Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 0.0e+00 1274.2 661 100.0
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 7.6e-302 1040.0 713 78.5
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 3.2e-260 901.7 717 68.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 6.2e-211 738.0 713 56.9
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 4.2e-175 619.0 701 49.6
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 7.4e-172 608.2 691 50.8
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.9e-168 596.3 715 48.8
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 1.9e-167 593.6 715 49.4
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 9.4e-167 591.3 723 48.1
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 1.2e-166 590.9 500 62.4
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 9.7e-164 581.3 703 48.9
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 2.2e-163 580.1 732 49.0
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 2.6e-161 573.2 718 48.5
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 7.7e-161 571.6 593 53.3
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 1.0e-160 571.2 504 60.3
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.3e-160 570.9 741 46.8
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 2.7e-158 563.1 447 64.2
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 2.7e-158 563.1 717 47.6
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.4e-157 560.8 581 53.7
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 1.8e-157 560.5 722 47.1
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 5.2e-157 558.9 715 47.7
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.1e-156 557.8 568 53.0
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 6.3e-155 552.0 545 55.2
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 9.1e-154 548.1 447 61.5
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.6e-153 547.4 632 49.4
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 1.0e-152 544.7 582 52.6
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 6.5e-152 542.0 717 46.9
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.9e-151 540.4 431 61.7
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 3.2e-151 539.7 466 58.8
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 4.7e-150 535.8 725 44.8
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 8.0e-150 535.0 442 61.8
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 8.0e-150 535.0 507 55.8
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 1.0e-149 534.6 602 50.8
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 2.3e-149 533.5 730 45.9
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 4.0e-149 532.7 483 58.8
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 5.2e-149 532.3 462 58.9
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.2e-148 531.2 670 46.7
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 5.7e-148 528.9 552 54.3
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 2.8e-147 526.6 714 46.1
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.4e-146 524.2 492 55.3
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.8e-146 523.9 695 46.8
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 3.1e-146 523.1 608 49.7
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 4.1e-146 522.7 661 47.4
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 5.4e-146 522.3 571 50.4
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 7.0e-146 521.9 492 55.1
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 4.5e-145 519.2 488 56.1
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.7e-144 517.3 497 55.3
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 5.5e-143 512.3 452 59.1
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 5.5e-143 512.3 521 54.7
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 1.6e-142 510.8 655 46.0
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 6.8e-141 505.4 463 57.7
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 2.0e-140 503.8 648 46.8
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 1.3e-139 501.1 531 52.5
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 2.8e-139 500.0 555 49.9
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 2.8e-139 500.0 597 48.2
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.7e-139 499.6 601 47.9
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 8.3e-139 498.4 455 57.4
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 8.3e-139 498.4 571 49.4
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 1.7e-136 490.7 415 59.5
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 6.6e-136 488.8 487 54.4
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.1e-135 488.0 547 49.0
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 1.9e-135 487.3 460 55.2
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 1.8e-133 480.7 421 57.7
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 3.4e-132 476.5 594 48.8
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.7e-128 464.2 417 55.6
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 7.5e-124 448.7 496 51.2
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 2.5e-119 433.7 613 45.0
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 1.6e-105 387.9 421 51.8
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 6.6e-104 382.5 371 53.6
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 1.9e-103 380.9 483 46.0
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 3.5e-97 360.1 470 42.8
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 6.6e-96 355.9 251 69.3
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 4.0e-93 346.7 288 63.5
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 1.4e-90 338.2 514 43.8
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 3.5e-89 333.6 268 62.7
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.7e-80 302.8 468 42.9
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 9.6e-71 272.3 294 52.7
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 2.2e-67 261.2 243 58.0
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 3.9e-64 250.4 356 41.6
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 8.8e-48 196.1 153 69.9
Glyma.13G246400 Glycine max HOM05D007621 ORTHO05D009631 6.3e-46 189.9 200 64.5
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 1.1e-37 162.5 187 50.3
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 2.2e-35 154.8 146 52.7
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 1.3e-27 129.0 78 73.1
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 4.2e-26 124.0 506 25.5
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 8.8e-24 116.3 277 35.0
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 1.0e-19 102.8 126 47.6
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 5.6e-18 97.1 120 46.7
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 1.8e-16 92.0 87 54.0
Lalb_Chr20g0122291 Lupinus albus HOM05D007621 ORTHO05D009631 2.0e-15 88.6 112 50.9
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 5.0e-11 73.9 91 50.5
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.1e-10 72.8 57 59.6
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 3.6e-09 67.8 165 28.5
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 3.7e-06 57.8 71 46.5


User provided reference genes

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