Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 5.1e-114 414.5 216 100.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 3.2e-84 315.5 214 81.3
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 2.3e-82 309.3 214 80.4
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 2.0e-65 253.1 211 70.1
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.6e-65 252.7 215 68.8
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 4.0e-58 228.8 217 65.9
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 7.5e-57 224.6 214 59.3
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 1.7e-56 223.4 215 60.0
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.2e-54 217.2 216 61.1
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 1.6e-54 216.9 222 59.9
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.8e-54 214.5 216 61.6
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 3.9e-53 212.2 219 55.3
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 4.3e-52 208.8 215 58.1
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 1.6e-51 206.8 219 54.3
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.8e-51 206.1 214 56.1
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 5.2e-50 201.8 218 49.5
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 2.2e-48 196.4 219 51.1
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.2e-48 196.4 215 52.6
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 2.9e-48 196.1 213 53.1
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.1e-47 194.1 216 52.8
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.1e-47 194.1 222 49.5
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.9e-47 193.4 222 50.0
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 1.9e-47 193.4 216 52.8
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 2.4e-47 193.0 216 51.9
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 2.4e-47 193.0 215 52.1
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 2.4e-47 193.0 218 52.8
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 3.2e-47 192.6 215 52.1
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 1.6e-46 190.3 214 51.9
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 2.7e-46 189.5 218 51.4
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 4.6e-46 188.7 215 54.4
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 6.0e-46 188.3 219 52.1
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.3e-45 187.2 220 51.4
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 1.7e-45 186.8 217 49.8
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 6.6e-45 184.9 213 51.2
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.5e-44 183.7 216 51.9
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.5e-44 183.7 218 51.4
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 1.9e-44 183.3 217 50.2
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 3.3e-44 182.6 215 52.1
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 9.6e-44 181.0 219 51.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 1.2e-43 180.6 217 52.5
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 1.6e-43 180.3 217 47.9
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 2.8e-43 179.5 219 51.1
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 2.8e-43 179.5 216 49.5
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 2.8e-43 179.5 216 49.5
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 3.6e-43 179.1 214 49.1
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.1e-42 177.6 218 50.9
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.1e-42 177.6 217 50.2
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.4e-42 177.2 215 54.4
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.4e-42 177.2 216 49.5
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.8e-42 176.8 214 49.5
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 1.8e-42 176.8 212 51.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 3.1e-42 176.0 215 48.8
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 5.2e-42 175.3 219 48.4
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 6.9e-42 174.9 215 48.8
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 8.9e-42 174.5 215 49.8
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 8.9e-42 174.5 236 47.0
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.2e-41 174.1 212 50.0
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 2.0e-41 173.3 214 47.7
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.0e-41 173.3 216 50.5
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 2.0e-41 173.3 216 47.7
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 5.8e-41 171.8 216 50.0
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.3e-40 170.6 219 47.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.3e-40 170.6 213 45.5
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 1.3e-40 170.6 216 49.1
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-40 170.2 218 50.5
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.2e-40 169.9 214 49.1
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 8.4e-40 167.9 167 56.3
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 2.4e-39 166.4 173 54.9
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 3.2e-39 166.0 214 46.3
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 5.4e-39 165.2 210 46.2
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 9.3e-39 164.5 215 45.6
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 9.3e-39 164.5 216 49.5
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.6e-38 163.7 220 45.9
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.6e-38 163.7 223 45.3
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.7e-38 162.9 216 46.3
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 2.7e-38 162.9 266 41.4
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 3.5e-38 162.5 219 46.6
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 1.0e-37 161.0 216 46.3
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 3.9e-37 159.1 229 45.9
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 2.5e-36 156.4 220 45.5
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 9.6e-36 154.5 196 48.5
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 2.8e-35 152.9 216 44.0
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 6.2e-35 151.8 165 53.9
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 8.1e-35 151.4 216 47.2
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 8.1e-35 151.4 216 46.3
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 2.4e-34 149.8 217 45.2
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 3.1e-34 149.4 226 43.4
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 1.2e-33 147.5 230 40.9
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 5.8e-33 145.2 213 42.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 7.1e-31 138.3 213 41.8
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 1.2e-30 137.5 212 44.8
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 2.7e-30 136.3 219 40.6
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 3.0e-29 132.9 131 55.0
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 8.7e-29 131.3 227 40.1
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 1.9e-28 130.2 126 55.6
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 3.3e-28 129.4 125 59.2
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 1.6e-27 127.1 220 39.5
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 4.8e-27 125.6 218 39.0
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 8.1e-27 124.8 221 33.9
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 1.5e-25 120.6 216 37.5
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.6e-25 118.2 230 37.8
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 7.6e-25 118.2 230 37.8
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.4e-23 114.0 166 46.4
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.8e-21 107.1 323 31.0
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.3e-21 106.7 130 48.5
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.9e-20 103.6 118 45.8
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.5e-20 103.2 118 45.8
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 8.4e-16 88.2 232 29.3
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 5.5e-15 85.5 229 34.5
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.2e-14 84.3 237 30.0
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.8e-13 80.5 109 43.1
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 1.1e-12 77.8 53 67.9
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 3.3e-12 76.3 92 54.3
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 4.8e-11 72.4 92 50.0
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 3.2e-07 59.7 105 35.2
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 9.3e-07 58.2 107 40.2


User provided reference genes

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