Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G024000 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 2.1e-67 258.8 126 100.0
Phvul.007G023900 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 1.8e-63 245.7 126 94.4
VMungo0720G0220 Vigna mungo HOM05D025486 ORTHO05D001508 4.4e-33 144.8 127 64.6
Glyma.20G008100 Glycine max HOM05D001667 ORTHO05D001508 1.6e-19 99.8 123 51.2
Glyma.20G112300 Glycine max HOM05D025486 ORTHO05D001508 3.2e-15 85.5 105 51.4
CiPaw.13G042700 Carya illinoinensis HOM05D001667 ORTHO05D001508 1.2e-14 83.6 114 41.2
Sed0010563 Sechium edule HOM05D001667 ORTHO05D001508 2.1e-14 82.8 120 37.5
QL04p047013 Quercus lobata HOM05D001667 ORTHO05D001508 4.6e-14 81.6 113 43.4
MELO3C019908.2 Cucumis melo HOM05D001667 ORTHO05D001508 1.7e-13 79.7 110 38.2
CsaV3_6G004370 Cucumis sativus L. HOM05D001667 ORTHO05D001508 1.7e-13 79.7 116 36.2
Thecc.10G115400 Theobroma cacao HOM05D010745 ORTHO05D013866 1.6e-11 73.2 128 36.7
ClCG08G008390 Citrullus lanatus HOM05D001667 ORTHO05D001508 2.1e-11 72.8 117 36.8
Sed0015032 Sechium edule HOM05D001667 ORTHO05D001508 4.8e-11 71.6 118 33.9
Potri.010G241400 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.2e-09 67.0 89 40.4
Prupe.7G099000 Prunus persica HOM05D001667 ORTHO05D001508 1.2e-09 67.0 93 37.6
Dinv08595 Davidia involucrata HOM05D010745 ORTHO05D013866 1.5e-09 66.6 111 32.4
Gohir.A13G009600 Gossypium hirsutum HOM05D010745 ORTHO05D013866 1.5e-09 66.6 108 38.0
TWI79G0041 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 1.5e-09 66.6 99 39.4
Oeu009316.1 Olea europaea HOM05D001667 ORTHO05D001508 3.4e-09 65.5 100 34.0
Manes.07G085401 Manihot esculenta HOM05D015231 ORTHO05D001508 4.5e-09 65.1 120 36.7
MBI17_g16778_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 5.8e-09 64.7 89 33.7
TAR636G2183 Trochodendron aralioides HOM05D001667 ORTHO05D001508 1.3e-08 63.5 97 32.0
Gohir.D13G010250 Gossypium hirsutum HOM05D010745 ORTHO05D013866 2.2e-08 62.8 108 37.0
Gohir.D13G010300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 2.2e-08 62.8 108 37.0
Gorai.013G011000 Gossypium raimondii HOM05D010745 ORTHO05D013866 2.2e-08 62.8 108 37.0
MD14G1034000 Malus domestica HOM05D001667 ORTHO05D001508 2.9e-08 62.4 96 34.4
Ciclev10017988m.g Citrus clementina HOM05D001667 ORTHO05D001508 3.8e-08 62.0 91 39.6
DCAR_009174 Daucus carota HOM05D001667 ORTHO05D001508 4.9e-08 61.6 98 30.6
MSTRG.5878 Avicennia marina HOM05D001667 ORTHO05D001508 6.4e-08 61.2 90 33.3
COL.COLO4_29621 Corchorus olitorius HOM05D001667 ORTHO05D001508 6.4e-08 61.2 92 34.8
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 6.4e-08 61.2 92 31.5
MD12G1033200 Malus domestica HOM05D001667 ORTHO05D001508 6.4e-08 61.2 96 34.4
Sabra06G0158900 Salix brachista HOM05D001667 ORTHO05D001508 6.4e-08 61.2 96 35.4
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 8.4e-08 60.8 88 33.0
TWI31G0336 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 8.4e-08 60.8 95 36.8
Oeu017706.1 Olea europaea HOM05D001667 ORTHO05D001508 1.1e-07 60.5 93 32.3
CiPaw.09G018100 Carya illinoinensis HOM05D001667 ORTHO05D001508 1.9e-07 59.7 95 32.6
Aqoxy4G02696 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 2.4e-07 59.3 96 34.4
Potri.016G073400 Populus trichocarpa HOM05D001667 ORTHO05D001508 2.4e-07 59.3 96 34.4
Thhalv10015029m.g Eutrema salsugineum HOM05D001667 ORTHO05D001508 3.2e-07 58.9 91 33.0
Gohir.A05G299300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 3.2e-07 58.9 109 37.6
BcaB01g05731 Brassica carinata HOM05D001667 ORTHO05D001508 4.2e-07 58.5 89 34.8
A03p02660 Brassica napus HOM05D001667 ORTHO05D001508 4.2e-07 58.5 89 34.8
Carub.0006s0516 Capsella rubella HOM05D001667 ORTHO05D001508 4.2e-07 58.5 98 31.6
Hma1.2p1_1178F.1_g264380 Hydrangea macrophylla HOM05D001667 ORTHO05D001508 4.2e-07 58.5 96 31.2
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 4.2e-07 58.5 119 29.4
Sabra16G0076200 Salix brachista HOM05D001667 ORTHO05D001508 4.2e-07 58.5 88 34.1
MSTRG.19292 Avicennia marina HOM05D001667 ORTHO05D001508 5.5e-07 58.2 98 31.6
Sc12g0004750 Simmondsia chinensis HOM05D001667 ORTHO05D001508 5.5e-07 58.2 90 35.6
BcaB04g18652 Brassica carinata HOM05D001667 ORTHO05D001508 7.1e-07 57.8 96 34.4
BraA03t09627Z Brassica rapa HOM05D001667 ORTHO05D001508 7.1e-07 57.8 89 33.7
CiPaw.10G014800 Carya illinoinensis HOM05D001667 ORTHO05D001508 7.1e-07 57.8 95 31.6
Dinv22798 Davidia involucrata HOM05D001667 ORTHO05D001508 7.1e-07 57.8 99 34.3
TAR623G1308 Trochodendron aralioides HOM05D001667 ORTHO05D001508 7.1e-07 57.8 94 29.8
A10p30140 Brassica napus HOM05D001667 ORTHO05D001508 9.3e-07 57.4 91 33.0
C03p03060 Brassica napus HOM05D001667 ORTHO05D001508 9.3e-07 57.4 96 33.3
C09p70550 Brassica napus HOM05D001667 ORTHO05D001508 9.3e-07 57.4 91 33.0
BraA10t45052Z Brassica rapa HOM05D001667 ORTHO05D001508 9.3e-07 57.4 91 33.0
Cfa016662 Carpinus fangiana HOM05D001667 ORTHO05D001508 9.3e-07 57.4 88 33.0
Manes.08G030700 Manihot esculenta HOM05D001667 ORTHO05D001508 9.3e-07 57.4 95 31.6
Sp6g36590 Schrenkiella parvula HOM05D001667 ORTHO05D001508 9.3e-07 57.4 91 33.0
Atru.chr8.1412 Acer truncatum HOM05D001667 ORTHO05D001508 1.2e-06 57.0 87 33.3
BcaC06g32346 Brassica carinata HOM05D001667 ORTHO05D001508 1.2e-06 57.0 91 33.0
BcaC06g32358 Brassica carinata HOM05D001667 ORTHO05D001508 1.2e-06 57.0 91 33.0
BcaC06g32359 Brassica carinata HOM05D001667 ORTHO05D001508 1.2e-06 57.0 91 33.0
BolC9t59800H Brassica oleracea HOM05D001667 ORTHO05D001508 1.2e-06 57.0 91 33.0
Ciclev10013147m.g Citrus clementina HOM05D001667 ORTHO05D001508 1.2e-06 57.0 95 33.7
Haze_19672 Corylus avellana HOM05D001667 ORTHO05D001508 1.2e-06 57.0 88 33.0
Gohir.A05G078800 Gossypium hirsutum HOM05D001667 ORTHO05D001508 1.2e-06 57.0 92 31.5
QL03p057079 Quercus lobata HOM05D001667 ORTHO05D001508 1.2e-06 57.0 96 32.3
C02p02640 Brassica napus HOM05D001667 ORTHO05D001508 1.6e-06 56.6 91 33.0
BolC2t06230H Brassica oleracea HOM05D001667 ORTHO05D001508 1.6e-06 56.6 91 33.0
CARHR206990 Cardamine hirsuta HOM05D001667 ORTHO05D001508 1.6e-06 56.6 91 31.9
Eucgr.J00276 Eucalyptus grandis HOM05D010745 ORTHO05D001508 1.6e-06 56.6 110 34.5
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 1.6e-06 56.6 87 29.9
Potri.006G206000 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.6e-06 56.6 96 33.3
Potri.009G161400 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.6e-06 56.6 86 29.1
Sed0009866 Sechium edule HOM05D001667 ORTHO05D001508 1.6e-06 56.6 92 37.0
Sed0022322 Sechium edule HOM05D001667 ORTHO05D001508 1.6e-06 56.6 90 35.6
Thecc.09G277000 Theobroma cacao HOM05D001667 ORTHO05D001508 1.6e-06 56.6 93 31.2
CSS0036703 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 2.1e-06 56.2 91 30.8
CSS0040873 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 2.1e-06 56.2 91 30.8
CDE04G1292 Ceratophyllum demersum HOM05D001667 ORTHO05D001508 2.1e-06 56.2 86 34.9
Sabra10G0188900 Salix brachista HOM05D001667 ORTHO05D001508 2.1e-06 56.2 93 37.6
AL6G16300 Arabidopsis lyrata HOM05D001667 ORTHO05D001508 2.7e-06 55.8 91 31.9
AT5G06270 Arabidopsis thaliana HOM05D001667 ORTHO05D001508 2.7e-06 55.8 91 31.9
Dinv21143 Davidia involucrata HOM05D001667 ORTHO05D001508 2.7e-06 55.8 95 30.5
Migut.L01911 Erythranthe guttata HOM05D001667 ORTHO05D001508 2.7e-06 55.8 91 31.9
FAN09G1589 Fragaria x ananassa HOM05D001667 ORTHO05D001508 2.7e-06 55.8 93 32.3
Gohir.D05G081700 Gossypium hirsutum HOM05D001667 ORTHO05D001508 2.7e-06 55.8 92 31.5
Gorai.009G083300 Gossypium raimondii HOM05D001667 ORTHO05D001508 2.7e-06 55.8 92 31.5
Oeu038096.1 Olea europaea HOM05D001667 ORTHO05D001508 2.7e-06 55.8 119 28.6
arahy.Tifrunner.gnm1.ann1.RWL9VQ Arachis hypogaea HOM05D015231 ORTHO05D019762 3.5e-06 55.5 45 53.3
BolC3t12854H Brassica oleracea HOM05D001667 ORTHO05D001508 3.5e-06 55.5 89 33.7
BraA02t04875Z Brassica rapa HOM05D001667 ORTHO05D001508 3.5e-06 55.5 91 31.9
Glyma.11G180600 Glycine max HOM05D001667 ORTHO05D001508 3.5e-06 55.5 86 30.2
PSO801G0813 Papaver somniferum HOM05D001667 ORTHO05D001508 3.5e-06 55.5 102 30.4
RcHm_v2.0_Chr3g0475171 Rosa chinensis HOM05D001667 ORTHO05D001508 3.5e-06 55.5 90 32.2
Sed0016026 Sechium edule HOM05D001667 ORTHO05D001508 3.5e-06 55.5 93 31.2
THA.LOC104816609 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 3.5e-06 55.5 94 34.0
TWI31G0736 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 3.5e-06 55.5 95 34.7
BcaB05g21676 Brassica carinata HOM05D001667 ORTHO05D001508 4.6e-06 55.1 91 31.9
ClCG04G010320 Citrullus lanatus HOM05D001667 ORTHO05D001508 4.6e-06 55.1 88 31.8
Gohir.A07G111600 Gossypium hirsutum HOM05D001667 ORTHO05D001508 4.6e-06 55.1 99 29.3
CDE12G0589 Ceratophyllum demersum HOM05D001667 ORTHO05D001508 6.0e-06 54.7 86 33.7
Duzib150G0725 Durio zibethinus HOM05D001667 ORTHO05D001508 6.0e-06 54.7 94 33.0
Gohir.A08G006901 Gossypium hirsutum HOM05D001667 ORTHO05D001508 6.0e-06 54.7 115 30.4
Gohir.D07G115300 Gossypium hirsutum HOM05D001667 ORTHO05D001508 6.0e-06 54.7 97 32.0
Gorai.001G123500 Gossypium raimondii HOM05D001667 ORTHO05D001508 6.0e-06 54.7 97 32.0
Lalb_Chr02g0154691 Lupinus albus HOM05D001667 ORTHO05D001508 6.0e-06 54.7 88 31.8
Nitab4.5_0002706g0040 Nicotiana tabacum HOM05D001667 ORTHO05D001508 6.0e-06 54.7 90 33.3
QL01p011687 Quercus lobata HOM05D001667 ORTHO05D001508 6.0e-06 54.7 96 31.2
arahy.Tifrunner.gnm1.ann1.DY9K7Z Arachis hypogaea HOM05D001667 ORTHO05D001508 7.9e-06 54.3 101 32.7
ECA248G3365 Erigeron canadensis HOM05D001667 ORTHO05D001508 7.9e-06 54.3 93 30.1
Gohir.A09G097500 Gossypium hirsutum HOM05D001667 ORTHO05D001508 7.9e-06 54.3 101 31.7
MD03G1151000 Malus domestica HOM05D001667 ORTHO05D001508 7.9e-06 54.3 96 30.2
Oeu010757.1 Olea europaea HOM05D001667 ORTHO05D001508 7.9e-06 54.3 94 29.8
QL07p037582 Quercus lobata HOM05D001667 ORTHO05D001508 7.9e-06 54.3 89 33.7
Rhsim03G0067600 Rhododendron simsii HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 31.1


User provided reference genes

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