Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 7.1e-132 474.2 279 100.0
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 2.4e-100 369.4 281 79.0
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 4.7e-67 258.8 299 58.5
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 4.7e-67 258.8 286 64.0
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 8.6e-45 184.9 300 52.7
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 8.6e-45 184.9 300 52.7
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 2.2e-40 170.2 305 51.1
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 3.8e-37 159.5 259 44.4
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 3.8e-37 159.5 307 42.3
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.6e-35 152.9 293 39.9
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 7.5e-33 145.2 293 40.3
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 1.3e-32 144.4 317 45.4
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 1.1e-31 141.4 313 45.7
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 3.3e-28 129.8 390 33.6
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 4.3e-28 129.4 284 41.2
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 5.6e-28 129.0 383 36.0
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 5.2e-26 122.5 394 35.0
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 1.2e-25 121.3 364 37.6
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 9.8e-25 118.2 379 35.9
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 7.0e-23 112.1 315 34.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 3.5e-22 109.8 265 37.7
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 9.5e-20 101.7 359 35.4
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 6.8e-18 95.5 311 39.5
Lalb_Chr09g0327841 Lupinus albus HOM05D007160 ORTHO05D005331 2.0e-17 94.0 402 27.6
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 9.9e-17 91.7 304 35.9
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 2.9e-16 90.1 306 33.3
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 8.3e-16 88.6 274 33.2
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.1e-15 88.2 293 30.7
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 1.1e-15 88.2 289 31.8
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 4.1e-15 86.3 320 36.9
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 1.2e-14 84.7 299 31.4
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.2e-14 84.7 255 38.0
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 1.0e-13 81.6 253 35.6
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.0e-13 81.6 308 36.7
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 1.3e-13 81.3 271 35.1
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.7e-13 80.9 175 40.0
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 2.3e-13 80.5 287 32.1
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 3.0e-13 80.1 296 29.1
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 3.0e-13 80.1 278 34.9
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 5.1e-13 79.3 88 50.0
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.1e-13 79.3 88 50.0
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.6e-13 79.0 333 34.2
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 8.6e-13 78.6 210 37.1
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 4.3e-12 76.3 245 33.1
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 7.3e-12 75.5 290 31.7
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 2.1e-11 73.9 258 32.2
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.1e-11 73.9 293 41.0
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 3.6e-11 73.2 115 42.6
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.1e-10 71.6 311 31.8
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.8e-10 70.9 316 34.8
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 4.0e-10 69.7 62 56.5
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 5.2e-10 69.3 182 41.8
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 5.2e-10 69.3 182 41.8
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 1.2e-09 68.2 304 35.2
TPR.G11687 Trifolium pratense HOM05D007160 ORTHO05D005331 1.2e-09 68.2 127 41.7
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 1.2e-09 68.2 326 31.9
Thhalv10008366m.g Eutrema salsugineum HOM05D009159 ORTHO05D005331 2.0e-09 67.4 321 29.0
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 2.6e-09 67.0 297 35.4
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 4.4e-09 66.2 282 40.8
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 5.8e-09 65.9 313 31.3
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 5.8e-09 65.9 179 39.1
C03p75110 Brassica napus HOM05D009159 ORTHO05D005331 7.6e-09 65.5 295 30.2
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 7.6e-09 65.5 85 47.1
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 1.7e-08 64.3 281 28.5
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 2.2e-08 63.9 170 38.2
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.2e-08 63.9 161 32.9
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.9e-08 63.5 98 41.8
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 2.9e-08 63.5 100 42.0
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.8e-08 63.2 357 29.1
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 3.8e-08 63.2 144 32.6
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 1.9e-07 60.8 174 32.2
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 2.4e-07 60.5 288 34.0
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.4e-07 60.5 79 45.6
Sc17g0005960 Simmondsia chinensis HOM05D028926 ORTHO05D005331 4.1e-07 59.7 308 30.2
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 5.4e-07 59.3 168 37.5
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 7.1e-07 58.9 289 32.2
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.1e-07 58.9 93 41.9
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.1e-07 58.9 93 43.0
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 7.1e-07 58.9 297 29.3
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 7.1e-07 58.9 162 30.9
BcaC01g00047 Brassica carinata HOM05D009159 ORTHO05D005331 9.2e-07 58.5 287 29.6
BolC3t19771H Brassica oleracea HOM05D009159 ORTHO05D005331 9.2e-07 58.5 287 29.6
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.2e-06 58.2 297 29.3
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 1.6e-06 57.8 120 42.5
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 2.1e-06 57.4 92 41.3
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 2.1e-06 57.4 312 35.9
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 2.1e-06 57.4 124 35.5
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 2.7e-06 57.0 271 28.8
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.7e-06 57.0 115 38.3
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.7e-06 57.0 120 42.5
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.6e-06 56.2 116 38.8
Sc06g0009300 Simmondsia chinensis HOM05D025247 ORTHO05D026483 4.6e-06 56.2 314 28.7
CARHR027910 Cardamine hirsuta HOM05D009159 ORTHO05D005331 6.0e-06 55.8 252 27.0
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.8e-06 55.5 93 39.8


User provided reference genes

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