Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.6e-172 609.4 310 100.0
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 1.3e-129 466.8 279 88.2
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 2.1e-108 396.4 272 78.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 4.8e-97 358.6 284 68.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 8.2e-97 357.8 280 70.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.0e-94 350.9 284 66.9
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.3e-89 334.0 282 65.6
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 1.3e-86 323.9 272 65.8
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.2e-76 290.8 279 56.3
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.1e-76 290.0 280 55.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 3.6e-76 289.3 270 59.3
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.0e-75 287.7 275 56.7
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.0e-75 287.7 270 60.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-74 282.7 320 53.4
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 7.5e-74 281.6 291 54.0
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.3e-73 280.8 292 54.8
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.8e-73 278.9 281 55.5
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 6.3e-73 278.5 281 55.5
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 8.2e-73 278.1 280 55.4
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.8e-72 276.9 281 55.5
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.4e-72 276.6 266 61.7
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-71 273.9 274 55.5
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 3.5e-71 272.7 292 56.2
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-70 270.8 289 55.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.7e-70 270.4 281 55.5
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 6.5e-70 268.5 286 54.2
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 8.5e-70 268.1 295 54.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 8.5e-70 268.1 289 51.9
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.5e-69 267.3 296 53.7
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.5e-69 267.3 280 53.9
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.9e-69 266.9 282 53.5
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.9e-69 266.9 281 56.2
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.5e-69 266.5 275 56.4
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 2.5e-69 266.5 280 53.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 9.4e-69 264.6 287 51.6
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.2e-68 264.2 285 53.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.6e-68 263.8 287 52.6
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 2.7e-68 263.1 279 52.3
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 8.0e-68 261.5 287 53.7
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.0e-67 261.2 289 51.9
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.0e-67 261.2 288 52.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.4e-67 260.8 288 52.1
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 1.2e-66 257.7 281 52.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 2.6e-66 256.5 288 51.4
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 5.7e-66 255.4 276 53.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.3e-65 254.2 284 49.3
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 1.3e-65 254.2 273 52.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 1.7e-65 253.8 280 52.1
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 3.1e-64 249.6 277 52.0
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 7.0e-64 248.4 285 50.2
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 2.0e-63 246.9 309 48.2
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 3.5e-63 246.1 281 50.2
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 4.5e-63 245.7 278 50.7
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 4.5e-63 245.7 280 47.1
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 1.7e-62 243.8 270 52.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.9e-62 243.0 283 48.4
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 5.0e-62 242.3 279 48.0
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 6.5e-62 241.9 284 47.2
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 6.5e-62 241.9 280 50.4
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.1e-61 241.1 281 50.5
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.5e-61 240.7 282 47.9
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.9e-61 240.4 281 50.2
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 2.5e-61 240.0 279 48.4
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 2.5e-61 240.0 279 48.4
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.5e-61 240.0 282 49.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 3.3e-61 239.6 281 52.0
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 3.3e-61 239.6 287 49.8
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 3.3e-61 239.6 283 47.0
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 4.2e-61 239.2 284 46.1
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.6e-60 237.3 295 47.1
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.6e-60 236.1 289 49.5
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 4.7e-60 235.7 282 45.7
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 8.0e-60 235.0 267 50.2
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.4e-59 234.2 289 48.4
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 4.0e-59 232.6 283 49.1
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 8.9e-59 231.5 287 47.4
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 8.9e-59 231.5 284 46.1
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 2.6e-58 229.9 391 40.9
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 4.4e-58 229.2 283 45.6
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.3e-57 227.6 271 48.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.1e-56 224.6 266 50.0
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.4e-56 224.2 270 50.0
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.4e-56 224.2 281 47.7
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 9.2e-56 221.5 288 47.2
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.0e-54 218.0 278 46.8
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 1.1e-53 214.5 282 46.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.9e-53 213.8 268 47.4
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 4.9e-49 199.1 265 46.0
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 5.4e-48 195.7 209 54.5
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.1e-45 188.0 279 45.2
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.5e-45 187.6 213 50.2
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 5.6e-45 185.7 235 51.1
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 7.3e-45 185.3 334 38.3
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 3.6e-44 183.0 116 81.9
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 2.9e-41 173.3 225 48.0
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 4.9e-41 172.6 316 39.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.6e-36 157.5 203 47.8
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.1e-36 157.1 200 48.0
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.8e-35 154.1 241 43.2
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.9e-33 146.7 326 32.2
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 3.2e-32 143.3 312 34.3
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 8.4e-25 118.6 150 47.3
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.1e-24 116.3 132 51.5
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 3.6e-20 103.2 250 30.4
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 3.6e-20 103.2 173 43.4
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.6e-18 97.1 169 36.7
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-16 91.7 76 61.8
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 1.1e-16 91.7 65 66.2
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 4.2e-16 89.7 112 50.9
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 5.4e-16 89.4 90 54.4
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.2e-15 88.2 138 42.8
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.3e-14 84.7 407 25.1
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.0e-11 72.0 228 27.6
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.5e-10 71.2 53 66.0
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.6e-10 68.9 55 60.0
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.9e-10 68.6 186 27.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.7e-09 67.8 40 72.5
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 3.5e-07 60.1 44 65.9
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.0e-06 58.5 42 69.0


User provided reference genes

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