Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 5.3e-136 487.6 242 100.0
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 1.1e-128 463.4 242 92.6
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.2e-124 449.9 242 89.7
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 1.3e-118 429.9 242 84.3
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.8e-115 419.5 240 81.2
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.2e-114 416.8 240 81.7
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 7.5e-114 414.1 241 81.7
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 4.9e-113 411.4 237 81.4
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 8.3e-113 410.6 241 81.7
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 2.4e-112 409.1 240 80.0
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 3.2e-112 408.7 241 81.3
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.6e-103 379.8 240 75.0
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 3.9e-102 375.2 241 75.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 2.1e-100 369.4 241 72.6
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.2e-98 363.6 241 72.2
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 1.5e-98 363.2 241 71.4
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.0e-98 362.8 241 71.4
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 4.4e-98 361.7 241 69.7
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 5.8e-98 361.3 241 71.0
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 5.8e-98 361.3 240 70.0
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 9.9e-98 360.5 240 70.0
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.3e-97 360.1 239 77.8
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 1.3e-97 360.1 241 71.0
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.7e-97 359.8 241 70.5
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.7e-97 359.8 241 71.4
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.7e-97 359.8 240 70.0
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 1.7e-97 359.8 241 68.9
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 4.9e-97 358.2 241 69.3
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 8.3e-97 357.5 240 69.6
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 1.9e-96 356.3 238 69.7
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 4.1e-96 355.1 241 68.9
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 5.4e-96 354.8 240 69.6
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 9.2e-96 354.0 241 69.7
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.5e-95 352.1 241 68.5
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 7.8e-95 350.9 239 69.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.3e-94 350.1 241 69.3
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.0e-94 349.0 241 66.8
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 8.6e-94 347.4 241 67.2
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 8.6e-94 347.4 240 67.5
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.5e-93 345.9 240 69.6
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 3.3e-93 345.5 241 67.6
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 3.3e-93 345.5 241 67.6
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.3e-93 345.5 241 66.8
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 4.3e-93 345.1 241 67.2
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 7.3e-93 344.4 241 66.4
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 7.3e-93 344.4 241 66.4
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.6e-93 344.0 241 66.4
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.6e-92 342.0 241 68.5
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.6e-92 342.0 241 66.4
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 8.1e-92 340.9 241 68.0
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 8.1e-92 340.9 241 68.0
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 1.1e-91 340.5 241 67.6
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 1.8e-91 339.7 238 67.2
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.4e-91 339.3 241 66.4
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 3.1e-91 339.0 287 59.2
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.0e-91 338.6 241 68.9
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 4.0e-91 338.6 240 66.2
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.2e-91 338.2 239 67.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 6.8e-91 337.8 240 66.2
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.2e-90 337.0 241 66.0
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.2e-90 337.0 241 66.4
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 3.4e-90 335.5 237 67.5
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 7.6e-90 334.3 241 66.8
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.9e-90 334.0 255 63.5
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 3.8e-89 332.0 244 66.8
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 9.3e-88 327.4 241 63.9
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.1e-87 326.2 241 65.6
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 3.5e-87 325.5 240 64.2
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.0e-86 323.9 236 64.4
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 1.7e-86 323.2 241 64.3
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 2.3e-86 322.8 241 66.0
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 3.9e-86 322.0 236 64.0
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.4e-83 313.5 224 64.7
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.8e-83 313.2 241 62.7
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 3.1e-83 312.4 239 61.5
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 6.9e-83 311.2 237 61.6
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.2e-82 310.5 241 62.7
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 4.2e-80 302.0 235 59.1
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.6e-79 300.1 240 59.2
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 3.5e-79 298.9 240 59.6
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 6.0e-79 298.1 241 57.7
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.0e-78 295.8 276 54.3
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.5e-77 292.7 237 57.8
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 6.2e-76 288.1 241 60.6
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 1.4e-75 287.0 184 67.9
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 1.3e-70 270.4 184 66.8
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 3.3e-69 265.8 233 53.6
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.6e-69 265.0 233 53.2
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 7.6e-66 254.6 183 63.9
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 1.0e-65 254.2 183 66.1
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.4e-64 250.4 182 65.9
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 7.1e-64 248.1 183 62.8
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.0e-62 244.2 183 63.9
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.3e-62 243.8 183 64.5
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.3e-62 243.8 229 51.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 9.6e-61 237.7 238 46.6
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 8.2e-60 234.6 239 44.8
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 1.2e-55 220.7 231 45.9
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.6e-55 220.3 230 50.0
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 4.6e-55 218.8 181 57.5
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 5.7e-53 211.8 207 47.8
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.3e-52 210.7 188 57.4
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.2e-52 209.9 239 43.5
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 4.8e-52 208.8 216 48.1
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 5.5e-48 195.3 148 55.4
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 9.4e-48 194.5 179 56.4
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 4.5e-42 175.6 110 69.1
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 1.1e-37 161.0 180 40.0
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.6e-34 149.8 182 43.4
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.3e-33 147.5 241 40.7
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 3.0e-30 136.3 208 34.6
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.1e-24 117.9 106 54.7
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 2.0e-21 107.1 243 27.6


User provided reference genes

Program Settings