Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 0.0e+00 1340.5 794 100.0
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 5.4e-294 1014.2 768 82.9
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 4.0e-273 944.9 803 78.1
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 2.7e-229 799.3 789 66.0
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 3.9e-220 768.8 797 64.2
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 1.8e-204 716.8 804 63.4
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 1.8e-201 706.8 803 58.9
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 1.0e-196 691.0 806 60.8
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 5.0e-175 619.0 918 46.9
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 1.5e-174 617.5 917 49.5
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 4.3e-174 615.9 803 60.5
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.8e-164 583.9 793 53.3
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.4e-163 579.7 784 54.3
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.9e-161 573.9 816 49.4
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.9e-150 537.3 825 49.6
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 1.1e-145 521.5 832 43.8
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 9.3e-145 518.5 833 46.6
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 8.7e-143 511.9 874 45.5
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 3.7e-141 506.5 805 48.0
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 4.8e-141 506.1 812 44.5
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 3.8e-138 496.5 882 44.9
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 8.7e-135 485.3 821 44.6
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.2e-131 474.9 892 46.0
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 4.5e-131 473.0 844 45.7
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 1.1e-129 468.4 934 44.9
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.4e-129 468.0 906 45.0
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 7.9e-128 462.2 883 40.7
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 7.4e-126 455.7 851 45.6
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 4.8e-125 453.0 846 46.6
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.4e-124 450.7 875 43.5
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.2e-123 448.4 882 44.1
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.2e-123 448.4 882 43.3
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.0e-123 447.6 846 46.2
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.7e-122 444.5 884 45.1
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 3.8e-122 443.4 849 41.5
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 8.5e-122 442.2 889 47.1
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 8.5e-122 442.2 837 44.7
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 9.3e-121 438.7 781 43.9
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 1.6e-120 438.0 804 42.8
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 9.7e-118 428.7 783 43.3
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 5.3e-116 422.9 814 40.0
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 2.1e-112 411.0 782 41.4
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 2.7e-112 410.6 965 40.5
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 3.6e-112 410.2 785 41.4
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 8.8e-111 405.6 1012 36.6
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.4e-108 398.3 730 47.8
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 2.9e-106 390.6 817 38.3
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 2.9e-106 390.6 835 39.3
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 2.1e-104 384.4 771 38.0
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 4.7e-104 383.3 925 36.4
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 8.0e-104 382.5 835 38.7
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 4.8e-101 373.2 903 40.8
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.2e-99 368.6 841 39.4
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.2e-99 368.6 710 45.6
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.6e-99 368.2 822 38.6
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 5.9e-99 366.3 405 57.3
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 7.7e-99 365.9 684 42.0
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.7e-98 364.8 417 51.3
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.5e-97 361.7 851 35.3
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.6e-96 358.2 866 33.5
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 3.6e-96 357.1 606 41.6
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.8e-95 354.8 719 40.2
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 1.8e-95 354.8 830 38.8
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 4.0e-95 353.6 800 42.2
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 4.0e-95 353.6 877 33.0
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 5.2e-95 353.2 882 41.7
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 8.8e-95 352.4 854 41.0
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 1.2e-94 352.1 836 38.5
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.3e-94 350.5 801 36.0
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 6.3e-93 346.3 846 41.4
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 2.4e-92 344.4 773 36.1
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 7.0e-92 342.8 719 43.1
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 3.5e-91 340.5 718 39.3
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 7.7e-91 339.3 872 38.2
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 5.0e-90 336.7 722 39.3
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 8.5e-90 335.9 792 38.6
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 4.2e-89 333.6 863 40.9
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 4.7e-88 330.1 874 39.9
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 6.1e-88 329.7 819 41.0
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 1.8e-87 328.2 721 41.7
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 1.8e-87 328.2 774 38.6
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 3.0e-87 327.4 867 39.8
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 6.8e-87 326.2 862 37.1
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 6.3e-85 319.7 802 40.1
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 2.4e-84 317.8 849 39.0
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 4.1e-84 317.0 792 40.9
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.9e-81 308.1 752 39.6
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 9.5e-81 305.8 350 55.4
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.2e-80 305.4 756 37.7
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 3.7e-77 293.9 739 39.1
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 9.2e-76 289.3 849 38.3
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 1.7e-74 285.0 439 43.5
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 2.3e-74 284.6 438 43.8
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 2.9e-74 284.3 806 38.7
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 8.6e-74 282.7 412 47.6
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 8.9e-47 193.0 650 39.8
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.3e-45 189.1 295 41.0
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.3e-45 189.1 295 41.0
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 5.6e-41 173.7 898 29.2
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 2.1e-40 171.8 348 38.5
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 9.3e-36 156.4 146 58.9
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.7e-34 152.1 313 39.3
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 9.6e-33 146.4 287 38.7
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 1.8e-26 125.6 134 53.0
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 6.7e-26 123.6 579 33.0
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.5e-25 121.7 235 37.0
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 2.8e-24 118.2 93 69.9
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 4.5e-22 110.9 82 67.1
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 1.1e-20 106.3 216 40.3
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 4.6e-19 100.9 139 49.6
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 5.6e-17 94.0 237 40.1
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 2.1e-16 92.0 95 56.8
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 1.1e-15 89.7 138 44.2
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 5.8e-14 84.0 354 39.0
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.1e-11 75.5 144 40.3
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 5.1e-10 70.9 72 50.0
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 7.4e-09 67.0 128 39.8
Glyma.10G258901 Glycine max HOM05D006481 ORTHO05D008160 4.8e-08 64.3 71 54.9
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 2.0e-06 58.9 47 61.7
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 7.7e-06 57.0 69 52.2


User provided reference genes

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