Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 1.3e-120 436.4 229 100.0
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 1.1e-111 406.8 229 92.1
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 1.4e-109 399.8 231 91.3
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 2.9e-99 365.5 232 85.8
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 2.2e-94 349.4 231 82.3
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 6.3e-94 347.8 231 80.5
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 5.0e-91 338.2 231 80.5
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 1.0e-88 330.5 234 77.8
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 5.1e-88 328.2 234 77.4
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 1.4e-82 310.1 220 76.8
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 1.4e-77 293.5 227 69.2
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 1.8e-77 293.1 227 71.4
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.4e-77 292.7 226 70.4
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 3.5e-76 288.9 226 69.5
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 3.5e-76 288.9 226 68.6
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 1.0e-75 287.3 225 70.7
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 1.7e-75 286.6 226 68.6
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 6.5e-75 284.6 228 65.8
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 1.1e-74 283.9 229 68.6
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 1.4e-74 283.5 247 65.2
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 1.9e-74 283.1 226 67.7
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 5.5e-74 281.6 226 67.3
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 7.2e-74 281.2 226 68.1
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 9.4e-74 280.8 234 65.4
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 2.1e-73 279.6 226 68.1
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 2.1e-73 279.6 247 65.6
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.7e-73 279.3 226 68.1
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 2.7e-73 279.3 224 68.3
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 4.7e-73 278.5 215 69.8
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 6.1e-73 278.1 225 67.1
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 1.0e-72 277.3 251 62.5
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 6.7e-72 274.6 247 63.2
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 8.8e-72 274.2 247 62.8
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 4.4e-71 271.9 229 67.2
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 4.4e-71 271.9 229 67.2
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 5.7e-71 271.6 229 69.0
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 7.4e-71 271.2 229 66.8
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 7.4e-71 271.2 229 67.2
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 7.4e-71 271.2 230 69.1
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 1.3e-70 270.4 226 68.6
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 1.3e-70 270.4 220 68.2
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 1.3e-70 270.4 247 61.5
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.7e-70 270.0 229 66.8
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 1.7e-70 270.0 227 66.5
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 2.2e-70 269.6 228 65.8
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 2.8e-70 269.2 231 64.1
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 4.8e-70 268.5 219 68.5
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 6.3e-70 268.1 226 63.7
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 6.3e-70 268.1 229 65.9
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.4e-69 266.9 231 65.8
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.3e-69 265.0 217 69.1
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 1.6e-68 263.5 221 67.0
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 2.6e-68 262.7 227 65.6
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 2.6e-68 262.7 221 66.5
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 4.5e-68 261.9 227 63.9
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 7.7e-68 261.2 225 66.2
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 7.7e-68 261.2 238 62.2
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 1.0e-67 260.8 216 65.3
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 1.3e-67 260.4 237 62.0
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 2.2e-67 259.6 219 63.9
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 2.2e-67 259.6 244 61.1
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 3.8e-67 258.8 238 61.8
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 6.5e-67 258.1 227 62.1
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 1.1e-66 257.3 217 66.4
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 1.1e-66 257.3 217 66.4
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 1.5e-66 256.9 245 59.6
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 2.5e-66 256.1 246 59.8
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 4.2e-66 255.4 234 61.5
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 4.2e-66 255.4 229 62.9
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 4.2e-66 255.4 244 59.4
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 5.5e-66 255.0 234 61.5
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 5.5e-66 255.0 226 59.7
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 1.2e-65 253.8 215 64.7
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 1.2e-65 253.8 196 70.9
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 1.4e-64 250.4 231 62.3
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 1.4e-64 250.4 197 69.5
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 1.4e-64 250.4 215 64.2
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 2.3e-64 249.6 252 58.7
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 3.0e-64 249.2 259 57.1
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 4.0e-64 248.8 232 62.1
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 5.2e-64 248.4 259 56.8
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 8.8e-64 247.7 193 70.5
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 1.2e-63 247.3 197 68.5
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 2.6e-63 246.1 213 62.4
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 4.4e-63 245.4 210 63.3
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 5.7e-63 245.0 192 69.8
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 5.7e-63 245.0 216 62.0
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 9.7e-63 244.2 207 65.2
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 1.4e-61 240.4 175 73.7
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 7.0e-61 238.0 221 61.5
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 2.0e-60 236.5 198 66.2
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 1.0e-59 234.2 193 67.4
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 1.0e-56 224.2 199 62.3
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 3.1e-53 212.6 192 63.0
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 1.1e-50 204.1 148 69.6
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 1.1e-42 177.6 188 56.4
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 3.3e-42 176.0 232 47.4
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 4.7e-41 172.2 152 59.9
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 6.1e-41 171.8 227 46.7
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 6.1e-41 171.8 159 60.4
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 9.8e-39 164.5 224 45.5
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 1.1e-37 161.0 208 48.6
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 6.0e-36 155.2 219 46.6
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 7.8e-36 154.8 184 49.5
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 1.0e-35 154.5 152 54.6
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 6.2e-33 145.2 112 66.1
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 1.1e-32 144.4 187 44.4
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 4.1e-29 132.5 159 45.9
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 3.9e-27 125.9 101 64.4
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 1.7e-22 110.5 158 44.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 4.1e-21 105.9 116 45.7
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 1.7e-19 100.5 156 42.9
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 6.6e-19 98.6 104 53.8
CiPaw.01G076800 Carya illinoinensis HOM05D006960 ORTHO05D008699 5.6e-18 95.5 110 52.7
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 2.7e-12 76.6 215 28.8
Medtr5g015730 Medicago truncatula HOM05D006960 ORTHO05D008699 2.5e-10 70.1 40 82.5


User provided reference genes

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