Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G178900 Phaseolus vulgaris HOM05D009670 ORTHO05D010890 3.0e-240 834.7 411 100.0
VMungo0540G1521 Vigna mungo HOM05D009670 ORTHO05D010890 3.3e-218 761.5 411 91.5
Glyma.15G079800 Glycine max HOM05D009670 ORTHO05D010890 4.1e-152 542.0 436 68.8
Lj6g0011843 Lotus japonicus HOM05D009670 ORTHO05D010890 2.0e-103 380.2 443 54.4
Ca_00413_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 8.9e-99 364.8 456 51.5
Ca_30157_v3 Cicer arietinum L. HOM05D009670 ORTHO05D010890 8.9e-99 364.8 456 51.5
Lj1g0012311 Lotus japonicus HOM05D009670 ORTHO05D010890 6.2e-92 342.0 435 51.5
Medtr2g015330 Medicago truncatula HOM05D009670 ORTHO05D010890 5.4e-88 328.9 439 48.7
arahy.Tifrunner.gnm1.ann1.33PIHY Arachis hypogaea HOM05D009670 ORTHO05D010890 2.1e-79 300.4 446 45.5
arahy.Tifrunner.gnm1.ann1.81KKWU Arachis hypogaea HOM05D009670 ORTHO05D010890 4.6e-79 299.3 446 45.3
Psat1g200600 Pisum sativum HOM05D009670 ORTHO05D010890 3.0e-70 270.0 439 44.0
Lalb_Chr18g0059231 Lupinus albus HOM05D009670 ORTHO05D010890 1.1e-67 261.5 424 44.6
TPR.G11728 Trifolium pratense HOM05D009670 ORTHO05D010890 6.2e-60 235.7 307 50.2
Lalb_Chr15g0089411 Lupinus albus HOM05D009670 ORTHO05D010890 4.5e-58 229.6 424 42.5
Lalb_Chr20g0121361 Lupinus albus HOM05D009670 ORTHO05D010890 3.2e-56 223.4 424 42.2
Medtr4g048110 Medicago truncatula HOM05D009670 ORTHO05D010890 4.2e-56 223.0 446 41.5
TPR.G39306 Trifolium pratense HOM05D009670 ORTHO05D010890 7.4e-21 105.9 89 58.4
TPR.G39843 Trifolium pratense HOM05D009670 ORTHO05D010890 1.4e-19 101.7 89 56.2
Psat1g200480 Pisum sativum HOM05D009670 ORTHO05D010890 3.1e-19 100.5 419 29.8
Manes.17G052800 Manihot esculenta HOM05D013066 ORTHO05D010890 3.8e-17 93.6 449 31.4
Thecc.06G176400 Theobroma cacao HOM05D013066 ORTHO05D010890 3.0e-14 84.0 468 30.3
Manes.16G035200 Manihot esculenta HOM05D013066 ORTHO05D006345 3.1e-11 73.9 445 27.4
Potri.004G052900 Populus trichocarpa HOM05D058718 ORTHO05D010890 3.1e-11 73.9 407 28.7
Atru.chr10.1733 Acer truncatum HOM05D009670 ORTHO05D010890 5.3e-11 73.2 311 27.3
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 5.3e-11 73.2 416 26.9
arahy.Tifrunner.gnm1.ann1.6KS8DY Arachis hypogaea HOM05D009670 ORTHO05D010890 3.5e-10 70.5 80 51.2
CiPaw.09G066800 Carya illinoinensis HOM05D009670 ORTHO05D010890 1.0e-09 68.9 457 24.9
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 2.9e-09 67.4 413 28.3
Cfa000566 Carpinus fangiana HOM05D038757 ORTHO05D010890 5.0e-09 66.6 331 26.6
Cpa.g.sc7.22 Carica papaya HOM05D013066 ORTHO05D010890 3.2e-08 63.9 408 26.5
CANSAT35G1313 Cannabis sativa HOM05D009670 ORTHO05D010890 4.2e-08 63.5 414 27.1
Gorai.009G164800 Gossypium raimondii HOM05D013066 ORTHO05D010890 4.2e-08 63.5 329 27.7
Psat1g200520 Pisum sativum HOM05D009670 ORTHO05D010890 9.4e-08 62.4 203 32.5
Gohir.D05G159900 Gossypium hirsutum HOM05D013066 ORTHO05D010890 3.6e-07 60.5 325 28.3
Gohir.A05G157001 Gossypium hirsutum HOM05D013066 ORTHO05D010890 4.7e-07 60.1 330 27.3
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 8.0e-07 59.3 408 28.9
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 1.4e-06 58.5 395 26.1
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 5.2e-06 56.6 415 28.0
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 8.8e-06 55.8 427 27.2


User provided reference genes

Program Settings