Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G007700 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 7.8e-88 327.0 157 100.0
Glyma.13G192500 Glycine max HOM05D009801 ORTHO05D011967 1.0e-50 203.8 157 63.1
Glyma.09G090600 Glycine max HOM05D009801 ORTHO05D011967 2.5e-49 199.1 157 63.7
Glyma.13G192300 Glycine max HOM05D009801 ORTHO05D011967 3.2e-49 198.7 157 62.4
Glyma.03G088300 Glycine max HOM05D009801 ORTHO05D011967 2.2e-45 186.0 157 59.2
Glyma.20G242600 Glycine max HOM05D009801 ORTHO05D011967 9.1e-28 127.5 157 45.2
Lalb_Chr21g0307151 Lupinus albus HOM05D009801 ORTHO05D011967 2.3e-15 86.3 101 36.6
Lalb_Chr23g0276871 Lupinus albus HOM05D009801 ORTHO05D011967 2.3e-15 86.3 101 37.6
Phvul.004G034932 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 4.0e-15 85.5 153 33.3
Glyma.20G242700 Glycine max HOM05D009801 ORTHO05D011967 5.2e-15 85.1 151 34.4
Phvul.004G034866 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 1.5e-14 83.6 153 32.7
Glyma.20G242500 Glycine max HOM05D009801 ORTHO05D011967 2.0e-14 83.2 152 34.9
Glyma.16G075100 Glycine max HOM05D009801 ORTHO05D011967 7.5e-14 81.3 155 34.8
Phvul.007G007600 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 4.9e-13 78.6 101 40.6
Phvul.007G007500 Phaseolus vulgaris HOM05D009801 ORTHO05D011967 6.3e-13 78.2 151 37.1
arahy.Tifrunner.gnm1.ann1.URM069 Arachis hypogaea HOM05D009801 ORTHO05D011967 2.0e-11 73.2 146 28.1
TPR.G10407 Trifolium pratense HOM05D009801 ORTHO05D011967 1.3e-10 70.5 148 31.8
Psat3g162040 Pisum sativum HOM05D018373 ORTHO05D020881 8.6e-10 67.8 69 40.6
Lalb_Chr21g0307131 Lupinus albus HOM05D009801 ORTHO05D011967 1.9e-09 66.6 105 29.5
Medtr5g024615 Medicago truncatula HOM05D009801 ORTHO05D011967 5.6e-09 65.1 41 53.7
Medtr0423s0020 Medicago truncatula HOM05D018373 ORTHO05D020881 8.0e-08 61.2 70 35.7
QL04p034676 Quercus lobata HOM05D008849 ORTHO05D010556 1.4e-07 60.5 70 31.4
Medtr8g041940 Medicago truncatula HOM05D018373 ORTHO05D020881 2.3e-07 59.7 125 28.0
Medtr2g025730 Medicago truncatula HOM05D009801 ORTHO05D011967 3.0e-07 59.3 111 34.2
TPR.G26741 Trifolium pratense HOM05D018373 ORTHO05D020881 3.0e-07 59.3 66 40.9
VMungo0540G1648 Vigna mungo HOM05D009801 ORTHO05D011967 4.0e-07 58.9 140 27.9
Medtr6g007125 Medicago truncatula HOM05D018373 ORTHO05D020881 6.8e-07 58.2 39 56.4
COL.COLO4_26204 Corchorus olitorius HOM05D008849 ORTHO05D010556 1.2e-06 57.4 46 45.7
Manes.15G049200 Manihot esculenta HOM05D008849 ORTHO05D010556 1.5e-06 57.0 46 41.3
TPR.G16366 Trifolium pratense HOM05D002494 ORTHO05D002673 4.4e-06 55.5 39 48.7
Thecc.04G213000 Theobroma cacao HOM05D008849 ORTHO05D010556 7.5e-06 54.7 40 47.5


User provided reference genes

Program Settings