Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G212700 Phaseolus vulgaris HOM05D007403 ORTHO05D009306 1.6e-42 175.6 87 100.0
Phvul.006G212950 Phaseolus vulgaris HOM05D007403 ORTHO05D009306 1.6e-42 175.6 87 100.0
VMungo0540G0348 Vigna mungo HOM05D007403 ORTHO05D009306 2.7e-37 158.3 87 89.7
Ca_02259_v3 Cicer arietinum L. HOM05D007403 ORTHO05D009306 1.6e-34 149.1 87 83.9
TPR.G15151 Trifolium pratense HOM05D007403 ORTHO05D009306 1.1e-33 146.4 87 82.8
Psat1g137240 Pisum sativum HOM05D007403 ORTHO05D009306 5.2e-33 144.1 87 81.6
Medtr2g043740 Medicago truncatula HOM05D007403 ORTHO05D009306 9.8e-32 139.8 87 79.3
GSVIVG01023003001 Vitis vinifera HOM05D007403 ORTHO05D009306 6.6e-28 127.1 83 75.9
Glyma.08G184700 Glycine max HOM05D007403 ORTHO05D009306 8.6e-28 126.7 69 88.4
Ciclev10000975m.g Citrus clementina HOM05D007403 ORTHO05D009306 3.6e-26 121.3 85 70.6
TAR381G0205 Trochodendron aralioides HOM05D007403 ORTHO05D009306 3.6e-26 121.3 83 69.9
Thecc.02G040500 Theobroma cacao HOM05D007403 ORTHO05D009306 4.7e-26 120.9 84 69.0
CSS0040815 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 1.8e-25 119.0 83 67.5
QL02p098561 Quercus lobata HOM05D007403 ORTHO05D009306 4.0e-25 117.9 84 71.4
Duzib132G0321 Durio zibethinus HOM05D007403 ORTHO05D009306 5.2e-25 117.5 84 69.0
FvH4_5g30191 Fragaria vesca HOM05D007403 ORTHO05D009306 5.2e-25 117.5 84 63.1
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 5.2e-25 117.5 84 63.1
Potri.003G021100 Populus trichocarpa HOM05D007403 ORTHO05D009306 6.8e-25 117.1 83 66.3
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 8.9e-25 116.7 84 63.1
Dinv19355 Davidia involucrata HOM05D007403 ORTHO05D009306 1.5e-24 115.9 82 67.1
RcHm_v2.0_Chr7g0224451 Rosa chinensis HOM05D007403 ORTHO05D009306 2.6e-24 115.2 84 60.7
TWI59G1473 Tripterygium wilfordii HOM05D007403 ORTHO05D009306 4.4e-24 114.4 87 63.2
FAN08G0644 Fragaria x ananassa HOM05D007403 ORTHO05D009306 7.5e-24 113.6 84 61.9
Prupe.1G562100 Prunus persica HOM05D007403 ORTHO05D009306 9.9e-24 113.2 84 61.9
Sabra03G0012400 Salix brachista HOM05D007403 ORTHO05D009306 9.9e-24 113.2 83 63.9
Lj5A250G19 Lonicera japonica HOM05D007403 ORTHO05D009306 1.3e-23 112.8 83 62.7
CANSAT11G1055 Cannabis sativa HOM05D007403 ORTHO05D009306 2.2e-23 112.1 83 63.9
Rhsim11G0131100 Rhododendron simsii HOM05D007403 ORTHO05D009306 2.2e-23 112.1 83 62.7
Gohir.D12G039900 Gossypium hirsutum HOM05D007403 ORTHO05D009306 3.7e-23 111.3 84 63.1
Gorai.008G041600 Gossypium raimondii HOM05D007403 ORTHO05D009306 3.7e-23 111.3 84 63.1
Gohir.A12G032700 Gossypium hirsutum HOM05D007403 ORTHO05D009306 4.9e-23 110.9 84 63.1
MBI04_g33335_MAGBIO Magnolia biondii HOM05D007403 ORTHO05D009306 6.4e-23 110.5 83 66.3
Hma1.2p1_0557F.1_g178360 Hydrangea macrophylla HOM05D007403 ORTHO05D009306 8.3e-23 110.2 83 63.9
vmacro01773 Vaccinium macrocarpon HOM05D007403 ORTHO05D009306 1.4e-22 109.4 83 63.9
Cpa.g.sc2.7 Carica papaya HOM05D007403 ORTHO05D009306 3.2e-22 108.2 83 61.4
FAN13G0620 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.2e-22 108.2 76 65.8
Cc02_g22320 Coffea canephora HOM05D007403 ORTHO05D009306 1.2e-21 106.3 84 59.5
MD08G1224800 Malus domestica HOM05D007403 ORTHO05D009306 1.6e-21 105.9 83 62.7
CAN.G1305.34 Capsicum annuum HOM05D007403 ORTHO05D009306 2.1e-21 105.5 83 59.0
Nitab4.5_0011920g0020 Nicotiana tabacum HOM05D007403 ORTHO05D009306 2.7e-21 105.1 83 59.0
Eucgr.G00612 Eucalyptus grandis HOM05D007403 ORTHO05D009306 3.5e-21 104.8 83 60.2
Sc06g0000290 Simmondsia chinensis HOM05D007403 ORTHO05D009306 3.5e-21 104.8 83 59.0
BraA02t08979Z Brassica rapa HOM05D007403 ORTHO05D009306 4.6e-21 104.4 83 56.6
Sp2g22680 Schrenkiella parvula HOM05D007403 ORTHO05D009306 4.6e-21 104.4 83 59.0
Sopen01g046850 Solanum pennellii HOM05D007403 ORTHO05D009306 4.6e-21 104.4 83 57.8
EL10Ac2g02449 Beta vulgaris HOM05D007403 ORTHO05D009306 6.0e-21 104.0 84 59.5
AUR62029925 Chenopodium quinoa HOM05D007403 ORTHO05D009306 6.0e-21 104.0 83 60.2
AUR62037684 Chenopodium quinoa HOM05D007403 ORTHO05D009306 6.0e-21 104.0 83 60.2
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 7.8e-21 103.6 83 55.4
Solyc01g104410.4 Solanum lycopersicum HOM05D007403 ORTHO05D009306 7.8e-21 103.6 83 57.8
PGSC0003DMG400023750 Solanum tuberosum HOM05D007403 ORTHO05D009306 7.8e-21 103.6 83 57.8
THA.LOC104798998 Tarenaya hassleriana HOM05D007403 ORTHO05D009306 7.8e-21 103.6 84 57.1
Thhalv10004004m.g Eutrema salsugineum HOM05D007403 ORTHO05D009306 1.0e-20 103.2 83 57.8
Lsat_1_v5_gn_7_77881 Lactuca sativa HOM05D007403 ORTHO05D009306 1.0e-20 103.2 86 58.1
AT5G24750 Arabidopsis thaliana HOM05D007403 ORTHO05D009306 1.7e-20 102.4 84 58.3
BcaB07g29919 Brassica carinata HOM05D007403 ORTHO05D009306 2.3e-20 102.1 83 56.6
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 2.3e-20 102.1 83 55.4
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 2.3e-20 102.1 83 57.8
BolC2t12064H Brassica oleracea HOM05D007403 ORTHO05D009306 2.3e-20 102.1 83 55.4
Peaxi162Scf00011g00136 Petunia axillaris HOM05D007403 ORTHO05D009306 2.3e-20 102.1 83 56.6
Ah.12g060250 Amaranthus hybridus HOM05D007403 ORTHO05D009306 6.6e-20 100.5 83 59.0
ATR1120G172 Amborella trichopoda HOM05D007403 ORTHO05D009306 8.6e-20 100.1 82 57.3
SGA_v2.0_scaffold1G00325 Striga asiatica HOM05D007403 ORTHO05D009306 8.6e-20 100.1 83 55.4
Ah.12g064270 Amaranthus hybridus HOM05D007403 ORTHO05D009306 1.1e-19 99.8 83 59.0
PSO210G5116 Papaver somniferum HOM05D007403 ORTHO05D009306 1.5e-19 99.4 83 59.0
Carub.0006s2260 Capsella rubella HOM05D007403 ORTHO05D009306 1.9e-19 99.0 83 54.2
AUR62024767 Chenopodium quinoa HOM05D007403 ORTHO05D009306 2.5e-19 98.6 83 57.8
AL6G36340 Arabidopsis lyrata HOM05D007403 ORTHO05D009306 3.3e-19 98.2 83 55.4
HPP92_020049 Vanilla planifolia HOM05D007403 ORTHO05D009306 3.3e-19 98.2 82 53.7
Aa31LG11G3980 Aethionema arabicum HOM05D007403 ORTHO05D009306 4.3e-19 97.8 83 54.2
CARHR188740 Cardamine hirsuta HOM05D007403 ORTHO05D009306 4.3e-19 97.8 84 56.0
DCAR_001817 Daucus carota HOM05D007403 ORTHO05D009306 5.6e-19 97.4 83 60.2
COL.COLO4_17887 Corchorus olitorius HOM05D007403 ORTHO05D009306 2.1e-18 95.5 78 61.5
Migut.B00669 Erythranthe guttata HOM05D007403 ORTHO05D009306 2.8e-18 95.1 83 57.8
SalBow5G2609 Salvia bowleyana HOM05D007403 ORTHO05D009306 2.8e-18 95.1 83 57.8
Manes.10G131400 Manihot esculenta HOM05D007403 ORTHO05D009306 3.6e-18 94.7 69 68.1
CiPaw.05G043100 Carya illinoinensis HOM05D007403 ORTHO05D009306 8.1e-18 93.6 69 68.1
unitig_27.g24942 Utricularia gibba HOM05D007403 ORTHO05D009306 3.1e-17 91.7 83 51.8
Aqoxy5G02020 Aquilegia oxysepala HOM05D007403 ORTHO05D009306 4.0e-17 91.3 83 56.6
Atru.chr6.1105 Acer truncatum HOM05D007403 ORTHO05D009306 5.8e-16 87.4 69 62.3
Nitab4.5_0006604g0010 Nicotiana tabacum HOM05D007403 ORTHO05D009306 9.9e-16 86.7 66 60.6
Lalb_Chr18g0060841 Lupinus albus HOM05D007403 ORTHO05D009306 3.0e-12 75.1 51 78.4
AagrBONN_evm.TU.Sc2ySwM_344.1532 Anthoceros agrestis HOM05D007403 ORTHO05D009306 1.3e-10 69.7 83 44.6
CSS0033747 Camellia sinensis var. sinensis HOM05D007403 ORTHO05D009306 6.2e-10 67.4 45 68.9
Pp3c9_24800 Physcomitrium patens HOM05D007403 ORTHO05D009306 2.4e-09 65.5 80 40.0
SEGI_06818 Sequoiadendron giganteum HOM05D007403 ORTHO05D009306 6.9e-09 63.9 73 47.9
CBR_g32500 Chara braunii HOM05D007403 ORTHO05D000800 3.4e-08 61.6 88 36.4


User provided reference genes

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