Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G200700 Phaseolus vulgaris HOM05D005019 ORTHO05D006625 0.0e+00 1090.5 553 100.0
VMungo0540G2473 Vigna mungo HOM05D005019 ORTHO05D006625 3.9e-291 1004.2 553 91.1
Glyma.13G255400 Glycine max HOM05D005019 ORTHO05D006625 2.3e-275 951.8 553 86.4
Glyma.15G059400 Glycine max HOM05D005019 ORTHO05D006625 1.3e-267 926.0 555 84.0
Ca_00175_v3 Cicer arietinum L. HOM05D005019 ORTHO05D006625 1.5e-247 859.4 560 78.2
Psat1g046760 Pisum sativum HOM05D005019 ORTHO05D006625 1.8e-243 845.9 561 76.6
Lj1g0019097 Lotus japonicus HOM05D005019 ORTHO05D006625 3.3e-242 841.6 558 79.0
Medtr2g009800 Medicago truncatula HOM05D005019 ORTHO05D006625 3.7e-241 838.2 560 76.6
Medtr2g101620 Medicago truncatula HOM05D005019 ORTHO05D006625 2.4e-240 835.5 560 76.4
Lalb_Chr19g0134621 Lupinus albus HOM05D005019 ORTHO05D006625 3.2e-237 825.1 559 77.3
Psat1g214520 Pisum sativum HOM05D005019 ORTHO05D006625 7.2e-237 823.9 563 75.5
arahy.Tifrunner.gnm1.ann1.TZR8AU Arachis hypogaea HOM05D005019 ORTHO05D006625 5.2e-235 817.8 560 75.0
Lalb_Chr03g0030271 Lupinus albus HOM05D005019 ORTHO05D006625 3.1e-232 808.5 561 75.4
TPR.G9511 Trifolium pratense HOM05D005019 ORTHO05D006625 2.9e-230 802.0 563 73.9
Cfa002330 Carpinus fangiana HOM05D005019 ORTHO05D006625 2.0e-223 779.2 571 70.8
GSVIVG01000726001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.7e-222 776.2 568 71.1
Dinv22477 Davidia involucrata HOM05D005019 ORTHO05D006625 3.8e-222 775.0 571 69.9
Prupe.5G054300 Prunus persica HOM05D005019 ORTHO05D006625 1.1e-221 773.5 574 69.9
Prupe.8G231800 Prunus persica HOM05D005019 ORTHO05D006625 5.5e-221 771.2 574 69.7
Dinv34572 Davidia involucrata HOM05D005019 ORTHO05D006625 9.4e-221 770.4 573 69.1
TWI31G0602 Tripterygium wilfordii HOM05D005019 ORTHO05D006625 3.0e-219 765.4 571 70.4
Actinidia21157 Actinidia chinensis HOM05D005019 ORTHO05D006625 4.0e-219 765.0 573 68.8
RcHm_v2.0_Chr6g0289431 Rosa chinensis HOM05D005019 ORTHO05D006625 5.7e-218 761.1 574 69.0
FAN20G1740 Fragaria x ananassa HOM05D005019 ORTHO05D006625 6.3e-217 757.7 574 69.0
CiPaw.03G257900 Carya illinoinensis HOM05D005019 ORTHO05D006625 1.1e-216 756.9 571 68.8
ClCG02G012250 Citrullus lanatus HOM05D005019 ORTHO05D006625 1.1e-216 756.9 574 68.8
FAN18G2643 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.8e-216 756.1 573 68.8
Ciclev10019516m.g Citrus clementina HOM05D005019 ORTHO05D006625 3.1e-216 755.4 569 68.7
FAN27G0650 Fragaria x ananassa HOM05D005019 ORTHO05D006625 4.1e-216 755.0 574 68.6
MELO3C020849.2 Cucumis melo HOM05D005019 ORTHO05D006625 1.2e-215 753.4 574 68.3
FvH4_5g20520 Fragaria vesca HOM05D005019 ORTHO05D006625 1.6e-215 753.1 573 68.8
CsaV3_2G016400 Cucumis sativus L. HOM05D005019 ORTHO05D006625 2.0e-215 752.7 572 68.0
Manes.16G024300 Manihot esculenta HOM05D005019 ORTHO05D006625 4.5e-215 751.5 572 68.9
Potri.005G218600 Populus trichocarpa HOM05D005019 ORTHO05D006625 7.7e-215 750.7 538 70.1
Haze_24536 Corylus avellana HOM05D005019 ORTHO05D006625 5.0e-214 748.0 552 70.3
Eucgr.K03309 Eucalyptus grandis HOM05D005019 ORTHO05D006625 1.1e-213 746.9 576 68.4
PGR044G0331 Punica granatum HOM05D005019 ORTHO05D006625 1.1e-213 746.9 577 68.8
Sc04g0003030 Simmondsia chinensis HOM05D005019 ORTHO05D006625 1.9e-213 746.1 572 66.8
Gohir.D11G348100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 5.5e-213 744.6 569 67.3
Lj1C59T1 Lonicera japonica HOM05D005019 ORTHO05D006625 7.2e-213 744.2 572 68.0
Cc02_g22310 Coffea canephora HOM05D005019 ORTHO05D006625 1.2e-212 743.4 570 66.8
FAN24G1214 Fragaria x ananassa HOM05D005019 ORTHO05D006625 2.1e-212 742.7 571 67.8
MD10G1192400 Malus domestica HOM05D005019 ORTHO05D006625 2.8e-212 742.3 578 67.3
Gorai.007G378500 Gossypium raimondii HOM05D005019 ORTHO05D006625 3.6e-212 741.9 569 67.3
FvH4_2g22480 Fragaria vesca HOM05D005019 ORTHO05D006625 6.1e-212 741.1 564 68.1
Gohir.A11G329100 Gossypium hirsutum HOM05D005019 ORTHO05D006625 1.0e-211 740.3 569 66.8
FAN04G2884 Fragaria x ananassa HOM05D005019 ORTHO05D006625 1.8e-211 739.6 570 67.5
Sed0015889 Sechium edule HOM05D005019 ORTHO05D006625 3.0e-211 738.8 574 67.2
Migut.N02183 Erythranthe guttata HOM05D005019 ORTHO05D006625 4.0e-211 738.4 575 66.3
Lj6g0023367 Lotus japonicus HOM05D005019 ORTHO05D006625 1.5e-210 736.5 562 71.5
Thecc.01G159500 Theobroma cacao HOM05D005019 ORTHO05D006625 2.6e-210 735.7 569 66.8
Lj1P543T22 Lonicera japonica HOM05D005019 ORTHO05D006625 3.4e-210 735.3 502 73.7
FAN15G0975 Fragaria x ananassa HOM05D005019 ORTHO05D006625 4.4e-210 734.9 571 67.6
Duzib147G1145 Durio zibethinus HOM05D005019 ORTHO05D006625 9.8e-210 733.8 570 66.7
Rhsim07G0080400 Rhododendron simsii HOM05D005019 ORTHO05D006625 9.8e-210 733.8 574 67.4
Gohir.D04G014300 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.2e-209 732.6 570 66.1
MD05G1205400 Malus domestica HOM05D005019 ORTHO05D006625 2.2e-209 732.6 576 66.8
TAR633G0331 Trochodendron aralioides HOM05D005019 ORTHO05D006625 2.2e-209 732.6 567 68.3
Gorai.012G016900 Gossypium raimondii HOM05D005019 ORTHO05D006625 2.8e-209 732.3 570 66.3
CANSAT35G0193 Cannabis sativa HOM05D005019 ORTHO05D006625 6.3e-209 731.1 573 66.8
Cpa.g.sc200.5 Carica papaya HOM05D005019 ORTHO05D006625 7.0e-208 727.6 571 67.6
Sabra05G0167700 Salix brachista HOM05D005019 ORTHO05D006625 1.6e-207 726.5 577 65.2
ClCG07G000610 Citrullus lanatus HOM05D005019 ORTHO05D006625 2.0e-207 726.1 556 67.8
DCAR_002684 Daucus carota HOM05D005019 ORTHO05D006625 1.0e-206 723.8 567 66.5
Nn7g37931 Nelumbo nucifera HOM05D005019 ORTHO05D006625 5.6e-205 718.0 558 66.5
Atru.chr5.1578 Acer truncatum HOM05D005019 ORTHO05D006625 2.3e-203 712.6 570 65.3
PGSC0003DMG400023686 Solanum tuberosum HOM05D005019 ORTHO05D006625 3.1e-203 712.2 559 65.7
Ah.02g113910 Amaranthus hybridus HOM05D005019 ORTHO05D006625 4.4e-202 708.4 577 63.1
AUR62037688 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.8e-202 708.0 556 66.4
Nitab4.5_0008299g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.1e-200 703.7 556 66.5
AUR62008493 Chenopodium quinoa HOM05D005019 ORTHO05D006625 5.4e-200 701.4 554 65.9
EL10Ac5g11096 Beta vulgaris HOM05D005019 ORTHO05D006625 4.6e-199 698.4 543 65.4
SalBow3G3235 Salvia bowleyana HOM05D005019 ORTHO05D006625 7.8e-199 697.6 578 62.5
Nitab4.5_0003006g0020 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.3e-198 696.8 556 66.2
ECA247G2036 Erigeron canadensis HOM05D005019 ORTHO05D006625 1.7e-198 696.4 568 65.3
HanXRQChr14g0454081 Helianthus annuus HOM05D005019 ORTHO05D006625 1.7e-198 696.4 566 64.3
Nitab4.5_0010414g0010 Nicotiana tabacum HOM05D005019 ORTHO05D006625 3.0e-198 695.7 556 66.2
Oeu018172.1 Olea europaea HOM05D005019 ORTHO05D006625 3.9e-198 695.3 579 63.0
Peaxi162Scf00045g00177 Petunia axillaris HOM05D005019 ORTHO05D006625 1.1e-197 693.7 565 64.6
MSTRG.12540 Avicennia marina HOM05D005019 ORTHO05D006625 1.5e-197 693.3 575 62.3
Solyc10g080180.3 Solanum lycopersicum HOM05D005019 ORTHO05D006625 5.6e-197 691.4 505 68.7
Sopen10g030790 Solanum pennellii HOM05D005019 ORTHO05D006625 7.3e-197 691.0 559 64.2
Nitab4.5_0001370g0040 Nicotiana tabacum HOM05D005019 ORTHO05D006625 1.6e-196 689.9 505 69.7
PSO210G0391 Papaver somniferum HOM05D005019 ORTHO05D006625 8.0e-196 687.6 569 63.6
Gohir.A05G401500 Gossypium hirsutum HOM05D005019 ORTHO05D006625 2.3e-195 686.0 570 63.3
SalBow6G4122 Salvia bowleyana HOM05D005019 ORTHO05D006625 1.2e-194 683.7 555 63.6
GSVIVG01003806001 Vitis vinifera HOM05D005019 ORTHO05D006625 1.5e-194 683.3 569 63.1
SGA_v2.0_scaffold80G25914 Striga asiatica HOM05D005019 ORTHO05D006625 2.0e-194 682.9 516 67.1
PSO210G5187 Papaver somniferum HOM05D005019 ORTHO05D006625 5.8e-194 681.4 569 63.4
Lsat_1_v5_gn_9_9921 Lactuca sativa HOM05D005019 ORTHO05D006625 8.3e-193 677.6 567 63.0
Aa31LG11G14850 Aethionema arabicum HOM05D005019 ORTHO05D006625 4.1e-192 675.2 565 63.2
Carub.0006s1224 Capsella rubella HOM05D005019 ORTHO05D006625 2.1e-191 672.9 565 61.8
Lsat_1_v5_gn_8_3120 Lactuca sativa HOM05D005019 ORTHO05D006625 2.1e-191 672.9 565 62.7
AUR62021601 Chenopodium quinoa HOM05D005019 ORTHO05D006625 3.5e-191 672.2 553 63.3
RcHm_v2.0_Chr7g0205871 Rosa chinensis HOM05D005019 ORTHO05D006625 3.5e-191 672.2 429 75.8
CSS0021329 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 1.3e-190 670.2 573 63.7
Thhalv10013183m.g Eutrema salsugineum HOM05D005019 ORTHO05D006625 5.1e-190 668.3 559 63.3
THA.LOC104806394 Tarenaya hassleriana HOM05D005019 ORTHO05D006625 5.1e-190 668.3 561 62.7
Sp6g29950 Schrenkiella parvula HOM05D005019 ORTHO05D006625 6.6e-190 667.9 554 63.4
AT5G14050 Arabidopsis thaliana HOM05D005019 ORTHO05D006625 1.1e-189 667.2 551 63.5
vmacro14869 Vaccinium macrocarpon HOM05D005019 ORTHO05D006625 2.5e-189 666.0 562 63.2
ATR0564G197 Amborella trichopoda HOM05D005019 ORTHO05D006625 1.5e-186 656.8 575 59.0
CARHR199310 Cardamine hirsuta HOM05D005019 ORTHO05D006625 1.5e-186 656.8 563 63.2
Aqoxy6G01670 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 9.9e-186 654.1 587 59.6
MBI12_g17287_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 2.2e-185 652.9 572 61.9
AL6G24710 Arabidopsis lyrata HOM05D005019 ORTHO05D006625 2.9e-185 652.5 558 62.2
HPP92_026109 Vanilla planifolia HOM05D005019 ORTHO05D006625 2.4e-184 649.4 569 60.1
Aqoxy5G00344 Aquilegia oxysepala HOM05D005019 ORTHO05D006625 9.2e-184 647.5 586 59.6
Hund02608 Selenicereus undatus HOM05D005019 ORTHO05D006625 2.7e-183 646.0 549 62.5
AUR62025557 Chenopodium quinoa HOM05D005019 ORTHO05D006625 7.8e-183 644.4 540 62.6
SHI13722 Sapria himalayana HOM05D005019 ORTHO05D006625 2.7e-175 619.4 513 62.4
Zm00001eb227850 Zea mays HOM05D005019 ORTHO05D006625 3.9e-174 615.5 575 57.4
Os07g0603200 Oryza sativa ssp. japonica HOM05D005019 ORTHO05D006625 1.3e-172 610.5 503 62.4
Thecc.05G016300 Theobroma cacao HOM05D005019 ORTHO05D006625 1.1e-171 607.4 421 71.0
unitig_8.g4702 Utricularia gibba HOM05D005019 ORTHO05D006625 1.4e-168 597.0 560 56.1
SEGI_19346 Sequoiadendron giganteum HOM05D005019 ORTHO05D006625 5.1e-166 588.6 526 58.4
Hma1.2p1_1029F.1_g249600 Hydrangea macrophylla HOM05D005019 ORTHO05D006625 3.8e-161 572.4 351 77.5
HPP92_022900 Vanilla planifolia HOM05D005019 ORTHO05D006625 1.1e-157 560.8 382 70.7
CDE04G3201 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 4.3e-157 558.9 454 60.8
Ciclev10006829m.g Citrus clementina HOM05D005019 ORTHO05D006625 5.6e-157 558.5 508 61.4
AagrBONN_evm.TU.Sc2ySwM_362.2571 Anthoceros agrestis HOM05D005019 ORTHO05D006625 2.0e-138 496.9 529 50.3
Mapoly0051s0055 Marchantia polymorpha HOM05D005019 ORTHO05D006625 3.4e-138 496.1 519 49.1
CDE02G2819 Ceratophyllum demersum HOM05D005019 ORTHO05D006625 6.1e-135 485.3 480 57.5
SMO356G0724 Selaginella moellendorffii HOM05D005019 ORTHO05D006625 3.6e-127 459.5 532 46.1
CBR_g21842 Chara braunii HOM05D005019 ORTHO05D006625 7.0e-123 445.3 534 43.6
Rhsim01G0269300 Rhododendron simsii HOM05D005019 ORTHO05D006625 7.2e-120 435.3 258 78.3
QL02p075842 Quercus lobata HOM05D005019 ORTHO05D006625 9.4e-120 434.9 556 47.1
Pp3c26_4890 Physcomitrium patens HOM05D005019 ORTHO05D006625 6.3e-116 422.2 440 49.3
Actinidia24938 Actinidia chinensis HOM05D005019 ORTHO05D006625 5.4e-107 392.5 467 51.4
AUR62008687 Chenopodium quinoa HOM05D005019 ORTHO05D006625 2.1e-103 380.6 519 45.1
CSS0011909 Camellia sinensis var. sinensis HOM05D005019 ORTHO05D006625 7.3e-96 355.5 505 44.0
Cre06.g255950 Chlamydomonas reinhardtii HOM05D005019 ORTHO05D006625 9.2e-91 338.6 473 41.0
MBI17_g40264_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D006625 7.8e-90 335.5 319 58.6
AagrBONN_evm.TU.Sc2ySwM_228.5554 Anthoceros agrestis HOM05D005019 ORTHO05D006625 1.1e-88 331.6 318 52.8
MBI17_g13392_MAGBIO Magnolia biondii HOM05D005019 ORTHO05D012924 2.1e-79 300.8 377 47.5
MCO01G264 Micromonas commoda HOM05D005019 ORTHO05D006625 6.4e-76 289.3 408 39.7
PRCOL_00000196 Prasinoderma coloniale HOM05D005019 ORTHO05D006625 3.6e-71 273.5 326 42.0
BcaNung06034 Brassica carinata HOM05D005019 ORTHO05D006625 2.7e-66 257.3 268 55.2
TAR383G0651 Trochodendron aralioides HOM05D005019 ORTHO05D006625 5.1e-57 226.5 577 33.4
BcaB01g06348 Brassica carinata HOM05D005019 ORTHO05D006625 1.1e-40 172.2 239 43.5
Cfa024923 Carpinus fangiana HOM05D005019 ORTHO05D126389 1.4e-35 155.2 539 23.9
MD05G1205300 Malus domestica HOM05D005019 ORTHO05D048639 3.4e-29 134.0 156 50.6
QL02p076237 Quercus lobata HOM05D005019 ORTHO05D006625 3.6e-18 97.4 92 62.0
Zm00001eb227870 Zea mays HOM05D005019 ORTHO05D048639 6.5e-12 76.6 80 53.8
Lj4g0005599 Lotus japonicus HOM05D000453 ORTHO05D000387 1.4e-06 58.9 284 24.6


User provided reference genes

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