Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 4.6e-63 245.4 239 100.0
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 5.2e-43 178.7 241 81.3
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 1.4e-35 154.1 241 80.5
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 9.9e-34 147.9 234 79.9
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 6.4e-33 145.2 193 85.0
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 1.9e-32 143.7 238 78.6
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 3.2e-32 142.9 239 75.3
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.1e-32 141.7 200 75.0
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 7.9e-31 138.3 237 62.9
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 8.7e-30 134.8 241 67.6
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 1.5e-29 134.0 201 70.1
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 2.5e-29 133.3 193 82.9
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 5.6e-29 132.1 201 77.1
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 5.6e-29 132.1 239 70.7
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 7.4e-29 131.7 240 74.2
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 7.4e-29 131.7 238 72.7
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 9.6e-29 131.3 236 73.7
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.7e-28 129.4 200 72.5
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 3.4e-26 122.9 237 67.9
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 3.4e-26 122.9 238 70.6
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.8e-26 122.1 239 69.9
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 9.9e-26 121.3 239 56.5
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 3.8e-25 119.4 242 74.8
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 8.4e-25 118.2 234 71.4
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 1.4e-24 117.5 235 71.9
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.5e-24 115.5 239 69.5
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 5.5e-24 115.5 242 66.5
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 1.2e-23 114.4 235 65.1
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 2.7e-23 113.2 235 67.2
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.0e-22 111.3 242 71.1
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 1.8e-22 110.5 234 70.1
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 2.3e-22 110.2 253 54.9
Glyma.08G186200 Glycine max HOM05D003347 ORTHO05D003821 3.0e-22 109.8 241 74.3
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.9e-22 109.4 200 69.5
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 3.9e-22 109.4 202 68.3
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 6.7e-22 108.6 230 69.1
Glyma.15G046600 Glycine max HOM05D003347 ORTHO05D003821 6.7e-22 108.6 200 77.0
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 8.7e-22 108.2 200 54.0
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.1e-21 107.8 201 73.6
Thecc.02G038200 Theobroma cacao HOM05D003347 ORTHO05D003821 1.5e-21 107.5 242 66.1
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 1.9e-21 107.1 201 54.7
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 2.5e-21 106.7 173 69.9
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.5e-21 106.7 231 66.7
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 3.3e-21 106.3 202 68.8
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 3.3e-21 106.3 240 68.8
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 4.3e-21 105.9 201 75.1
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 5.6e-21 105.5 162 85.2
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 9.6e-21 104.8 193 60.6
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.1e-20 103.6 234 60.7
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 3.7e-20 102.8 201 71.1
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 3.7e-20 102.8 202 64.4
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 4.8e-20 102.4 237 57.4
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 8.2e-20 101.7 162 77.2
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 1.8e-19 100.5 159 88.7
CiPaw.06G147300 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.1e-19 99.8 235 69.4
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 4.0e-19 99.4 260 60.8
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 5.3e-19 99.0 163 74.2
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 9.0e-19 98.2 237 53.6
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 9.0e-19 98.2 239 70.7
Cpa.g.sc113.60 Carica papaya HOM05D003347 ORTHO05D003821 1.2e-18 97.8 240 65.4
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 7.6e-18 95.1 250 61.2
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 1.0e-17 94.7 161 72.7
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.0e-17 94.7 105 59.0
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 1.3e-17 94.4 197 67.0
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 3.8e-17 92.8 172 69.2
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 6.5e-17 92.0 201 69.7
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 6.5e-17 92.0 163 68.7
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 6.5e-17 92.0 163 68.7
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 8.4e-17 91.7 235 59.1
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 8.4e-17 91.7 159 83.6
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 1.4e-16 90.9 239 58.6
FAN16G0856 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.4e-16 90.9 202 68.3
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.4e-16 90.9 233 51.1
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.4e-16 90.9 111 53.2
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.9e-16 90.5 196 56.6
RcHm_v2.0_Chr5g0049401 Rosa chinensis HOM05D003347 ORTHO05D003821 1.9e-16 90.5 202 71.3
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 7.1e-16 88.6 146 54.8
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 9.3e-16 88.2 236 60.2
Duzib248G0125 Durio zibethinus HOM05D003347 ORTHO05D003821 3.5e-15 86.3 242 68.2
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 3.5e-15 86.3 255 55.3
Potri.001G211000 Populus trichocarpa HOM05D003347 ORTHO05D003821 7.9e-15 85.1 237 68.4
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 7.9e-15 85.1 238 63.9
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 1.0e-14 84.7 192 61.5
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.0e-14 84.7 78 62.8
TWI23G0580 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.0e-14 84.7 193 72.0
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 1.8e-14 84.0 201 53.7
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 1.8e-14 84.0 159 74.2
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 3.0e-14 83.2 114 62.3
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 6.7e-14 82.0 116 51.7
Prupe.1G568600 Prunus persica HOM05D003347 ORTHO05D003821 6.7e-14 82.0 202 65.8
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 6.7e-14 82.0 133 83.5
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 8.7e-14 81.6 251 55.4
FAN21G3803 Fragaria x ananassa HOM05D003347 ORTHO05D003821 8.7e-14 81.6 202 71.3
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 8.7e-14 81.6 164 70.7
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.1e-13 81.3 151 51.0
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.9e-13 80.5 185 68.6
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.5e-13 80.1 238 62.2
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 3.3e-13 79.7 157 52.9
FvH4_3g26951 Fragaria vesca HOM05D003347 ORTHO05D003821 3.3e-13 79.7 202 70.8
FAN11G2552 Fragaria x ananassa HOM05D003347 ORTHO05D003821 3.3e-13 79.7 202 70.8
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 5.7e-13 79.0 116 58.6
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 7.4e-13 78.6 194 64.9
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 1.3e-12 77.8 74 62.2
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 1.6e-12 77.4 150 58.7
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.2e-12 77.0 182 34.6
FAN25G2408 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.2e-12 77.0 202 70.3
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.2e-12 77.0 164 47.0
COL.COLO4_17865 Corchorus olitorius HOM05D003347 ORTHO05D003821 2.8e-12 76.6 153 59.5
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 2.8e-12 76.6 195 59.5
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.1e-11 74.7 190 58.9
Eucgr.H05071 Eucalyptus grandis HOM05D003347 ORTHO05D003821 1.1e-11 74.7 195 60.5
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.4e-11 74.3 158 60.1
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 1.4e-11 74.3 160 69.4
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.8e-11 73.9 116 56.9
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.4e-11 73.6 134 76.1
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 5.3e-11 72.4 74 55.4
Sp1g09610 Schrenkiella parvula HOM05D003347 ORTHO05D003821 5.3e-11 72.4 253 59.7
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 9.0e-11 71.6 186 62.9
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.5e-10 70.9 160 55.6
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.5e-10 70.9 91 50.5
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 2.0e-10 70.5 117 57.3
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 3.4e-10 69.7 160 68.8
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 4.5e-10 69.3 69 58.0
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 4.5e-10 69.3 77 57.1
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 5.9e-10 68.9 90 64.4
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 7.7e-10 68.6 214 59.3
Sabra01G0163000 Salix brachista HOM05D003347 ORTHO05D003821 7.7e-10 68.6 163 77.3
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 7.7e-10 68.6 193 39.9
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.7e-09 67.4 71 60.6
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.2e-09 67.0 165 58.8
Aa31LG1G3970 Aethionema arabicum HOM05D003347 ORTHO05D003821 2.9e-09 66.6 134 62.7
AT1G10890 Arabidopsis thaliana HOM05D003347 ORTHO05D003821 2.9e-09 66.6 244 54.5
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.9e-09 66.6 165 57.6
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 3.8e-09 66.2 194 52.1
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 5.0e-09 65.9 193 50.3
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.1e-08 64.7 65 58.5
SalBow5G2549 Salvia bowleyana HOM05D003347 ORTHO05D003821 1.1e-08 64.7 100 60.0
Lsat_1_v5_gn_1_80721 Lactuca sativa HOM05D002427 ORTHO05D002818 1.9e-08 63.9 149 43.6
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.9e-08 63.9 78 62.8
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 2.5e-08 63.5 78 61.5
Sopen05g034850 Solanum pennellii HOM05D003347 ORTHO05D003821 2.5e-08 63.5 111 55.9
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 3.2e-08 63.2 81 53.1
vmacro19891 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 3.2e-08 63.2 235 60.4
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.2e-08 62.8 75 64.0
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 4.2e-08 62.8 106 51.9
Ciclev10002126m.g Citrus clementina HOM05D003347 ORTHO05D003821 5.5e-08 62.4 236 58.1
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 1.2e-07 61.2 84 48.8
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 2.1e-07 60.5 101 52.5
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 2.1e-07 60.5 175 47.4
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 2.7e-07 60.1 281 48.0
Gohir.D09G005500 Gossypium hirsutum HOM05D003347 ORTHO05D003821 2.7e-07 60.1 165 57.0
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 2.7e-07 60.1 98 43.9
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 6.1e-07 58.9 111 41.4
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 6.1e-07 58.9 149 48.3
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 6.1e-07 58.9 260 58.1
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 1.0e-06 58.2 235 51.5
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 1.4e-06 57.8 48 64.6
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 6.7e-06 55.5 48 60.4
Pp3c9_6610 Physcomitrium patens HOM05D003347 ORTHO05D003821 8.8e-06 55.1 249 56.6


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