Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G023900 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 9.4e-68 260.0 126 100.0
Phvul.007G024000 Phaseolus vulgaris HOM05D025486 ORTHO05D001508 1.1e-63 246.5 126 94.4
VMungo0720G0220 Vigna mungo HOM05D025486 ORTHO05D001508 1.9e-31 139.4 127 62.2
Glyma.20G008100 Glycine max HOM05D001667 ORTHO05D001508 1.2e-17 93.6 121 47.1
Glyma.20G112300 Glycine max HOM05D025486 ORTHO05D001508 2.2e-16 89.4 105 52.4
CiPaw.13G042700 Carya illinoinensis HOM05D001667 ORTHO05D001508 9.3e-15 84.0 114 41.2
Sed0010563 Sechium edule HOM05D001667 ORTHO05D001508 4.6e-14 81.6 114 37.7
QL04p047013 Quercus lobata HOM05D001667 ORTHO05D001508 7.9e-14 80.9 113 42.5
CsaV3_6G004370 Cucumis sativus L. HOM05D001667 ORTHO05D001508 1.1e-12 77.0 116 35.3
MELO3C019908.2 Cucumis melo HOM05D001667 ORTHO05D001508 1.5e-12 76.6 112 36.6
Sed0015032 Sechium edule HOM05D001667 ORTHO05D001508 1.1e-10 70.5 118 31.4
ClCG08G008390 Citrullus lanatus HOM05D001667 ORTHO05D001508 1.4e-10 70.1 117 36.8
Thecc.10G115400 Theobroma cacao HOM05D010745 ORTHO05D013866 5.3e-10 68.2 128 35.2
Dinv08595 Davidia involucrata HOM05D010745 ORTHO05D013866 4.5e-09 65.1 111 31.5
Potri.010G241400 Populus trichocarpa HOM05D001667 ORTHO05D001508 7.6e-09 64.3 89 39.3
TWI79G0041 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 9.9e-09 63.9 95 37.9
MBI17_g16778_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 1.3e-08 63.5 89 33.7
Prupe.7G099000 Prunus persica HOM05D001667 ORTHO05D001508 1.3e-08 63.5 93 36.6
Manes.07G085401 Manihot esculenta HOM05D015231 ORTHO05D001508 1.7e-08 63.2 120 36.7
Oeu009316.1 Olea europaea HOM05D001667 ORTHO05D001508 2.2e-08 62.8 100 33.0
Ciclev10017988m.g Citrus clementina HOM05D001667 ORTHO05D001508 2.9e-08 62.4 93 38.7
Gohir.A13G009600 Gossypium hirsutum HOM05D010745 ORTHO05D013866 2.9e-08 62.4 107 36.4
Oeu017706.1 Olea europaea HOM05D001667 ORTHO05D001508 3.8e-08 62.0 93 33.3
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 6.4e-08 61.2 93 32.3
TAR636G2183 Trochodendron aralioides HOM05D001667 ORTHO05D001508 6.4e-08 61.2 87 33.3
DCAR_009174 Daucus carota HOM05D001667 ORTHO05D001508 8.4e-08 60.8 98 31.6
Eucgr.J00276 Eucalyptus grandis HOM05D010745 ORTHO05D001508 8.4e-08 60.8 110 37.3
MD12G1033200 Malus domestica HOM05D001667 ORTHO05D001508 8.4e-08 60.8 96 34.4
MD14G1034000 Malus domestica HOM05D001667 ORTHO05D001508 8.4e-08 60.8 96 34.4
MSTRG.5878 Avicennia marina HOM05D001667 ORTHO05D001508 1.4e-07 60.1 90 33.3
COL.COLO4_29621 Corchorus olitorius HOM05D001667 ORTHO05D001508 1.4e-07 60.1 92 34.8
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 1.9e-07 59.7 88 33.0
TWI31G0336 Tripterygium wilfordii HOM05D001667 ORTHO05D001508 2.4e-07 59.3 93 35.5
Migut.L01911 Erythranthe guttata HOM05D001667 ORTHO05D001508 3.2e-07 58.9 91 33.0
Sabra06G0158900 Salix brachista HOM05D001667 ORTHO05D001508 3.2e-07 58.9 96 34.4
CiPaw.09G018100 Carya illinoinensis HOM05D001667 ORTHO05D001508 4.2e-07 58.5 96 33.3
Gohir.D13G010250 Gossypium hirsutum HOM05D010745 ORTHO05D013866 4.2e-07 58.5 108 35.2
Gohir.D13G010300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 4.2e-07 58.5 108 35.2
Gorai.013G011000 Gossypium raimondii HOM05D010745 ORTHO05D013866 4.2e-07 58.5 108 35.2
Aqoxy4G02696 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 5.5e-07 58.2 96 34.4
Oeu038096.1 Olea europaea HOM05D001667 ORTHO05D001508 5.5e-07 58.2 119 29.4
Dinv21143 Davidia involucrata HOM05D001667 ORTHO05D001508 7.1e-07 57.8 96 32.3
Dinv22798 Davidia involucrata HOM05D001667 ORTHO05D001508 9.3e-07 57.4 98 32.7
Nn2g14254 Nelumbo nucifera HOM05D001590 ORTHO05D001508 9.3e-07 57.4 119 29.4
Haze_19672 Corylus avellana HOM05D001667 ORTHO05D001508 1.2e-06 57.0 89 34.8
Gohir.A05G078800 Gossypium hirsutum HOM05D001667 ORTHO05D001508 1.2e-06 57.0 92 32.6
Potri.016G073400 Populus trichocarpa HOM05D001667 ORTHO05D001508 1.2e-06 57.0 96 33.3
CiPaw.10G014800 Carya illinoinensis HOM05D001667 ORTHO05D001508 1.6e-06 56.6 96 32.3
Ciclev10013147m.g Citrus clementina HOM05D001667 ORTHO05D001508 1.6e-06 56.6 95 33.7
MSTRG.19292 Avicennia marina HOM05D001667 ORTHO05D001508 2.1e-06 56.2 98 31.6
BcaB01g05731 Brassica carinata HOM05D001667 ORTHO05D001508 2.1e-06 56.2 89 33.7
A03p02660 Brassica napus HOM05D001667 ORTHO05D001508 2.1e-06 56.2 89 33.7
Cfa016662 Carpinus fangiana HOM05D001667 ORTHO05D001508 2.1e-06 56.2 89 33.7
Thhalv10015029m.g Eutrema salsugineum HOM05D001667 ORTHO05D001508 2.1e-06 56.2 91 31.9
FAN09G1589 Fragaria x ananassa HOM05D001667 ORTHO05D001508 2.1e-06 56.2 93 32.3
Manes.08G030700 Manihot esculenta HOM05D001667 ORTHO05D001508 2.1e-06 56.2 95 31.6
Sc12g0004750 Simmondsia chinensis HOM05D001667 ORTHO05D001508 2.1e-06 56.2 88 36.4
TAR623G1308 Trochodendron aralioides HOM05D001667 ORTHO05D001508 2.1e-06 56.2 94 29.8
Atru.chr8.1412 Acer truncatum HOM05D001667 ORTHO05D001508 2.7e-06 55.8 87 33.3
Gohir.D05G081700 Gossypium hirsutum HOM05D001667 ORTHO05D001508 2.7e-06 55.8 92 32.6
Gorai.009G083300 Gossypium raimondii HOM05D001667 ORTHO05D001508 2.7e-06 55.8 92 32.6
Hma1.2p1_1178F.1_g264380 Hydrangea macrophylla HOM05D001667 ORTHO05D001508 2.7e-06 55.8 88 31.8
Oeu010757.1 Olea europaea HOM05D001667 ORTHO05D001508 2.7e-06 55.8 94 30.9
Potri.009G161400 Populus trichocarpa HOM05D001667 ORTHO05D001508 2.7e-06 55.8 86 29.1
Sabra16G0076200 Salix brachista HOM05D001667 ORTHO05D001508 2.7e-06 55.8 88 33.0
EL10Ac7g16821 Beta vulgaris HOM05D001667 ORTHO05D001508 3.5e-06 55.5 87 33.3
BraA03t09627Z Brassica rapa HOM05D001667 ORTHO05D001508 3.5e-06 55.5 89 32.6
Carub.0006s0516 Capsella rubella HOM05D001667 ORTHO05D001508 3.5e-06 55.5 98 30.6
CARHR206990 Cardamine hirsuta HOM05D001667 ORTHO05D001508 3.5e-06 55.5 91 31.9
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 3.5e-06 55.5 87 32.2
A10p30140 Brassica napus HOM05D001667 ORTHO05D001508 4.6e-06 55.1 91 31.9
C09p70550 Brassica napus HOM05D001667 ORTHO05D001508 4.6e-06 55.1 91 31.9
BraA10t45052Z Brassica rapa HOM05D001667 ORTHO05D001508 4.6e-06 55.1 91 31.9
Gohir.A05G299300 Gossypium hirsutum HOM05D010745 ORTHO05D013866 4.6e-06 55.1 109 35.8
Potri.006G206000 Populus trichocarpa HOM05D001667 ORTHO05D001508 4.6e-06 55.1 96 33.3
Sp6g36590 Schrenkiella parvula HOM05D001667 ORTHO05D001508 4.6e-06 55.1 91 31.9
Sed0022322 Sechium edule HOM05D001667 ORTHO05D001508 4.6e-06 55.1 93 35.5
BcaC06g32346 Brassica carinata HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 31.9
BcaC06g32358 Brassica carinata HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 31.9
BcaC06g32359 Brassica carinata HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 31.9
C03p03060 Brassica napus HOM05D001667 ORTHO05D001508 6.0e-06 54.7 96 32.3
BolC9t59800H Brassica oleracea HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 31.9
CSS0036703 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 30.8
CSS0040873 Camellia sinensis var. sinensis HOM05D001667 ORTHO05D001508 6.0e-06 54.7 91 30.8
Hma1.2p1_0064F.1_g034920 Hydrangea macrophylla HOM05D001667 ORTHO05D001508 6.0e-06 54.7 94 30.9
THA.LOC104816609 Tarenaya hassleriana HOM05D001667 ORTHO05D001508 6.0e-06 54.7 94 34.0
BcaB04g18652 Brassica carinata HOM05D001667 ORTHO05D001508 7.9e-06 54.3 96 33.3
C02p02640 Brassica napus HOM05D001667 ORTHO05D001508 7.9e-06 54.3 91 31.9
BolC2t06230H Brassica oleracea HOM05D001667 ORTHO05D001508 7.9e-06 54.3 91 31.9
FvH4_6g19800 Fragaria vesca HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 32.2
FAN02G0800 Fragaria x ananassa HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 32.2
FAN05G2851 Fragaria x ananassa HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 32.2
Oeu009064.1 Olea europaea HOM05D001667 ORTHO05D001508 7.9e-06 54.3 99 33.3
RcHm_v2.0_Chr3g0475171 Rosa chinensis HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 32.2
Thecc.09G277000 Theobroma cacao HOM05D001667 ORTHO05D001508 7.9e-06 54.3 90 30.0
TPR.G8730 Trifolium pratense HOM05D001667 ORTHO05D001508 7.9e-06 54.3 93 31.2


User provided reference genes

Program Settings