Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 2.3e-108 395.6 200 100.0
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 4.6e-101 371.3 200 93.5
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 2.2e-82 309.3 200 79.5
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 6.3e-82 307.8 198 83.8
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 8.5e-79 297.4 192 81.2
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 9.4e-78 293.9 196 79.1
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 3.3e-75 285.4 161 88.8
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 1.3e-74 283.5 164 87.2
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 4.1e-73 278.5 173 78.6
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 4.1e-73 278.5 195 75.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 1.5e-72 276.6 166 81.3
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 1.0e-71 273.9 209 71.3
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 1.7e-71 273.1 163 84.0
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 2.2e-71 272.7 164 80.5
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 2.9e-71 272.3 169 77.5
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 1.1e-70 270.4 164 79.3
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 1.1e-70 270.4 155 83.9
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 9.4e-70 267.3 188 70.7
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 2.7e-69 265.8 180 76.1
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 3.6e-69 265.4 175 77.1
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 6.1e-69 264.6 160 80.6
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 7.9e-69 264.2 167 77.2
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 1.0e-68 263.8 167 78.4
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 1.0e-68 263.8 167 78.4
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.4e-68 263.5 153 82.4
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.3e-68 262.7 174 75.3
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 3.9e-68 261.9 169 75.1
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 3.9e-68 261.9 167 77.8
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 3.9e-68 261.9 164 79.3
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 3.9e-68 261.9 172 76.7
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 3.9e-68 261.9 192 70.3
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 3.9e-68 261.9 160 81.9
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 5.2e-68 261.5 163 80.4
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 2.6e-67 259.2 160 78.8
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 3.3e-67 258.8 175 73.1
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 5.7e-67 258.1 156 80.8
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 5.7e-67 258.1 172 74.4
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.3e-66 256.9 151 80.1
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 1.3e-66 256.9 151 81.5
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 1.3e-66 256.9 151 81.5
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.7e-66 256.5 155 78.1
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 1.7e-66 256.5 148 81.8
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 1.7e-66 256.5 151 81.5
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 2.2e-66 256.1 167 73.7
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 2.2e-66 256.1 159 77.4
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 3.7e-66 255.4 164 77.4
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 3.7e-66 255.4 163 76.7
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 8.2e-66 254.2 151 78.8
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 1.1e-65 253.8 170 74.1
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 1.1e-65 253.8 163 76.7
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 1.1e-65 253.8 168 74.4
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.4e-65 253.4 162 76.5
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 1.8e-65 253.1 154 79.9
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 2.4e-65 252.7 174 73.6
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 4.1e-65 251.9 171 74.3
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 7.0e-65 251.1 154 77.9
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 7.0e-65 251.1 155 76.8
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 9.1e-65 250.8 159 76.7
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 1.2e-64 250.4 164 76.2
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.2e-64 250.4 158 74.7
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 1.6e-64 250.0 158 74.7
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 2.0e-64 249.6 162 75.3
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.0e-64 249.6 148 80.4
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 3.5e-64 248.8 156 76.3
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 3.5e-64 248.8 181 71.3
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 4.5e-64 248.4 175 72.0
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 4.5e-64 248.4 175 72.0
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 5.9e-64 248.1 167 74.3
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 1.7e-63 246.5 160 75.6
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 3.8e-63 245.4 155 77.4
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 6.5e-63 244.6 169 75.7
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 2.5e-62 242.7 170 72.4
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 7.2e-62 241.1 148 79.1
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 4.8e-58 228.4 216 58.3
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 8.2e-58 227.6 163 69.3
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 4.1e-57 225.3 163 69.3
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 2.0e-56 223.0 143 76.2
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 3.5e-56 222.2 138 76.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 3.5e-56 222.2 149 71.1
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.9e-56 221.5 141 76.6
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 5.9e-56 221.5 141 76.6
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 5.9e-56 221.5 160 73.1
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 1.0e-55 220.7 159 68.6
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 1.3e-55 220.3 160 65.0
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 8.5e-55 217.6 132 78.0
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 1.1e-54 217.2 186 62.4
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 2.5e-54 216.1 124 83.1
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.5e-54 216.1 138 76.8
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 7.2e-54 214.5 135 74.8
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 1.6e-53 213.4 156 67.9
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 2.7e-53 212.6 159 66.0
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 1.8e-52 209.9 157 67.5
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 4.4e-51 205.3 156 67.3
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 4.1e-49 198.7 182 62.6
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 2.3e-44 183.0 116 74.1
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 5.2e-44 181.8 160 61.2
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.3e-42 177.2 154 63.6
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 7.0e-41 171.4 106 74.5
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 5.9e-40 168.3 153 61.4
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 3.8e-39 165.6 109 68.8
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 4.3e-38 162.2 166 53.0
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 4.3e-38 162.2 124 67.7
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 2.1e-37 159.8 152 53.3
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 9.8e-35 151.0 172 53.5
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.4e-33 147.1 93 79.6
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 4.1e-33 145.6 79 81.0
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 3.5e-32 142.5 96 72.9
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.9e-30 136.7 152 43.4
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 5.6e-30 135.2 149 49.7
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 6.2e-21 105.1 73 65.8
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 2.7e-16 89.7 138 41.3
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 1.3e-15 87.4 79 62.0
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 4.6e-08 62.4 42 71.4


User provided reference genes

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