Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 5.5e-92 340.9 164 100.0
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 1.4e-84 316.2 162 93.2
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 2.6e-73 278.9 160 85.6
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 1.2e-65 253.4 162 75.9
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 1.2e-65 253.4 162 75.3
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.0e-61 240.4 163 71.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 2.9e-61 238.8 150 76.0
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 5.0e-61 238.0 163 71.2
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 8.5e-61 237.3 164 71.3
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 4.7e-59 231.5 162 68.5
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 4.0e-58 228.4 164 70.7
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 5.4e-55 218.0 158 63.9
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 2.0e-54 216.1 161 65.8
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 5.9e-54 214.5 148 66.9
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 7.7e-54 214.2 161 64.0
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.3e-53 213.4 160 65.6
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.9e-53 212.2 150 67.3
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 2.9e-53 212.2 162 64.2
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 5.0e-53 211.5 159 64.2
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 6.5e-53 211.1 162 62.3
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 8.6e-53 210.7 162 64.2
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 8.6e-53 210.7 159 65.4
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 1.1e-52 210.3 148 68.9
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 1.9e-52 209.5 151 64.2
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 2.5e-52 209.1 159 63.5
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 7.2e-52 207.6 162 61.1
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 9.5e-52 207.2 162 63.6
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 1.6e-51 206.5 150 67.3
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 2.1e-51 206.1 163 61.3
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 4.7e-51 204.9 152 65.1
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 6.1e-51 204.5 142 68.3
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 6.1e-51 204.5 162 63.0
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 1.4e-50 203.4 152 65.8
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 1.8e-50 203.0 152 65.1
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.8e-50 203.0 162 62.3
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 1.8e-50 203.0 148 66.2
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 2.3e-50 202.6 161 63.4
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.3e-50 202.6 149 64.4
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 4.0e-50 201.8 155 61.9
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 5.2e-50 201.4 152 66.4
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 5.2e-50 201.4 163 59.5
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 5.2e-50 201.4 140 67.1
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 1.2e-49 200.3 144 64.6
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 1.5e-49 199.9 143 65.7
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 2.0e-49 199.5 152 64.5
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 2.0e-49 199.5 151 64.2
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 3.4e-49 198.7 151 64.9
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 5.7e-49 198.0 160 59.4
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.7e-49 198.0 149 63.1
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 9.8e-49 197.2 140 66.4
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 9.8e-49 197.2 160 59.4
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 1.7e-48 196.4 148 61.5
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 2.8e-48 195.7 148 63.5
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 2.8e-48 195.7 161 57.8
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 3.7e-48 195.3 149 63.8
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 3.7e-48 195.3 152 63.2
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 4.9e-48 194.9 150 62.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 4.9e-48 194.9 151 62.9
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 8.3e-48 194.1 180 55.0
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 1.1e-47 193.7 148 61.5
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.8e-47 193.0 139 63.3
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 4.1e-47 191.8 145 63.4
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 5.4e-47 191.4 149 61.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 1.2e-46 190.3 155 62.6
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 1.6e-46 189.9 149 61.7
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 2.0e-46 189.5 148 61.5
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 3.5e-46 188.7 213 47.9
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 1.7e-45 186.4 162 58.6
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 1.7e-45 186.4 140 62.1
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 2.9e-45 185.7 154 58.4
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 3.8e-45 185.3 141 64.5
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 2.5e-44 182.6 141 61.7
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 3.3e-44 182.2 162 58.6
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 4.3e-44 181.8 145 59.3
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 5.6e-44 181.4 144 56.9
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 4.7e-43 178.3 150 56.7
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 4.7e-43 178.3 148 54.1
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 6.1e-43 177.9 173 53.2
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.0e-42 177.2 164 55.5
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.8e-42 176.4 140 60.7
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.0e-41 172.9 143 61.5
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 4.4e-41 171.8 147 55.1
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 1.6e-38 163.3 147 54.4
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 1.3e-32 143.7 114 59.6
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 1.7e-32 143.3 128 52.3
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 2.9e-32 142.5 167 44.3
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 4.7e-27 125.2 140 44.3
Cc00_g07880 Coffea canephora HOM05D007563 ORTHO05D009546 6.4e-24 114.8 64 81.2
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.4e-23 113.6 99 53.5
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 7.8e-22 107.8 133 39.8
Migut.O00860 Erythranthe guttata HOM05D007563 ORTHO05D009546 4.0e-18 95.5 67 64.2
Migut.L00866 Erythranthe guttata HOM05D007563 ORTHO05D009546 6.8e-18 94.7 95 50.5
Lj5g0009856 Lotus japonicus HOM05D007563 ORTHO05D009546 5.4e-15 85.1 73 61.6
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 5.1e-13 78.6 67 53.7
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 1.1e-12 77.4 104 36.5
Duzib132G1246 Durio zibethinus HOM05D007563 ORTHO05D009546 1.5e-12 77.0 101 43.6
Duzib132G0714 Durio zibethinus HOM05D007563 ORTHO05D009546 4.3e-12 75.5 101 40.6
CBR_g24157 Chara braunii HOM05D007563 ORTHO05D009546 2.4e-10 69.7 64 51.6


User provided reference genes

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