Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 2.4e-273 944.9 470 100.0
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 5.1e-260 900.6 470 94.7
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 2.1e-245 852.0 471 89.6
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.0e-239 833.2 462 88.3
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 5.2e-236 820.8 469 85.3
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 6.3e-234 813.9 469 85.1
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 9.1e-233 810.1 469 82.7
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 5.5e-230 800.8 474 83.1
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 3.4e-219 765.0 460 79.3
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 8.3e-218 760.4 471 77.1
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 1.4e-217 759.6 461 79.8
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 2.7e-216 755.4 470 76.4
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 1.1e-214 750.0 461 78.3
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 1.5e-214 749.6 461 77.2
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 1.2e-213 746.5 464 77.2
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 4.7e-213 744.6 470 77.2
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 8.0e-213 743.8 463 76.5
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 8.0e-213 743.8 461 77.4
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.4e-212 743.0 463 77.1
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 4.0e-212 741.5 463 76.9
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 6.8e-212 740.7 463 77.5
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 8.9e-212 740.3 460 77.0
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 8.9e-212 740.3 460 77.0
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 1.5e-211 739.6 472 75.6
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 2.0e-211 739.2 459 76.9
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 4.4e-211 738.0 470 76.6
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 7.5e-211 737.3 470 74.0
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 2.2e-210 735.7 478 73.4
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.9e-210 735.3 458 75.3
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 6.4e-210 734.2 463 74.3
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 4.1e-209 731.5 461 74.8
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.6e-208 729.6 477 73.4
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 2.7e-208 728.8 469 74.2
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 3.5e-208 728.4 463 73.9
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 4.6e-208 728.0 466 73.8
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.9e-206 722.6 410 86.1
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 1.9e-206 722.6 410 86.1
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 2.5e-206 722.2 469 71.9
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 2.5e-206 722.2 494 71.3
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.8e-205 718.8 464 74.6
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 4.7e-205 718.0 504 69.6
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 1.4e-204 716.5 402 85.6
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 4.0e-204 714.9 467 72.4
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 6.8e-204 714.1 497 70.8
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.2e-203 713.4 464 73.7
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.1e-201 706.8 499 67.7
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 9.2e-201 703.7 499 69.7
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.2e-200 703.4 471 71.8
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.6e-200 703.0 499 67.1
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 3.5e-200 701.8 463 71.3
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.7e-199 699.5 502 66.5
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.9e-199 698.4 470 69.6
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 9.5e-198 693.7 548 64.8
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 3.1e-196 688.7 462 70.8
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.3e-191 672.5 534 63.3
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.3e-191 672.5 469 67.4
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 6.6e-191 671.0 466 70.0
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 1.8e-188 662.9 501 64.5
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 5.8e-187 657.9 463 71.3
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.2e-185 652.1 462 66.2
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 2.1e-184 649.4 462 65.8
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 2.1e-181 639.4 461 64.9
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 3.6e-181 638.6 393 78.6
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.4e-180 636.7 403 74.2
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.7e-178 629.8 463 66.7
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.9e-178 629.0 463 65.0
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 1.1e-177 627.1 378 78.3
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 1.4e-177 626.7 462 66.0
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.1e-173 612.8 463 65.4
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 6.4e-170 601.3 463 62.9
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.1e-169 600.5 417 68.1
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 3.3e-166 589.0 374 74.1
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 8.2e-165 584.3 492 61.2
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 1.1e-164 583.9 463 64.4
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 1.4e-164 583.6 365 77.8
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 6.3e-157 558.1 463 61.6
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 9.1e-148 527.7 322 77.0
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 5.9e-147 525.0 368 70.1
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 4.7e-144 515.4 333 73.0
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 2.4e-140 503.1 373 69.7
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.2e-115 421.0 268 73.1
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.3e-98 364.4 224 77.2
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 7.6e-70 268.9 166 77.7
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 2.3e-66 257.3 447 32.2
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.3e-61 241.5 152 75.0
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 7.6e-54 215.7 236 52.5
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-50 204.1 159 64.8
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.6e-43 181.4 121 66.1
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.2e-30 138.7 427 28.3
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.8e-23 114.8 393 27.0
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.7e-21 108.2 76 67.1
SEGI_36642 Sequoiadendron giganteum HOM05D007497 ORTHO05D022249 2.1e-19 101.3 397 24.4
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 2.3e-18 97.8 341 26.7
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 7.0e-15 86.3 56 75.0
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 8.5e-13 79.3 58 62.1
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 4.2e-12 77.0 521 21.7
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 8.3e-08 62.8 388 22.7
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 3.1e-07 60.8 205 29.8


User provided reference genes

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