORTHO05D009439 3.4e-09 65.5 78 50.0
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 3.4e-09 65.5 46 73.9
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 2.2e-08 62.8 65 49.2
Aa31LG10G4150 Aethionema arabicum HOM05D007571 ORTHO05D009439 4.1e-07 58.5 85 47.1
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 1.2e-06 57.0 108 36.1


User provided reference genes

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