Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 4.7e-82 307.8 151 100.0
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 6.2e-58 227.6 158 78.5
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 7.4e-27 124.4 171 52.0
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 1.6e-21 106.7 163 45.4
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 2.1e-21 106.3 161 49.1
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 8.8e-20 100.9 155 48.4
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 2.0e-19 99.8 163 44.8
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 2.6e-19 99.4 163 44.2
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-17 94.0 159 39.0
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 2.6e-16 89.4 167 38.3
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 5.9e-16 88.2 165 42.4
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.7e-15 86.7 138 45.7
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 2.2e-15 86.3 168 39.9
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 2.9e-15 85.9 165 40.0
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 5.0e-15 85.1 164 39.0
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 1.1e-14 84.0 133 42.9
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 2.5e-14 82.8 168 39.3
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 7.2e-14 81.3 161 40.4
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 2.1e-13 79.7 163 37.4
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.7e-13 79.3 171 39.2
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 4.7e-13 78.6 166 39.8
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 8.0e-13 77.8 168 39.9
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 5.2e-12 75.1 173 34.7
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 1.2e-11 73.9 173 36.4
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 2.0e-11 73.2 174 32.2
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 3.3e-11 72.4 151 38.4
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 5.7e-11 71.6 164 37.2
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 7.5e-11 71.2 152 38.2
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 1.7e-10 70.1 172 36.6
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 2.2e-10 69.7 171 35.1
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 2.2e-10 69.7 166 32.5
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 2.2e-10 69.7 172 36.6
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.7e-10 68.9 171 35.7
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 3.7e-10 68.9 166 35.5
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 6.3e-10 68.2 174 36.8
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 1.4e-09 67.0 156 35.9
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.1e-09 65.9 175 35.4
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 5.3e-09 65.1 175 37.7
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.3e-09 65.1 175 37.7
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 9.1e-09 64.3 165 35.2
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 1.2e-08 63.9 160 33.1
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.7e-08 62.8 152 36.2
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.7e-08 62.8 172 34.3
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 1.3e-07 60.5 174 32.8
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 2.2e-07 59.7 173 31.8
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 3.8e-07 58.9 152 35.5
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 5.0e-07 58.5 175 36.0
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 5.0e-07 58.5 165 32.7
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 8.5e-07 57.8 165 32.1
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 8.5e-07 57.8 166 33.7
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 8.5e-07 57.8 169 33.7
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 1.9e-06 56.6 166 31.9
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 1.9e-06 56.6 150 35.3
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 2.5e-06 56.2 149 34.9
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 3.2e-06 55.8 170 31.2
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 3.2e-06 55.8 171 32.2
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 5.5e-06 55.1 168 31.0
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 5.5e-06 55.1 168 31.0
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 5.5e-06 55.1 168 31.0


User provided reference genes

Program Settings