Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 1.9e-204 715.7 374 100.0
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 4.3e-177 624.8 374 88.0
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 3.8e-165 585.1 371 82.5
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 2.4e-143 512.7 371 72.5
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.7e-141 506.5 371 73.6
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.1e-140 503.8 373 72.7
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.5e-140 503.4 373 72.9
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.5e-140 503.4 373 72.9
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 1.2e-137 493.8 372 71.2
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 3.4e-137 492.3 368 70.9
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 4.4e-137 491.9 368 70.9
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 6.3e-128 461.5 367 67.0
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 8.6e-125 451.1 363 66.1
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 6.8e-122 441.4 368 63.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 2.2e-120 436.4 373 65.7
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.1e-119 434.1 370 63.5
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.4e-119 433.7 368 64.1
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 5.4e-119 431.8 368 63.3
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 7.8e-118 427.9 348 65.2
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 7.8e-118 427.9 368 62.5
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 8.6e-117 424.5 365 61.4
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 7.3e-116 421.4 345 64.3
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 3.6e-115 419.1 410 56.3
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 4.7e-115 418.7 363 61.7
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.1e-114 417.5 363 62.0
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 3.1e-114 416.0 368 62.2
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 3.1e-114 416.0 366 60.1
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 6.8e-114 414.8 371 61.2
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 3.4e-113 412.5 366 59.6
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 3.4e-113 412.5 351 61.5
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 4.4e-113 412.1 364 61.3
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 9.8e-113 411.0 366 61.5
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.9e-112 409.5 368 61.4
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 3.7e-112 409.1 374 61.2
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 4.9e-112 408.7 368 60.9
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 4.9e-112 408.7 365 62.5
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.4e-111 407.1 368 60.6
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.4e-111 407.1 368 60.6
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.4e-111 407.1 368 60.6
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 4.6e-110 402.1 369 57.2
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.8e-110 401.4 368 60.1
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 1.3e-109 400.6 367 60.5
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.7e-109 400.2 370 61.6
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 3.9e-109 399.1 363 59.0
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 5.1e-109 398.7 363 59.8
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 6.6e-109 398.3 368 59.8
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 1.9e-108 396.7 365 59.7
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 4.3e-108 395.6 363 60.3
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 2.1e-107 393.3 365 59.7
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 2.8e-107 392.9 344 61.6
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 8.1e-107 391.3 369 57.5
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 2.3e-106 389.8 365 59.2
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 6.8e-106 388.3 391 57.3
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 6.8e-106 388.3 339 60.2
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 8.9e-106 387.9 344 59.9
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 8.9e-106 387.9 351 59.0
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 1.7e-104 383.6 366 56.8
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 6.4e-104 381.7 347 59.9
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 1.1e-103 380.9 366 58.5
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.4e-103 380.6 344 59.6
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 4.1e-103 379.0 410 52.7
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 9.2e-103 377.9 366 54.4
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 6.0e-102 375.2 346 56.6
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 6.6e-101 371.7 319 63.6
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 8.6e-101 371.3 355 57.2
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 1.5e-100 370.5 329 61.1
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 9.5e-100 367.9 250 78.0
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.2e-99 367.5 368 54.1
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 2.1e-99 366.7 356 53.1
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 2.1e-99 366.7 370 55.9
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.3e-96 357.5 354 53.4
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 1.7e-96 357.1 346 55.8
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 3.8e-96 355.9 310 62.3
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 4.9e-96 355.5 366 53.0
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 1.4e-95 354.0 369 52.0
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 5.4e-95 352.1 366 52.7
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 5.4e-95 352.1 354 52.8
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 1.2e-94 350.9 366 52.2
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.6e-94 350.5 369 52.3
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.5e-94 349.4 367 52.0
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 6.0e-94 348.6 371 52.0
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 7.8e-94 348.2 352 53.1
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 9.6e-92 341.3 345 53.9
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 2.1e-91 340.1 369 50.9
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 2.1e-91 340.1 306 61.8
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 4.7e-91 339.0 368 51.1
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 2.4e-90 336.7 345 52.8
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.0e-90 335.9 368 49.7
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 6.9e-90 335.1 312 59.9
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.2e-89 334.3 371 51.8
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 2.0e-89 333.6 388 48.7
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.6e-89 333.2 370 49.7
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 5.8e-89 332.0 311 57.9
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 2.9e-88 329.7 301 57.5
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 3.8e-88 329.3 373 48.8
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 1.9e-87 327.0 346 50.9
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 2.4e-87 326.6 356 50.3
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.0e-85 321.2 370 49.2
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 1.7e-85 320.5 370 49.2
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 3.0e-85 319.7 369 47.2
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.9e-85 319.3 370 49.7
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 6.6e-85 318.5 370 49.2
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 1.6e-83 313.9 369 46.9
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 9.0e-82 308.1 346 48.0
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.5e-81 307.4 356 49.4
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 9.9e-81 304.7 342 48.0
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 9.9e-81 304.7 284 60.2
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 8.4e-80 301.6 326 50.9
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.8e-74 283.9 346 44.8
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 4.5e-73 279.3 346 46.8
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 1.3e-72 277.7 290 52.8
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 6.4e-72 275.4 373 44.0
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 3.0e-69 266.5 368 43.2
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 9.6e-68 261.5 365 39.7
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 6.9e-66 255.4 339 43.7
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 9.0e-66 255.0 347 41.2
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 5.5e-63 245.7 345 41.7
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 3.5e-62 243.0 279 48.4
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 3.0e-61 240.0 249 56.6
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.8e-58 230.7 229 55.0
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 4.1e-58 229.6 349 40.7
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.8e-56 223.0 325 39.7
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 4.6e-54 216.1 243 51.0
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 3.3e-52 209.9 241 50.2
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 1.3e-48 198.0 272 46.3
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.4e-45 188.0 225 50.7
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 6.7e-45 185.7 299 37.8
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 6.3e-43 179.1 296 38.5
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 7.0e-42 175.6 333 35.7
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 2.6e-36 157.1 413 28.1
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 1.3e-35 154.8 125 61.6
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 2.2e-35 154.1 129 54.3
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 8.8e-29 132.1 182 43.4
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 9.1e-26 122.1 236 34.7
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 4.5e-25 119.8 157 50.3
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 2.2e-19 100.9 252 30.6
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.8e-13 81.3 153 35.3
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 1.8e-10 71.2 54 63.0
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 4.1e-10 70.1 152 36.2
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 9.2e-10 68.9 318 23.3
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 1.0e-08 65.5 53 60.4
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 1.0e-08 65.5 53 60.4


User provided reference genes

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