Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G043000 Phaseolus vulgaris HOM05D006153 ORTHO05D007701 8.3e-54 213.4 103 100.0
VMungo0720G0345 Vigna mungo HOM05D006153 ORTHO05D007701 1.2e-47 193.0 101 90.1
Glyma.20G131700 Glycine max HOM05D006153 ORTHO05D007701 1.0e-43 179.9 100 86.0
Glyma.10G259200 Glycine max HOM05D006153 ORTHO05D007701 9.8e-39 163.3 103 79.6
arahy.Tifrunner.gnm1.ann1.EHR7LK Arachis hypogaea HOM05D006153 ORTHO05D007701 2.3e-27 125.6 97 66.0
Lalb_Chr06g0165291 Lupinus albus HOM05D006153 ORTHO05D007701 2.3e-27 125.6 100 66.0
Lj5g0024415 Lotus japonicus HOM05D006153 ORTHO05D007701 6.6e-27 124.0 96 70.8
Lj5g0020623 Lotus japonicus HOM05D006153 ORTHO05D007701 3.3e-26 121.7 99 69.7
Lalb_Chr02g0145121 Lupinus albus HOM05D006153 ORTHO05D007701 2.4e-24 115.5 99 60.6
Duzib132G0541 Durio zibethinus HOM05D006153 ORTHO05D007701 6.4e-22 107.5 98 54.1
Cfa004694 Carpinus fangiana HOM05D006153 ORTHO05D007701 2.1e-20 102.4 94 54.3
Dinv42217 Davidia involucrata HOM05D006153 ORTHO05D007701 2.7e-20 102.1 102 52.0
QL11p031990 Quercus lobata HOM05D006153 ORTHO05D007701 1.0e-19 100.1 82 56.1
Dinv15786 Davidia involucrata HOM05D006153 ORTHO05D007701 2.3e-19 99.0 102 54.9
Gohir.A01G008400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.3e-19 99.0 101 50.5
Gohir.D13G044400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 2.3e-19 99.0 98 50.0
Gorai.002G009800 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.3e-19 99.0 99 50.5
Gorai.013G049200 Gossypium raimondii HOM05D006153 ORTHO05D007701 2.3e-19 99.0 98 50.0
Thecc.02G113400 Theobroma cacao HOM05D006153 ORTHO05D007701 3.0e-19 98.6 98 51.0
Cpa.g.sc200.7 Carica papaya HOM05D006153 ORTHO05D007701 3.9e-19 98.2 102 49.0
Manes.07G064400 Manihot esculenta HOM05D006153 ORTHO05D007701 3.9e-19 98.2 105 49.5
Haze_10289 Corylus avellana HOM05D006153 ORTHO05D007701 8.7e-19 97.1 93 46.2
Sabra16G0186000 Salix brachista HOM05D006153 ORTHO05D007701 1.1e-18 96.7 101 49.5
Duzib052G0610 Durio zibethinus HOM05D006153 ORTHO05D007701 1.5e-18 96.3 102 48.0
CiPaw.05G015200 Carya illinoinensis HOM05D006153 ORTHO05D007701 1.9e-18 95.9 99 48.5
COL.COLO4_32545 Corchorus olitorius HOM05D006153 ORTHO05D007701 2.5e-18 95.5 102 47.1
CSS0010428 Camellia sinensis var. sinensis HOM05D006153 ORTHO05D007701 3.3e-18 95.1 100 50.0
Hma1.2p1_1174F.1_g263880 Hydrangea macrophylla HOM05D006153 ORTHO05D007701 4.3e-18 94.7 101 47.5
Lj1g0020403 Lotus japonicus HOM05D006153 ORTHO05D007701 4.3e-18 94.7 101 50.5
QL11p029270 Quercus lobata HOM05D006153 ORTHO05D007701 4.3e-18 94.7 103 49.5
GSVIVG01037871001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.6e-18 94.4 101 50.5
GSVIVG01037872001 Vitis vinifera HOM05D006153 ORTHO05D007701 5.6e-18 94.4 99 49.5
Prupe.8G140400 Prunus persica HOM05D006153 ORTHO05D007701 7.3e-18 94.0 101 51.5
GSVIVG01037873001 Vitis vinifera HOM05D006153 ORTHO05D007701 2.1e-17 92.4 99 48.5
FAN24G1230 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.8e-17 92.0 103 52.4
FAN20G1027 Fragaria x ananassa HOM05D006153 ORTHO05D007701 3.6e-17 91.7 103 52.4
TAR381G0917 Trochodendron aralioides HOM05D006153 ORTHO05D007701 3.6e-17 91.7 98 46.9
FvH4_2g04480 Fragaria vesca HOM05D006153 ORTHO05D007701 4.8e-17 91.3 103 52.4
Potri.001G296900 Populus trichocarpa HOM05D006153 ORTHO05D007701 4.8e-17 91.3 102 48.0
Haze_10299 Corylus avellana HOM05D006153 ORTHO05D007701 8.1e-17 90.5 91 47.3
FAN27G0726 Fragaria x ananassa HOM05D006153 ORTHO05D007701 2.4e-16 89.0 103 50.5
MD05G1096000 Malus domestica HOM05D006153 ORTHO05D007701 3.1e-16 88.6 114 47.4
Actinidia34374 Actinidia chinensis HOM05D006153 ORTHO05D007701 4.0e-16 88.2 103 47.6
Haze_10254 Corylus avellana HOM05D006153 ORTHO05D007701 4.0e-16 88.2 92 51.1
FAN15G1936 Fragaria x ananassa HOM05D006153 ORTHO05D007701 4.0e-16 88.2 104 51.9
MD10G1102200 Malus domestica HOM05D006153 ORTHO05D007701 5.3e-16 87.8 113 45.1
Sabra09G0070400 Salix brachista HOM05D006153 ORTHO05D007701 5.3e-16 87.8 93 50.5
RcHm_v2.0_Chr6g0253971 Rosa chinensis HOM05D006153 ORTHO05D007701 6.9e-16 87.4 101 50.5
Potri.009G091100 Populus trichocarpa HOM05D006153 ORTHO05D007701 9.0e-16 87.0 61 65.6
PGR042G3678 Punica granatum HOM05D006153 ORTHO05D007701 2.0e-15 85.9 103 43.7
Nn5g30510 Nelumbo nucifera HOM05D006153 ORTHO05D007701 5.8e-15 84.3 94 45.7
Manes.10G074900 Manihot esculenta HOM05D006153 ORTHO05D007701 9.9e-15 83.6 102 44.1
Sed0025917 Sechium edule HOM05D006153 ORTHO05D007701 1.7e-14 82.8 46 71.7
Eucgr.G00438 Eucalyptus grandis HOM05D006153 ORTHO05D007701 2.9e-14 82.0 94 45.7
MELO3C018509.2 Cucumis melo HOM05D006153 ORTHO05D007701 3.8e-14 81.6 51 62.7
Nitab4.5_0012681g0010 Nicotiana tabacum HOM05D006153 ORTHO05D007701 3.8e-14 81.6 67 56.7
Nitab4.5_0002017g0030 Nicotiana tabacum HOM05D006153 ORTHO05D007701 4.9e-14 81.3 49 65.3
Nitab4.5_0001105g0220 Nicotiana tabacum HOM05D006153 ORTHO05D007701 8.4e-14 80.5 47 68.1
Oeu013772.1 Olea europaea HOM05D006153 ORTHO05D007701 8.4e-14 80.5 49 61.2
Cfa004655 Carpinus fangiana HOM05D006153 ORTHO05D007701 1.1e-13 80.1 61 60.7
TWI23G0900 Tripterygium wilfordii HOM05D006153 ORTHO05D007701 1.1e-13 80.1 82 53.7
Sc14g0002580 Simmondsia chinensis HOM05D006153 ORTHO05D007701 1.4e-13 79.7 87 43.7
BcaC05g28465 Brassica carinata HOM05D006153 ORTHO05D007701 1.9e-13 79.3 106 43.4
AL3G32960 Arabidopsis lyrata HOM05D006153 ORTHO05D007701 2.4e-13 79.0 53 66.0
EL10Ac8g19360 Beta vulgaris HOM05D006153 ORTHO05D007701 2.4e-13 79.0 56 58.9
A01p35140 Brassica napus HOM05D006153 ORTHO05D007701 3.2e-13 78.6 53 64.2
CANSAT25G0942 Cannabis sativa HOM05D006153 ORTHO05D007701 3.2e-13 78.6 146 37.0
CsaV3_7G007950 Cucumis sativus L. HOM05D006153 ORTHO05D007701 4.2e-13 78.2 46 67.4
Migut.I00275 Erythranthe guttata HOM05D006153 ORTHO05D007701 4.2e-13 78.2 104 42.3
C05p45510 Brassica napus HOM05D006153 ORTHO05D007701 5.4e-13 77.8 106 42.5
BolC5t33274H Brassica oleracea HOM05D006153 ORTHO05D007701 5.4e-13 77.8 106 42.5
BraA01t03596Z Brassica rapa HOM05D006153 ORTHO05D007701 5.4e-13 77.8 102 43.1
Gohir.A13G045400 Gossypium hirsutum HOM05D006153 ORTHO05D007701 5.4e-13 77.8 81 50.6
Nitab4.5_0004685g0060 Nicotiana tabacum HOM05D006153 ORTHO05D007701 5.4e-13 77.8 74 51.4
Hund06709 Selenicereus undatus HOM05D006153 ORTHO05D007701 5.4e-13 77.8 44 70.5
AT3G19550 Arabidopsis thaliana HOM05D006153 ORTHO05D007701 7.1e-13 77.4 101 42.6
A05p30090 Brassica napus HOM05D006153 ORTHO05D007701 7.1e-13 77.4 106 42.5
BraA05t21849Z Brassica rapa HOM05D006153 ORTHO05D007701 7.1e-13 77.4 106 42.5
ClCG02G006680 Citrullus lanatus HOM05D006153 ORTHO05D007701 7.1e-13 77.4 91 45.1
DCAR_001674 Daucus carota HOM05D006153 ORTHO05D007701 7.1e-13 77.4 48 66.7
HanXRQChr16g0514921 Helianthus annuus HOM05D006153 ORTHO05D007701 7.1e-13 77.4 43 65.1
Ca_24350_v3 Cicer arietinum L. HOM05D006153 ORTHO05D007701 9.3e-13 77.0 96 44.8
Solyc01g107280.3 Solanum lycopersicum HOM05D006153 ORTHO05D007701 9.3e-13 77.0 102 43.1
DCAR_001679 Daucus carota HOM05D006153 ORTHO05D007701 1.2e-12 76.6 105 46.7
PSO541G5112 Papaver somniferum HOM05D006153 ORTHO05D007701 1.2e-12 76.6 44 63.6
Aa31LG8G6290 Aethionema arabicum HOM05D006153 ORTHO05D007701 1.6e-12 76.3 79 45.6
BcaB04g20697 Brassica carinata HOM05D006153 ORTHO05D007701 2.1e-12 75.9 104 42.3
HanXRQChr16g0514461 Helianthus annuus HOM05D006153 ORTHO05D007701 2.1e-12 75.9 43 67.4
Peaxi162Scf00016g00267 Petunia axillaris HOM05D006153 ORTHO05D007701 2.1e-12 75.9 80 48.8
Peaxi162Scf00152g00320 Petunia axillaris HOM05D006153 ORTHO05D007701 2.1e-12 75.9 83 41.0
Actinidia27982 Actinidia chinensis HOM05D006153 ORTHO05D007701 2.7e-12 75.5 90 46.7
HanXRQChr16g0514451 Helianthus annuus HOM05D006153 ORTHO05D007701 2.7e-12 75.5 44 63.6
Sopen01g049530 Solanum pennellii HOM05D006153 ORTHO05D007701 2.7e-12 75.5 75 46.7
MBI16_g15146_MAGBIO Magnolia biondii HOM05D006153 ORTHO05D007701 3.5e-12 75.1 98 39.8
Peaxi162Scf00003g00261 Petunia axillaris HOM05D006153 ORTHO05D007701 3.5e-12 75.1 99 44.4
DCAR_003609 Daucus carota HOM05D006153 ORTHO05D007701 4.6e-12 74.7 49 65.3
BcaB04g20696 Brassica carinata HOM05D006153 ORTHO05D007701 6.0e-12 74.3 102 40.2
BcaC09g48920 Brassica carinata HOM05D006153 ORTHO05D007701 6.0e-12 74.3 108 42.6
A01p35130 Brassica napus HOM05D006153 ORTHO05D007701 6.0e-12 74.3 106 43.4
C01p44580 Brassica napus HOM05D006153 ORTHO05D007701 6.0e-12 74.3 108 42.6
BraA01t03595Z Brassica rapa HOM05D006153 ORTHO05D007701 6.0e-12 74.3 106 43.4
Carub.0003s1938 Capsella rubella HOM05D006153 ORTHO05D007701 6.0e-12 74.3 102 44.1
Sp3g17600 Schrenkiella parvula HOM05D006153 ORTHO05D007701 6.0e-12 74.3 104 45.2
BcaB06g26014 Brassica carinata HOM05D006153 ORTHO05D007701 7.8e-12 73.9 106 41.5
HanXRQChr16g0514901 Helianthus annuus HOM05D006153 ORTHO05D007701 7.8e-12 73.9 43 62.8
CARHR094970 Cardamine hirsuta HOM05D006153 ORTHO05D007701 1.3e-11 73.2 105 41.0
Medtr5g005180 Medicago truncatula HOM05D006153 ORTHO05D007701 1.3e-11 73.2 40 72.5
Zm00001eb138020 Zea mays HOM05D006153 ORTHO05D007701 1.3e-11 73.2 43 65.1
SGA_v2.0_scaffold624G53237 Striga asiatica HOM05D006153 ORTHO05D007701 1.7e-11 72.8 42 69.0
ATR0030G019 Amborella trichopoda HOM05D006153 ORTHO05D007701 2.3e-11 72.4 46 60.9
BolC1t04422H Brassica oleracea HOM05D006153 ORTHO05D007701 2.3e-11 72.4 108 41.7
TPR.G8325 Trifolium pratense HOM05D006153 ORTHO05D007701 2.3e-11 72.4 97 45.4
Thhalv10021914m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 3.0e-11 72.0 109 42.2
ECA234G4313 Erigeron canadensis HOM05D006153 ORTHO05D007701 3.9e-11 71.6 43 60.5
Os12g0507700 Oryza sativa ssp. japonica HOM05D006153 ORTHO05D007701 3.9e-11 71.6 77 42.9
PGSC0003DMG400025850 Solanum tuberosum HOM05D006153 ORTHO05D007701 3.9e-11 71.6 51 56.9
Rhsim05G0089900 Rhododendron simsii HOM05D006153 ORTHO05D007701 5.1e-11 71.2 54 57.4
Aqoxy6G02752 Aquilegia oxysepala HOM05D006153 ORTHO05D007701 1.1e-10 70.1 49 59.2
Zm00001eb264740 Zea mays HOM05D006153 ORTHO05D007701 1.1e-10 70.1 40 65.0
Thhalv10021904m.g Eutrema salsugineum HOM05D006153 ORTHO05D007701 1.5e-10 69.7 58 55.2
Lsat_1_v5_gn_5_114460 Lactuca sativa HOM05D006153 ORTHO05D007701 2.5e-10 68.9 63 44.4
AUR62031329 Chenopodium quinoa HOM05D006153 ORTHO05D007701 3.3e-10 68.6 43 58.1
Ciclev10029838m.g Citrus clementina HOM05D006153 ORTHO05D007701 4.3e-10 68.2 109 37.6
AUR62027357 Chenopodium quinoa HOM05D006153 ORTHO05D007701 7.3e-10 67.4 84 39.3
HanXRQChr13g0425861 Helianthus annuus HOM05D006153 ORTHO05D007701 9.6e-10 67.0 43 55.8
Psat4g228040 Pisum sativum HOM05D006153 ORTHO05D007701 1.3e-09 66.6 98 43.9
Eucgr.G01281 Eucalyptus grandis HOM05D006153 ORTHO05D007701 4.0e-08 61.6 47 53.2
TAR383G0592 Trochodendron aralioides HOM05D008232 ORTHO05D010390 4.0e-08 61.6 39 59.0
Thecc.06G043900 Theobroma cacao HOM05D000051 ORTHO05D000015 1.2e-07 60.1 46 60.9
Ciclev10026814m.g Citrus clementina HOM05D008232 ORTHO05D010390 2.0e-07 59.3 70 38.6
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 3.4e-07 58.5 29 79.3
Cpa.g.sc2471.1 Carica papaya HOM05D008232 ORTHO05D010390 3.4e-07 58.5 64 46.9
COL.COLO4_26749 Corchorus olitorius HOM05D008232 ORTHO05D010390 3.4e-07 58.5 50 52.0
ECA234G3366 Erigeron canadensis HOM05D006153 ORTHO05D007701 1.7e-06 56.2 91 34.1
Peaxi162Scf00207g00211 Petunia axillaris HOM05D005461 ORTHO05D007157 2.2e-06 55.8 57 47.4
Gohir.A05G117900 Gossypium hirsutum HOM05D008232 ORTHO05D010390 2.9e-06 55.5 52 51.9
Duzib235G0354 Durio zibethinus HOM05D008232 ORTHO05D010390 3.8e-06 55.1 90 36.7
Oeu036452.1 Olea europaea HOM05D008232 ORTHO05D010390 4.9e-06 54.7 45 53.3
Aqoxy7G03060 Aquilegia oxysepala HOM05D008232 ORTHO05D010390 6.4e-06 54.3 58 48.3


User provided reference genes

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