Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 1.8e-61 239.6 128 100.0
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 2.1e-57 226.1 128 93.8
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 4.6e-57 224.9 127 94.5
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 2.5e-55 219.2 126 92.1
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 9.6e-55 217.2 127 91.3
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 2.6e-52 209.1 125 89.6
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 3.4e-52 208.8 120 90.0
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 3.8e-51 205.3 128 87.5
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.1e-50 203.8 128 86.7
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 2.3e-48 196.1 120 86.7
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-44 183.3 125 79.2
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 2.0e-44 183.0 128 77.3
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.7e-43 179.9 123 78.9
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.7e-43 179.9 123 78.9
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.7e-43 179.9 128 77.3
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 8.4e-43 177.6 132 75.8
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 2.4e-42 176.0 136 72.8
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 2.4e-42 176.0 122 80.3
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 2.4e-42 176.0 125 78.4
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.2e-42 175.6 126 76.2
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 5.5e-42 174.9 128 76.6
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 5.5e-42 174.9 123 78.0
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 9.3e-42 174.1 123 77.2
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 9.3e-42 174.1 129 76.0
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 2.7e-41 172.6 126 76.2
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 4.6e-41 171.8 138 72.5
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 7.9e-41 171.0 125 74.4
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 7.9e-41 171.0 128 73.4
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 3.9e-40 168.7 128 75.8
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 3.9e-40 168.7 133 70.7
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 5.1e-40 168.3 128 75.8
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 6.7e-40 167.9 122 75.4
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 8.7e-40 167.5 131 74.8
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 1.5e-39 166.8 133 69.9
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.5e-39 166.8 126 73.8
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.9e-39 166.4 134 69.4
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 1.9e-39 166.4 124 75.0
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.9e-39 166.4 133 68.4
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.5e-39 166.0 126 77.0
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.5e-39 166.0 131 71.0
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.6e-39 164.1 126 76.2
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.3e-38 163.7 120 72.5
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.3e-38 163.7 122 73.8
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.6e-38 163.3 124 75.0
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.1e-38 162.9 135 68.9
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.8e-38 162.5 108 79.6
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 6.2e-38 161.4 111 79.3
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 8.2e-38 161.0 127 74.0
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 3.1e-37 159.1 133 66.9
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 5.3e-37 158.3 134 71.6
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 9.0e-37 157.5 119 75.6
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 9.0e-37 157.5 186 53.8
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 1.2e-36 157.1 126 70.6
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.2e-36 157.1 126 70.6
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 1.2e-36 157.1 126 70.6
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 2.6e-36 156.0 137 67.2
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.4e-36 155.6 126 69.8
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 3.4e-36 155.6 122 71.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 4.5e-36 155.2 121 73.6
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 4.5e-36 155.2 89 91.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 5.8e-36 154.8 131 64.1
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.6e-36 154.5 113 73.5
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 7.6e-36 154.5 112 74.1
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.0e-35 154.1 130 64.6
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.3e-35 153.7 113 72.6
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 2.2e-35 152.9 125 72.8
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 4.9e-35 151.8 132 64.4
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 6.5e-35 151.4 126 69.0
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 6.5e-35 151.4 112 73.2
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 6.5e-35 151.4 112 73.2
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 8.4e-35 151.0 122 72.1
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 1.4e-34 150.2 140 63.6
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 3.2e-34 149.1 167 53.9
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 3.2e-34 149.1 134 65.7
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 4.2e-34 148.7 130 63.1
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 4.2e-34 148.7 109 78.0
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 5.5e-34 148.3 128 64.8
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 7.1e-34 147.9 127 63.8
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 7.1e-34 147.9 128 64.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 7.1e-34 147.9 128 64.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 7.1e-34 147.9 128 64.1
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 7.1e-34 147.9 125 66.4
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.2e-33 147.1 99 78.8
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.6e-33 146.7 128 64.8
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 1.6e-33 146.7 135 63.7
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 2.1e-33 146.4 157 59.9
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 4.6e-33 145.2 124 64.5
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 7.9e-33 144.4 134 61.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 7.9e-33 144.4 127 65.4
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 7.9e-33 144.4 122 64.8
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 2.3e-32 142.9 127 65.4
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 3.9e-32 142.1 123 63.4
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 5.1e-32 141.7 127 68.5
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 8.7e-32 141.0 111 72.1
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 1.5e-31 140.2 112 68.8
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 3.3e-31 139.0 104 75.0
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 3.3e-31 139.0 126 61.1
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.3e-30 137.1 82 85.4
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-30 136.7 128 60.9
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.6e-30 136.7 128 60.9
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.6e-30 136.7 124 62.1
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 4.8e-30 135.2 125 65.6
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 4.8e-30 135.2 102 75.5
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 6.3e-30 134.8 185 48.6
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.1e-29 134.0 124 66.1
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 2.4e-29 132.9 81 84.0
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 2.0e-28 129.8 80 82.5
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 3.4e-28 129.0 114 64.9
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 4.5e-28 128.6 81 81.5
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.3e-27 127.1 116 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 2.9e-27 125.9 121 61.2
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.4e-26 123.6 95 69.5
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 1.6e-25 120.2 96 68.8
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.6e-25 120.2 156 50.0
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 3.6e-25 119.0 141 54.6
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.9e-24 115.5 95 70.5
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.3e-22 110.5 123 58.5
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.4e-21 106.3 248 35.5
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 3.1e-21 105.9 106 55.7
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 3.1e-21 105.9 83 69.9
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 1.0e-19 100.9 80 68.8
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.1e-18 97.4 78 66.7
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.5e-15 87.0 89 58.4
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 3.7e-14 82.4 76 63.2
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 6.3e-14 81.6 82 56.1
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 9.1e-13 77.8 54 79.6
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 3.8e-11 72.4 78 56.4
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 3.8e-11 72.4 46 82.6
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.2e-09 67.4 37 83.8
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 5.7e-07 58.5 48 60.4
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 5.7e-07 58.5 67 47.8


User provided reference genes

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