Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.0e-152 540.8 272 100.0
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.0e-131 472.6 272 86.4
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.8e-122 441.8 278 80.6
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 4.2e-121 438.3 278 79.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 3.4e-78 295.8 272 61.4
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 5.7e-78 295.0 277 58.8
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 5.4e-76 288.5 265 60.0
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 9.1e-76 287.7 275 62.2
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.2e-75 287.3 267 60.7
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 2.7e-75 286.2 283 58.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.6e-72 276.9 279 60.6
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 3.6e-72 275.8 291 56.4
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.4e-60 237.3 234 59.0
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 2.7e-59 233.0 280 51.4
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 7.3e-57 224.9 277 52.3
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 2.0e-54 216.9 265 53.6
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.5e-49 200.7 309 45.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 6.2e-48 195.3 297 45.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 6.8e-47 191.8 234 50.0
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 2.0e-46 190.3 285 45.6
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.0e-46 190.3 270 47.8
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 9.8e-46 188.0 300 42.7
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.1e-44 184.5 281 43.1
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.4e-44 184.1 271 46.5
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.4e-44 184.1 283 45.2
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.6e-43 180.6 281 45.6
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.6e-43 180.6 281 45.6
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 3.5e-43 179.5 270 46.3
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 3.9e-42 176.0 268 45.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.5e-41 174.1 256 47.3
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 5.6e-41 172.2 266 42.9
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 7.3e-41 171.8 266 45.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.1e-40 168.3 260 43.8
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.3e-39 166.8 244 47.5
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 6.8e-39 165.2 260 46.9
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 8.9e-39 164.9 266 42.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.9e-39 164.9 266 42.5
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 5.8e-38 162.2 252 44.4
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 9.9e-38 161.4 273 41.8
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 1.7e-37 160.6 274 44.2
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.2e-37 160.2 262 43.9
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.4e-36 155.6 260 45.8
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.7e-35 153.3 241 46.1
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 2.7e-35 153.3 291 40.2
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.7e-35 153.3 260 44.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 4.6e-35 152.5 267 41.6
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.0e-34 149.8 221 47.5
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 3.0e-34 149.8 249 44.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 8.6e-34 148.3 265 41.5
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 1.5e-33 147.5 236 46.6
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.5e-33 147.5 243 45.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.5e-33 146.7 285 40.4
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 4.3e-33 146.0 236 44.1
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 3.6e-32 142.9 256 43.0
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.4e-31 140.2 245 42.4
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.4e-31 140.2 254 41.3
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.4e-31 140.2 254 40.9
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 3.1e-31 139.8 261 42.1
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.2e-30 137.9 254 40.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 4.4e-30 136.0 282 35.8
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 9.9e-30 134.8 262 39.7
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 2.2e-29 133.7 208 45.7
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 8.4e-29 131.7 251 41.8
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 4.2e-28 129.4 250 38.4
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.1e-27 127.1 249 40.2
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.7e-27 126.7 261 39.1
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.7e-27 126.7 242 40.9
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 4.6e-27 125.9 272 38.6
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 6.0e-27 125.6 246 40.2
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 1.3e-26 124.4 237 41.4
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 1.7e-26 124.0 342 33.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 3.0e-26 123.2 242 40.5
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 8.7e-26 121.7 247 41.7
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 2.1e-24 117.1 263 36.1
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 2.8e-24 116.7 261 37.2
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 3.6e-24 116.3 264 35.6
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 3.6e-24 116.3 288 35.8
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 4.8e-24 115.9 234 38.9
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 4.8e-24 115.9 132 50.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 6.2e-24 115.5 263 39.5
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.4e-23 113.6 261 36.4
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.3e-23 112.5 265 37.7
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.2e-22 111.3 254 38.2
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 5.8e-22 109.0 254 39.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 9.9e-22 108.2 270 37.4
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 1.3e-21 107.8 253 38.7
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.3e-21 107.8 224 40.2
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 8.4e-21 105.1 260 39.6
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 8.4e-21 105.1 114 52.6
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.4e-20 104.4 342 31.9
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-20 104.0 228 37.3
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 2.4e-20 103.6 260 38.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 3.2e-20 103.2 256 35.5
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.5e-19 99.8 247 35.2
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.3e-18 97.1 264 34.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.3e-18 97.1 185 42.2
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.0e-18 96.7 264 34.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.5e-17 94.4 247 37.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 2.5e-17 93.6 139 41.7
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 5.6e-17 92.4 254 35.8
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 2.1e-16 90.5 255 34.9
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.1e-16 90.5 249 38.6
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.1e-16 90.5 249 38.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.4e-15 87.8 309 32.0
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 3.1e-15 86.7 262 33.6
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 3.1e-15 86.7 263 31.9
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 3.1e-15 86.7 270 34.8
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 4.0e-15 86.3 120 42.5
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 5.3e-15 85.9 127 41.7
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 9.0e-15 85.1 204 34.3
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.8e-13 79.7 137 43.1
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 1.9e-12 77.4 253 30.8
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 7.1e-12 75.5 261 33.0
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 3.5e-11 73.2 79 48.1
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.0e-10 71.6 147 41.5
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 2.4e-07 60.5 131 39.7
Ah.14g088910 Amaranthus hybridus HOM05D000873 ORTHO05D001654 9.0e-07 58.5 130 39.2
Nitab4.5_0001007g0050 Nicotiana tabacum HOM05D006486 ORTHO05D007888 7.6e-06 55.5 227 28.2


User provided reference genes

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