Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 8.8e-246 853.2 437 100.0
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 1.6e-210 736.1 438 87.2
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 5.5e-208 727.6 430 87.4
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 1.2e-149 533.9 446 67.3
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 7.1e-147 524.6 439 65.6
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 8.2e-143 511.1 445 63.1
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 6.9e-142 508.1 433 64.4
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 7.6e-141 504.6 448 63.6
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 2.5e-139 499.6 451 63.0
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 2.5e-128 463.0 424 61.1
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 9.1e-118 427.9 432 57.2
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.4e-113 414.1 433 56.6
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.2e-109 401.0 420 56.2
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 1.6e-98 364.0 431 51.0
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 2.7e-98 363.2 428 52.1
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 3.6e-98 362.8 440 50.7
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 4.0e-97 359.4 393 52.7
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 1.5e-96 357.5 445 50.6
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 3.7e-95 352.8 429 49.9
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 4.5e-93 345.9 436 49.5
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 3.3e-91 339.7 445 47.2
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 3.3e-91 339.7 445 47.2
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 3.3e-91 339.7 406 50.7
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 2.1e-90 337.0 453 48.6
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 3.6e-90 336.3 443 48.8
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 3.6e-90 336.3 440 49.1
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 4.7e-90 335.9 405 50.6
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 6.1e-90 335.5 401 50.6
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 2.3e-89 333.6 396 49.7
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 1.5e-88 330.9 401 50.1
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 2.0e-88 330.5 402 51.7
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 5.7e-88 328.9 390 51.3
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 7.5e-88 328.6 402 51.2
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 7.5e-88 328.6 375 49.9
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 9.8e-88 328.2 418 48.1
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 1.3e-87 327.8 404 49.0
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 1.7e-87 327.4 378 49.5
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 3.7e-87 326.2 434 47.5
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 4.9e-87 325.9 376 50.0
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 8.3e-87 325.1 401 49.4
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 2.4e-86 323.6 401 49.4
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 4.1e-86 322.8 435 47.4
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 7.0e-86 322.0 378 48.7
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 7.0e-86 322.0 451 44.6
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 9.2e-86 321.6 430 45.1
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.2e-85 321.2 370 50.0
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 1.3e-84 317.8 358 52.0
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 6.6e-84 315.5 429 46.4
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 3.3e-83 313.2 407 48.6
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 7.3e-83 312.0 437 45.1
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.6e-82 310.8 432 45.8
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 4.7e-82 309.3 405 47.9
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 1.4e-81 307.8 438 46.6
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 1.8e-81 307.4 407 46.2
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 6.8e-81 305.4 429 45.0
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 8.9e-81 305.1 445 45.4
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 3.4e-80 303.1 442 44.3
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 2.2e-79 300.4 337 51.9
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 3.7e-79 299.7 438 43.6
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 1.6e-77 294.3 406 45.3
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 1.7e-76 290.8 414 43.7
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 3.0e-76 290.0 359 47.9
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 7.3e-75 285.4 448 42.2
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 1.6e-74 284.3 446 42.2
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 2.1e-74 283.9 444 42.3
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 3.6e-74 283.1 353 47.6
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 1.1e-73 281.6 394 46.7
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.4e-73 281.2 394 46.4
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 1.8e-73 280.8 459 41.6
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 4.0e-73 279.6 402 44.8
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 6.8e-73 278.9 394 46.2
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 1.5e-72 277.7 353 47.6
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 7.5e-72 275.4 429 39.4
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 1.7e-71 274.2 542 38.9
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.7e-71 274.2 238 58.8
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 1.1e-70 271.6 396 43.9
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 1.9e-70 270.8 426 41.8
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 5.1e-68 262.7 373 43.4
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 1.5e-67 261.2 382 42.4
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 1.5e-67 261.2 439 39.4
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 2.1e-66 257.3 377 43.5
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 2.3e-65 253.8 441 41.7
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 4.0e-65 253.1 271 51.3
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 4.0e-65 253.1 360 42.5
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 3.4e-64 250.0 350 42.0
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 7.6e-64 248.8 342 45.6
Glyma.10G295900 Glycine max HOM05D006262 ORTHO05D007266 1.7e-63 247.7 180 76.1
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 4.1e-62 243.0 352 44.0
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 7.1e-62 242.3 502 36.1
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 3.4e-56 223.4 437 36.8
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 7.6e-56 222.2 287 49.1
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 5.6e-51 206.1 342 40.1
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 2.1e-50 204.1 285 42.8
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.2e-47 194.1 176 56.8
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 5.4e-46 189.5 167 58.1
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 3.5e-45 186.8 160 60.0
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 4.6e-45 186.4 362 39.8
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 3.0e-44 183.7 357 35.0
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 8.7e-44 182.2 349 39.8
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.5e-40 171.4 463 30.5
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.3e-39 168.3 141 63.1
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 1.1e-35 155.2 414 32.1
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.3e-31 141.7 357 30.5
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 1.7e-23 114.8 86 68.6
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 6.5e-23 112.8 285 31.9
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 1.9e-22 111.3 249 35.3
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 4.2e-22 110.2 191 38.7
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 5.5e-22 109.8 192 38.0
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.3e-20 105.1 82 63.4
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 6.3e-18 96.3 263 31.6
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 1.4e-17 95.1 83 62.7
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 1.8e-17 94.7 337 28.5
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 5.9e-16 89.7 75 62.7
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 7.9e-13 79.3 340 27.1
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 7.9e-13 79.3 237 30.8
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 5.1e-12 76.6 46 80.4
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.1e-11 75.5 51 74.5
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 7.4e-11 72.8 75 54.7
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 1.4e-09 68.6 74 54.1
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 3.8e-07 60.5 105 42.9
Glyma.11G176311 Glycine max HOM05D000774 ORTHO05D000602 8.5e-07 59.3 30 96.7
FAN07G1916 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.1e-06 58.9 52 55.8


User provided reference genes

Program Settings