Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 1.1e-87 327.4 292 100.0
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 5.2e-69 265.4 187 74.3
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.5e-63 246.5 183 84.7
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 5.6e-63 245.4 186 66.7
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 8.9e-61 238.0 181 75.7
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 4.4e-60 235.7 187 69.0
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 4.9e-59 232.3 182 69.8
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 2.1e-57 226.9 180 63.3
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 1.1e-55 221.1 186 61.3
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.5e-52 210.7 183 59.6
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 2.6e-52 209.9 187 55.6
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 3.4e-52 209.5 184 66.8
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 5.8e-52 208.8 188 55.9
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 9.9e-52 208.0 185 65.4
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 1.3e-51 207.6 168 67.9
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 7.1e-50 201.8 187 55.6
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 7.1e-50 201.8 189 66.1
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.6e-49 200.7 187 55.1
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.0e-48 198.0 180 65.6
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.3e-48 197.6 292 67.8
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 2.3e-48 196.8 180 66.1
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 2.3e-48 196.8 180 66.7
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 8.6e-48 194.9 186 64.5
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 8.6e-48 194.9 186 61.8
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 3.3e-47 193.0 186 54.8
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 4.3e-47 192.6 185 63.2
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 4.3e-47 192.6 182 63.2
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 5.6e-47 192.2 185 53.0
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 7.3e-47 191.8 180 53.9
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 9.6e-47 191.4 180 53.9
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 2.1e-46 190.3 180 62.8
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 2.8e-46 189.9 184 62.5
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 2.8e-46 189.9 180 62.8
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 3.6e-46 189.5 180 63.9
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 4.7e-46 189.1 180 53.3
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 6.2e-46 188.7 188 53.2
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 8.1e-46 188.3 180 65.0
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.4e-45 186.8 185 56.2
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 3.1e-45 186.4 180 60.6
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 5.2e-45 185.7 182 57.7
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 6.9e-45 185.3 189 49.7
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 8.9e-45 184.9 183 62.3
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 8.9e-45 184.9 178 50.6
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 1.5e-44 184.1 180 63.9
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 2.0e-44 183.7 177 52.5
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 2.0e-44 183.7 177 52.5
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 4.4e-44 182.6 177 55.4
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 1.3e-43 181.0 177 55.4
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.8e-43 179.5 183 50.3
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 4.9e-43 179.1 180 51.1
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 1.9e-42 177.2 180 55.6
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 4.2e-42 176.0 182 52.2
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 5.4e-42 175.6 188 50.0
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 9.3e-42 174.9 180 61.1
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 1.2e-41 174.5 187 56.7
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.2e-41 174.5 183 56.3
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 2.1e-41 173.7 179 62.0
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 2.7e-41 173.3 174 64.4
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 6.0e-41 172.2 172 57.6
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 7.8e-41 171.8 189 50.3
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 1.0e-40 171.4 185 61.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.3e-40 170.2 185 63.2
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 3.0e-40 169.9 187 47.6
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 3.0e-40 169.9 187 47.6
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 3.0e-40 169.9 180 54.4
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 6.6e-40 168.7 180 59.4
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 6.6e-40 168.7 188 60.6
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 1.1e-39 167.9 188 52.1
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 1.1e-39 167.9 188 57.4
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.1e-39 167.9 178 58.4
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 2.5e-39 166.8 188 56.9
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 3.3e-39 166.4 188 62.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 3.6e-38 162.9 180 48.9
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 6.2e-38 162.2 179 49.7
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 2.4e-37 160.2 180 56.1
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 3.1e-37 159.8 178 47.2
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 6.9e-37 158.7 180 55.6
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 9.0e-37 158.3 180 48.9
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.2e-36 157.9 164 59.8
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 3.4e-36 156.4 177 59.9
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 1.0e-32 144.8 183 47.5
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 6.7e-32 142.1 177 44.6
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.1e-31 141.4 183 55.7
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 3.3e-31 139.8 186 43.0
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 1.3e-30 137.9 172 48.8
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 3.7e-30 136.3 179 44.7
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 8.1e-30 135.2 126 59.5
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 2.4e-29 133.7 179 37.4
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 4.0e-29 132.9 117 53.0
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 9.0e-29 131.7 180 41.7
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 1.2e-28 131.3 117 55.6
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 2.0e-28 130.6 184 45.1
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 3.2e-26 123.2 127 51.2
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 1.8e-24 117.5 153 52.3
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 7.4e-23 112.1 186 52.2
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.1e-21 106.7 182 46.7
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 6.9e-21 105.5 121 38.8
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 3.8e-19 99.8 64 73.4
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 8.4e-19 98.6 182 44.5
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 1.3e-16 91.3 179 43.6
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 3.9e-16 89.7 89 59.6
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 3.3e-15 86.7 175 44.0
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 3.3e-15 86.7 186 34.4
BcaC04g21805 Brassica carinata HOM05D006667 ORTHO05D008387 4.5e-12 76.3 82 73.2
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 8.5e-11 72.0 121 40.5
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 2.5e-10 70.5 82 45.1
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 1.6e-09 67.8 175 42.9
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 3.6e-09 66.6 117 35.0
C09p27300 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-07 61.6 109 59.6
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 5.7e-07 59.3 90 56.7
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 5.7e-07 59.3 90 60.0
BolC6t38487H Brassica oleracea HOM05D006667 ORTHO05D008387 7.4e-07 58.9 90 66.7
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 9.7e-07 58.5 110 30.9
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 4.8e-06 56.2 137 27.7


User provided reference genes

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