Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 4.6e-238 827.4 392 100.0
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 9.3e-223 776.5 392 92.9
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 1.5e-217 759.2 392 90.6
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.6e-206 722.6 390 85.6
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 2.9e-200 701.8 399 83.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 1.5e-196 689.5 402 80.6
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 6.3e-195 684.1 415 77.8
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 6.5e-192 674.1 387 80.4
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 3.0e-189 665.2 374 83.4
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 3.7e-187 658.3 392 79.1
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.8e-187 657.9 392 79.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.1e-186 656.8 362 83.1
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 9.1e-186 653.7 391 78.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.0e-184 650.2 391 78.5
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 2.2e-184 649.0 390 77.7
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 6.5e-184 647.5 354 82.8
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 8.5e-184 647.1 398 77.1
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 8.5e-184 647.1 383 79.9
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 8.5e-184 647.1 396 77.3
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.1e-183 646.7 351 84.3
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.5e-183 646.4 391 77.5
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.5e-183 646.4 389 77.4
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 1.5e-183 646.4 392 78.8
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.9e-183 646.0 389 77.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.2e-183 645.2 387 77.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 1.2e-182 643.3 355 83.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 2.7e-182 642.1 330 87.9
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 4.7e-182 641.3 348 83.9
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 6.1e-182 641.0 396 76.8
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-180 636.7 386 78.0
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.2e-180 636.7 391 77.0
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.5e-180 636.3 351 82.9
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 3.4e-180 635.2 363 79.1
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 7.5e-180 634.0 378 79.1
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.3e-179 633.3 381 78.2
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 1.7e-179 632.9 394 76.4
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 8.3e-179 630.6 327 87.5
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 1.8e-178 629.4 346 82.9
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 4.1e-178 628.2 351 82.9
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 4.1e-178 628.2 377 78.0
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.6e-177 626.3 327 87.5
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 2.7e-177 625.5 390 75.9
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 3.5e-177 625.2 415 74.2
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.9e-177 624.4 388 76.8
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.0e-176 623.6 388 76.3
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 1.3e-176 623.2 389 74.6
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 2.9e-176 622.1 341 82.7
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 3.8e-176 621.7 372 78.0
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 3.3e-175 618.6 388 75.8
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.6e-174 616.3 378 76.2
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 8.0e-174 614.0 334 83.2
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.0e-174 614.0 327 84.7
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.0e-173 613.6 370 77.8
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 2.3e-173 612.5 335 82.1
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 3.0e-173 612.1 317 86.1
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 3.0e-173 612.1 370 77.6
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 5.7e-172 607.8 372 77.7
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 9.8e-172 607.1 331 82.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.3e-171 606.7 393 73.0
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.9e-171 605.5 411 71.8
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-170 603.6 323 83.3
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-170 603.6 387 72.6
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 2.4e-170 602.4 319 84.6
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 2.4e-170 602.4 315 85.1
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 2.4e-170 602.4 390 73.6
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 3.2e-170 602.1 360 76.7
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 5.4e-170 601.3 409 70.7
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 7.0e-170 600.9 334 81.4
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.2e-169 600.1 381 73.8
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.0e-169 599.4 315 85.7
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.0e-169 599.4 315 85.7
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 3.5e-169 598.6 315 85.1
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 5.9e-169 597.8 315 85.1
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 5.9e-169 597.8 351 78.1
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.7e-168 596.3 394 73.4
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 1.5e-167 593.2 357 78.2
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.6e-166 589.7 378 73.0
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 3.6e-166 588.6 315 83.2
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 3.6e-166 588.6 332 80.4
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 8.0e-166 587.4 316 84.2
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 4.0e-165 585.1 424 68.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.5e-164 583.2 344 77.9
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 2.9e-163 578.9 395 69.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.7e-160 569.7 370 74.1
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 3.0e-160 568.9 326 78.5
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 6.8e-157 557.8 350 72.6
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 3.7e-155 552.0 383 68.7
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.4e-154 550.1 297 81.8
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 3.9e-152 542.0 285 83.2
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.4e-148 528.9 331 73.7
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 6.4e-147 524.6 638 48.0
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.9e-146 523.1 284 82.4
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-144 516.9 311 73.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 6.6e-144 514.6 324 69.8
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.1e-143 513.8 316 71.2
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.3e-143 511.9 316 71.8
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 1.8e-128 463.4 315 65.7
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.1e-122 444.1 245 80.8
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 9.0e-109 397.9 267 70.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.3e-107 394.0 238 76.9
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 2.5e-103 379.8 284 64.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 9.1e-101 371.3 227 76.7
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 5.3e-93 345.5 351 47.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 5.0e-83 312.4 351 43.0
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 8.5e-83 311.6 310 46.8
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.1e-82 311.2 311 46.9
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.2e-74 282.7 166 78.3
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.0e-60 237.3 191 61.3
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 6.6e-59 232.3 183 59.6
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.2e-57 228.0 126 79.4
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.8e-56 224.2 331 40.5
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 3.3e-50 203.4 129 72.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 4.7e-49 199.5 204 52.5
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 2.6e-47 193.7 196 46.9
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.5e-34 150.6 85 77.6
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-23 115.2 61 82.0
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 5.3e-16 89.7 79 51.9
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 2.4e-13 80.9 39 84.6
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 4.6e-12 76.6 62 58.1
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 8.1e-09 65.9 34 76.5
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 2.4e-08 64.3 116 31.9
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.0e-07 61.2 32 75.0
VMungo0251G1525 Vigna mungo HOM05D000363 ORTHO05D000236 4.5e-07 60.1 122 29.5
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 9.9e-07 58.9 147 25.2
Glyma.13G182100 Glycine max HOM05D000363 ORTHO05D000236 1.7e-06 58.2 122 32.0
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 2.2e-06 57.8 100 32.0
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 4.9e-06 56.6 100 30.0
FAN16G1656 Fragaria x ananassa HOM05D000363 ORTHO05D000236 6.4e-06 56.2 100 32.0
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 6.4e-06 56.2 68 44.1


User provided reference genes

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