Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G023500 Phaseolus vulgaris HOM05D007506 ORTHO05D008409 6.4e-39 163.7 88 100.0
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 3.4e-32 141.4 89 87.6
Glyma.10G277900 Glycine max HOM05D007506 ORTHO05D008409 9.0e-25 116.7 86 77.9
Glyma.20G110900 Glycine max HOM05D007506 ORTHO05D008409 9.3e-22 106.7 87 73.6
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 6.7e-20 100.5 84 69.0
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 8.7e-20 100.1 84 70.2
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 9.7e-19 96.7 84 66.7
TPR.G2499 Trifolium pratense HOM05D007506 ORTHO05D008409 1.6e-18 95.9 71 73.2
Psat6g238400 Pisum sativum HOM05D007506 ORTHO05D008409 2.4e-17 92.0 56 82.1
arahy.Tifrunner.gnm1.ann1.DEP6R1 Arachis hypogaea HOM05D007506 ORTHO05D008409 5.9e-16 87.4 50 88.0
arahy.Tifrunner.gnm1.ann1.MBF964 Arachis hypogaea HOM05D007506 ORTHO05D008409 5.9e-16 87.4 50 88.0
Lalb_Chr02g0146201 Lupinus albus HOM05D007506 ORTHO05D008409 2.9e-15 85.1 65 78.5
Lalb_Chr06g0166331 Lupinus albus HOM05D007506 ORTHO05D008409 7.2e-14 80.5 78 67.9
arahy.Tifrunner.gnm1.ann1.KXIJ9T Arachis hypogaea HOM05D007506 ORTHO05D008409 7.9e-13 77.0 57 75.4
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 1.1e-11 73.2 64 67.2
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 3.7e-10 68.2 59 69.5
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 8.2e-10 67.0 96 50.0
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.4e-09 66.2 85 56.5
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 2.4e-09 65.5 90 54.4
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 1.5e-08 62.8 65 64.6
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 1.5e-08 62.8 62 66.1
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.5e-08 62.8 79 58.2
arahy.Tifrunner.gnm1.ann1.X5G790 Arachis hypogaea HOM05D007506 ORTHO05D008409 3.4e-08 61.6 42 76.2
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 3.4e-08 61.6 82 53.7
AL6G14410 Arabidopsis lyrata HOM05D012863 ORTHO05D008409 4.5e-08 61.2 84 46.4
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 4.5e-08 61.2 62 64.5
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 4.5e-08 61.2 60 68.3
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 1.3e-07 59.7 64 68.8
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 1.7e-07 59.3 61 62.3
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 2.2e-07 58.9 57 63.2
arahy.Tifrunner.gnm1.ann1.C6ZGU5 Arachis hypogaea HOM05D007506 ORTHO05D008409 2.9e-07 58.5 38 76.3
HanXRQChr12g0368271 Helianthus annuus HOM05D021830 ORTHO05D008409 2.9e-07 58.5 57 63.2
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 2.9e-07 58.5 88 52.3
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 2.9e-07 58.5 86 53.5
Aqoxy7G00782 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 3.8e-07 58.2 59 61.0
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 5.0e-07 57.8 55 63.6
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 5.0e-07 57.8 62 61.3
Oeu027974.1 Olea europaea HOM05D007506 ORTHO05D008409 5.0e-07 57.8 57 61.4
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 5.0e-07 57.8 82 54.9
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 6.5e-07 57.4 55 56.4
CARHR208540 Cardamine hirsuta HOM05D012863 ORTHO05D008409 8.5e-07 57.0 75 56.0
arahy.Tifrunner.gnm1.ann1.HD4K12 Arachis hypogaea HOM05D000602 ORTHO05D085448 1.1e-06 56.6 33 81.8
EL10Ac4g08692 Beta vulgaris HOM05D007506 ORTHO05D008409 1.1e-06 56.6 88 47.7
Carub.0006s0364 Capsella rubella HOM05D012863 ORTHO05D008409 1.1e-06 56.6 77 49.4
AUR62042085 Chenopodium quinoa HOM05D007506 ORTHO05D008409 1.4e-06 56.2 64 62.5
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 1.4e-06 56.2 87 49.4
Solyc11g006750.1 Solanum lycopersicum HOM05D007506 ORTHO05D008409 1.4e-06 56.2 57 61.4
Sopen11g002680 Solanum pennellii HOM05D007506 ORTHO05D008409 1.9e-06 55.8 57 61.4
AT5G04750 Arabidopsis thaliana HOM05D012863 ORTHO05D008409 2.5e-06 55.5 73 50.7
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 3.2e-06 55.1 63 58.7
PGSC0003DMG400023979 Solanum tuberosum HOM05D007506 ORTHO05D008409 4.2e-06 54.7 57 59.6
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 5.5e-06 54.3 59 59.3
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 5.5e-06 54.3 87 49.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 5.5e-06 54.3 53 60.4
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 7.2e-06 53.9 87 48.3
CsaV3_6G004310 Cucumis sativus L. HOM05D007506 ORTHO05D008409 9.4e-06 53.5 55 63.6


User provided reference genes

Program Settings