Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G014500 Phaseolus vulgaris HOM05D006471 ORTHO05D008157 1.1e-220 769.6 375 100.0
VMungo0720G2382 Vigna mungo HOM05D006471 ORTHO05D008157 3.9e-202 708.0 375 91.2
Glyma.10G286400 Glycine max HOM05D006471 ORTHO05D008157 1.1e-177 626.7 378 83.9
Psat6g234000 Pisum sativum HOM05D006471 ORTHO05D008157 1.8e-162 576.2 371 77.9
Lj5g0013377 Lotus japonicus HOM05D006471 ORTHO05D008157 3.0e-162 575.5 381 78.7
TPR.G4059 Trifolium pratense HOM05D006471 ORTHO05D008157 2.2e-157 559.3 370 77.0
Medtr1g114560 Medicago truncatula HOM05D006471 ORTHO05D008157 6.3e-152 541.2 373 75.1
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 1.2e-150 537.0 364 74.7
Lalb_Chr06g0163931 Lupinus albus HOM05D006471 ORTHO05D008157 1.9e-148 529.6 356 75.0
Ca_11258_v3 Cicer arietinum L. HOM05D000200 ORTHO05D001546 4.0e-138 495.4 290 83.4
arahy.Tifrunner.gnm1.ann1.V4ETXF Arachis hypogaea HOM05D006471 ORTHO05D008157 3.5e-134 482.3 484 57.2
Haze_11788 Corylus avellana HOM05D006471 ORTHO05D008157 2.8e-123 446.0 368 62.2
CiPaw.05G172000 Carya illinoinensis HOM05D006471 ORTHO05D008157 4.4e-121 438.7 369 60.7
Cfa008776 Carpinus fangiana HOM05D006471 ORTHO05D008157 6.4e-120 434.9 368 60.9
Manes.04G162800 Manihot esculenta HOM05D006471 ORTHO05D008157 1.4e-119 433.7 381 60.1
CSS0032634 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 9.5e-116 421.0 375 60.0
CsaV3_5G029010 Cucumis sativus L. HOM05D006471 ORTHO05D008157 2.8e-115 419.5 364 61.0
CSS0035224 Camellia sinensis var. sinensis HOM05D006471 ORTHO05D008157 8.1e-115 417.9 375 59.5
Eucgr.G02586 Eucalyptus grandis HOM05D006471 ORTHO05D008157 8.1e-115 417.9 311 67.2
CANSAT78G1799 Cannabis sativa HOM05D006471 ORTHO05D008157 6.8e-114 414.8 372 59.9
Ciclev10031833m.g Citrus clementina HOM05D006471 ORTHO05D008157 6.8e-114 414.8 381 57.7
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.4e-113 412.1 347 61.7
RcHm_v2.0_Chr4g0446941 Rosa chinensis HOM05D006471 ORTHO05D008157 7.5e-113 411.4 310 67.4
Hma1.2p1_0044F.1_g026290 Hydrangea macrophylla HOM05D006471 ORTHO05D008157 2.2e-112 409.8 380 59.2
FvH4_4g37140 Fragaria vesca HOM05D006471 ORTHO05D008157 2.9e-112 409.5 383 59.3
Atru.chr11.1240 Acer truncatum HOM05D006471 ORTHO05D008157 6.4e-112 408.3 375 56.8
Glyma.20G102800 Glycine max HOM05D006471 ORTHO05D008157 1.4e-111 407.1 319 67.7
Dinv17647 Davidia involucrata HOM05D000200 ORTHO05D001546 2.4e-111 406.4 342 62.0
Cpa.g.sc60.91 Carica papaya HOM05D006471 ORTHO05D008157 7.1e-111 404.8 362 60.5
TAR628G0373 Trochodendron aralioides HOM05D006471 ORTHO05D008157 3.5e-110 402.5 368 57.9
TWI77G0721 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 1.3e-109 400.6 384 57.0
Actinidia04343 Actinidia chinensis HOM05D006471 ORTHO05D008157 1.7e-109 400.2 310 65.5
PGR142G1667 Punica granatum HOM05D006471 ORTHO05D008157 5.1e-109 398.7 370 58.1
PSO782G0560 Papaver somniferum HOM05D006471 ORTHO05D008157 6.6e-109 398.3 372 57.0
ClCG02G014150 Citrullus lanatus HOM05D006471 ORTHO05D008157 1.9e-108 396.7 403 54.6
Potri.007G075500 Populus trichocarpa HOM05D006471 ORTHO05D008157 2.5e-108 396.4 389 57.6
TWI74G1585 Tripterygium wilfordii HOM05D006471 ORTHO05D008157 3.3e-108 396.0 374 56.1
Thecc.02G154800 Theobroma cacao HOM05D006471 ORTHO05D008157 4.3e-108 395.6 360 60.0
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 2.8e-107 392.9 360 57.8
MD16G1004200 Malus domestica HOM05D006471 ORTHO05D008157 2.4e-106 389.8 305 66.9
Peaxi162Scf00681g00221 Petunia axillaris HOM05D006471 ORTHO05D008157 2.4e-106 389.8 372 55.9
Nitab4.5_0005997g0050 Nicotiana tabacum HOM05D006471 ORTHO05D008157 3.1e-106 389.4 366 58.7
Sed0003381 Sechium edule HOM05D006471 ORTHO05D008157 3.1e-106 389.4 362 59.7
Gohir.A04G109424 Gossypium hirsutum HOM05D006471 ORTHO05D008157 5.2e-106 388.7 361 57.6
Gorai.012G135400 Gossypium raimondii HOM05D006471 ORTHO05D008157 5.2e-106 388.7 366 58.5
Nitab4.5_0004979g0070 Nicotiana tabacum HOM05D006471 ORTHO05D008157 5.2e-106 388.7 349 59.9
CARHR204730 Cardamine hirsuta HOM05D006471 ORTHO05D008157 1.5e-105 387.1 375 55.5
Gohir.D04G148900 Gossypium hirsutum HOM05D006471 ORTHO05D008157 4.4e-105 385.6 361 57.3
PSO170G1614 Papaver somniferum HOM05D006471 ORTHO05D008157 4.4e-105 385.6 372 56.2
Carub.0006s0724 Capsella rubella HOM05D006471 ORTHO05D008157 5.8e-105 385.2 374 56.4
Duzib132G0448 Durio zibethinus HOM05D006471 ORTHO05D008157 7.6e-105 384.8 358 55.9
THA.LOC104818378 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 7.6e-105 384.8 325 62.5
CAN.G274.15 Capsicum annuum HOM05D006471 ORTHO05D008157 9.9e-105 384.4 376 56.1
MBI06_g44273_MAGBIO Magnolia biondii HOM05D006471 ORTHO05D008157 1.7e-104 383.6 375 55.5
Sopen04g004170 Solanum pennellii HOM05D006471 ORTHO05D008157 2.2e-104 383.3 375 56.0
MSTRG.8091 Avicennia marina HOM05D006471 ORTHO05D008157 3.8e-104 382.5 327 60.9
PGSC0003DMG400011512 Solanum tuberosum HOM05D006471 ORTHO05D008157 3.8e-104 382.5 375 56.3
Sabra07G0063800 Salix brachista HOM05D006471 ORTHO05D008157 6.4e-104 381.7 295 66.8
AL6G18780 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 8.4e-104 381.3 374 55.6
GSVIVG01034416001 Vitis vinifera HOM05D006471 ORTHO05D008157 1.1e-103 380.9 287 67.2
Solyc04g008990.3 Solanum lycopersicum HOM05D006471 ORTHO05D008157 1.4e-103 380.6 304 63.2
COL.COLO4_33107 Corchorus olitorius HOM05D006471 ORTHO05D008157 2.4e-103 379.8 359 56.3
A03p03780 Brassica napus HOM05D006471 ORTHO05D008157 7.8e-102 374.8 371 56.3
C03p04260 Brassica napus HOM05D006471 ORTHO05D008157 7.8e-102 374.8 371 56.3
BolC3t12958H Brassica oleracea HOM05D006471 ORTHO05D008157 7.8e-102 374.8 371 56.3
Thhalv10013886m.g Eutrema salsugineum HOM05D006471 ORTHO05D008157 7.8e-102 374.8 375 54.4
BraA03t09725Z Brassica rapa HOM05D006471 ORTHO05D008157 1.0e-101 374.4 371 56.1
Nn2g12513 Nelumbo nucifera HOM05D006471 ORTHO05D008157 1.0e-101 374.4 296 62.5
Duzib248G0471 Durio zibethinus HOM05D000200 ORTHO05D001546 3.9e-101 372.5 292 64.0
MSTRG.428 Avicennia marina HOM05D006471 ORTHO05D008157 6.6e-101 371.7 299 62.9
BcaB01g05607 Brassica carinata HOM05D006471 ORTHO05D008157 6.6e-101 371.7 299 63.2
AT5G23330 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 1.1e-100 370.9 331 57.4
Sp6g34600 Schrenkiella parvula HOM05D006471 ORTHO05D008157 1.5e-100 370.5 368 54.6
Ah.16g106450 Amaranthus hybridus HOM05D000154 ORTHO05D000092 1.9e-100 370.2 299 63.2
AUR62032950 Chenopodium quinoa HOM05D006471 ORTHO05D008157 1.9e-100 370.2 292 62.7
AT5G08340 Arabidopsis thaliana HOM05D006471 ORTHO05D008157 4.3e-100 369.0 371 54.4
AUR62017731 Chenopodium quinoa HOM05D006471 ORTHO05D008157 4.3e-100 369.0 303 61.1
BcaB01g05611 Brassica carinata HOM05D006471 ORTHO05D008157 5.6e-100 368.6 346 56.1
THA.LOC104800739 Tarenaya hassleriana HOM05D006471 ORTHO05D008157 5.6e-100 368.6 373 55.0
MELO3C011756.2 Cucumis melo HOM05D006471 ORTHO05D008157 7.3e-100 368.2 476 46.6
DCAR_002605 Daucus carota HOM05D000200 ORTHO05D001546 9.6e-100 367.9 301 61.8
EL10Ac9g22981 Beta vulgaris HOM05D006471 ORTHO05D008157 3.6e-99 365.9 303 62.4
vmacro16923 Vaccinium macrocarpon HOM05D006471 ORTHO05D008157 6.2e-99 365.2 300 63.0
Rhsim12G0193800 Rhododendron simsii HOM05D006471 ORTHO05D008157 6.9e-98 361.7 292 64.4
Migut.L00869 Erythranthe guttata HOM05D006471 ORTHO05D008157 9.0e-98 361.3 301 63.1
Sc10g0006980 Simmondsia chinensis HOM05D006471 ORTHO05D008157 9.0e-98 361.3 339 57.5
HanXRQChr03g0076951 Helianthus annuus HOM05D006471 ORTHO05D008157 3.4e-97 359.4 289 64.0
SalBow2G1748 Salvia bowleyana HOM05D006471 ORTHO05D008157 7.6e-97 358.2 299 61.5
Aqoxy2G00030 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 6.4e-96 355.1 290 63.1
Lj3A846G60 Lonicera japonica HOM05D006471 ORTHO05D008157 6.4e-96 355.1 273 65.9
AL6G34590 Arabidopsis lyrata HOM05D006471 ORTHO05D008157 7.1e-95 351.7 299 59.9
Nn8g40194 Nelumbo nucifera HOM05D006471 ORTHO05D008157 3.5e-94 349.4 252 67.1
Aqoxy2G01235 Aquilegia oxysepala HOM05D006471 ORTHO05D008157 6.0e-94 348.6 292 62.0
Lsat_1_v5_gn_0_15460 Lactuca sativa HOM05D006471 ORTHO05D008157 6.0e-94 348.6 292 63.7
SGA_v2.0_scaffold92G28263 Striga asiatica HOM05D006471 ORTHO05D008157 7.8e-94 348.2 334 55.7
FAN17G0671 Fragaria x ananassa HOM05D006471 ORTHO05D008157 9.6e-92 341.3 260 67.3
CDE02G4670 Ceratophyllum demersum HOM05D006471 ORTHO05D008157 4.8e-91 339.0 305 57.0
SGA_v2.0_scaffold580G53041 Striga asiatica HOM05D006471 ORTHO05D004488 1.4e-90 337.4 334 55.7
CARHR190210 Cardamine hirsuta HOM05D006471 ORTHO05D008157 3.4e-89 332.8 291 59.5
ATR0665G473 Amborella trichopoda HOM05D006471 ORTHO05D008157 3.8e-88 329.3 320 57.2
ECA240G3241 Erigeron canadensis HOM05D006471 ORTHO05D008157 1.9e-87 327.0 245 66.1
FAN07G1501 Fragaria x ananassa HOM05D002605 ORTHO05D002842 5.4e-87 325.5 239 68.6
Oeu006329.1 Olea europaea HOM05D006471 ORTHO05D008157 9.3e-87 324.7 297 57.6
unitig_749.g13340 Utricularia gibba HOM05D006471 ORTHO05D008157 1.2e-86 324.3 266 60.2
QL08p056974 Quercus lobata HOM05D006471 ORTHO05D008157 3.5e-86 322.8 230 70.4
Os03g0801700 Oryza sativa ssp. japonica HOM05D006471 ORTHO05D008157 1.8e-85 320.5 296 58.4
Zm00001eb061200 Zea mays HOM05D006471 ORTHO05D008157 4.3e-84 315.8 296 58.8
Prupe.1G349200 Prunus persica HOM05D006471 ORTHO05D008157 2.1e-83 313.5 239 66.9
HPP92_017784 Vanilla planifolia HOM05D006471 ORTHO05D008157 8.1e-83 311.6 298 56.7
SGA_v2.0_scaffold42G16129 Striga asiatica HOM05D006471 ORTHO05D008157 5.3e-82 308.9 312 54.8
Cc00_g09970 Coffea canephora HOM05D006471 ORTHO05D008157 7.6e-81 305.1 224 69.6
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.1e-79 301.2 246 63.4
SEGI_40912 Sequoiadendron giganteum HOM05D006471 ORTHO05D008157 5.5e-71 272.3 287 53.0
MD13G1003200 Malus domestica HOM05D006471 ORTHO05D008157 7.1e-71 271.9 177 73.4
Pp3c5_28930 Physcomitrium patens HOM05D006471 ORTHO05D008157 4.8e-67 259.2 272 50.0
Carub.0006s2111 Capsella rubella HOM05D006471 ORTHO05D008157 6.9e-66 255.4 230 58.3
Mapoly0019s0104 Marchantia polymorpha HOM05D006471 ORTHO05D008157 2.5e-60 236.9 225 53.3
SMO141G0020 Selaginella moellendorffii HOM05D006471 ORTHO05D008157 5.7e-60 235.7 191 59.7
Pp3c14_5150 Physcomitrium patens HOM05D006471 ORTHO05D008157 9.7e-60 235.0 274 48.5
FAN12G2193 Fragaria x ananassa HOM05D006471 ORTHO05D008157 9.7e-44 181.8 139 67.6
AagrBONN_evm.TU.Sc2ySwM_362.1554 Anthoceros agrestis HOM05D006471 ORTHO05D008157 4.5e-41 172.9 162 53.1
MCO07G267 Micromonas commoda HOM05D006471 ORTHO05D008157 1.2e-38 164.9 243 41.6
Sc06g0004050 Simmondsia chinensis HOM05D006471 ORTHO05D008157 6.5e-32 142.5 144 57.6
Carub.0006s2110 Capsella rubella HOM05D006471 ORTHO05D008157 8.6e-24 115.5 109 56.0
QL08p056966 Quercus lobata HOM05D006471 ORTHO05D008157 3.6e-22 110.2 68 75.0
Cre13.g607600 Chlamydomonas reinhardtii HOM05D006471 ORTHO05D008157 4.0e-21 106.7 347 28.2
arahy.Tifrunner.gnm1.ann1.SQAN1F Arachis hypogaea HOM05D006471 ORTHO05D008157 3.1e-13 80.5 47 78.7
BolC9t53696H Brassica oleracea HOM05D006471 ORTHO05D008157 7.0e-10 69.3 83 44.6


User provided reference genes

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