Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 5.3e-70 267.7 148 100.0
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 5.3e-70 267.7 148 100.0
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 7.2e-59 230.7 148 86.5
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 8.2e-55 217.2 148 83.1
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.9e-39 164.9 146 67.8
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 1.1e-38 163.7 146 67.1
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.1e-38 163.7 146 67.1
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 4.1e-38 161.8 136 69.9
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.6e-37 159.8 146 65.8
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 2.7e-37 159.1 157 64.3
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 3.5e-37 158.7 152 66.4
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 1.0e-36 157.1 152 66.4
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 1.3e-36 156.8 140 65.7
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 1.3e-36 156.8 140 67.9
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.3e-36 156.8 155 65.2
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 3.8e-36 155.2 160 64.4
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 5.0e-36 154.8 140 65.7
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 6.6e-36 154.5 152 62.5
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 8.6e-36 154.1 132 68.2
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.1e-35 153.7 141 65.2
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 2.5e-35 152.5 139 64.0
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 4.3e-35 151.8 152 67.8
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 1.2e-34 150.2 143 63.6
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 1.2e-34 150.2 141 66.0
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.1e-34 149.4 144 64.6
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 2.1e-34 149.4 141 65.2
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 2.8e-34 149.1 103 78.6
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 3.6e-34 148.7 132 67.4
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 6.1e-34 147.9 145 63.4
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 8.0e-34 147.5 142 63.4
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 8.0e-34 147.5 141 64.5
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.0e-33 147.1 141 64.5
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.8e-33 146.4 158 61.4
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 2.3e-33 146.0 132 67.4
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 3.0e-33 145.6 154 66.2
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 4.0e-33 145.2 152 61.2
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 8.9e-33 144.1 133 69.2
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.5e-32 143.3 132 67.4
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 1.5e-32 143.3 160 57.5
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 3.4e-32 142.1 147 61.9
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 5.8e-32 141.4 147 57.8
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 7.5e-32 141.0 143 60.1
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 7.5e-32 141.0 122 68.9
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 1.7e-31 139.8 152 66.4
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 4.9e-31 138.3 147 59.9
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 4.9e-31 138.3 141 63.8
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 4.9e-31 138.3 147 56.5
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 4.9e-31 138.3 170 54.7
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.4e-30 136.7 141 62.4
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.9e-30 136.3 150 60.7
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 2.4e-30 136.0 134 63.4
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 7.0e-30 134.4 151 60.9
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 1.6e-29 133.3 154 59.1
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 2.0e-29 132.9 135 60.7
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 2.0e-29 132.9 136 58.1
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 6.0e-29 131.3 149 55.0
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 7.8e-29 131.0 147 60.5
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 7.8e-29 131.0 145 62.1
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.0e-28 130.6 147 56.5
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.0e-28 130.6 147 56.5
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 1.3e-28 130.2 153 57.5
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 3.0e-28 129.0 140 66.4
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 3.9e-28 128.6 153 56.9
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 5.0e-28 128.3 133 62.4
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 1.9e-27 126.3 154 58.4
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 1.9e-27 126.3 154 58.4
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 1.9e-27 126.3 143 57.3
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 3.3e-27 125.6 153 59.5
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 4.3e-27 125.2 132 62.9
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.2e-26 123.6 157 55.4
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 1.2e-26 123.6 155 56.1
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 1.6e-26 123.2 119 65.5
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 2.8e-26 122.5 134 61.9
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 2.8e-26 122.5 134 61.9
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 2.8e-26 122.5 154 55.2
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 3.6e-26 122.1 148 56.1
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 4.7e-26 121.7 104 70.2
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 4.7e-26 121.7 104 70.2
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 4.7e-26 121.7 104 70.2
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 4.7e-26 121.7 147 56.5
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 6.2e-26 121.3 133 59.4
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 8.0e-26 120.9 118 63.6
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 1.1e-25 120.6 141 59.6
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.1e-25 120.6 110 66.4
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.1e-25 120.6 156 54.5
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 1.4e-25 120.2 147 58.5
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 1.4e-25 120.2 132 56.8
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.8e-25 119.8 150 56.0
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 3.1e-25 119.0 163 53.4
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 3.1e-25 119.0 110 68.2
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 4.0e-25 118.6 140 60.0
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 5.2e-25 118.2 145 55.2
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 6.8e-25 117.9 83 77.1
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 6.8e-25 117.9 133 60.2
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 8.9e-25 117.5 153 56.9
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 1.2e-24 117.1 142 54.2
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 1.2e-24 117.1 149 55.0
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 2.0e-24 116.3 140 55.7
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 2.0e-24 116.3 148 55.4
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 2.0e-24 116.3 141 58.9
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 2.6e-24 115.9 140 57.1
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 2.6e-24 115.9 140 57.1
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 3.4e-24 115.5 78 76.9
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 7.5e-24 114.4 167 52.7
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 3.7e-23 112.1 158 56.3
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 4.9e-23 111.7 67 86.6
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 4.9e-23 111.7 141 53.9
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 6.4e-23 111.3 105 62.9
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 6.4e-23 111.3 110 61.8
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.1e-22 110.5 147 55.1
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 3.2e-22 109.0 145 52.4
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 2.7e-21 105.9 136 55.1
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.0e-20 104.0 132 56.8
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 1.3e-20 103.6 76 71.1
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 2.3e-20 102.8 124 51.6
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 6.6e-20 101.3 87 64.4
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 1.1e-19 100.5 79 65.8
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 2.5e-19 99.4 102 54.9
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 3.7e-15 85.5 133 51.1
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 2.4e-14 82.8 120 48.3
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 1.2e-13 80.5 111 49.5
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 3.0e-12 75.9 86 55.8
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 3.9e-12 75.5 126 49.2
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 8.6e-12 74.3 56 71.4
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 1.5e-11 73.6 126 46.0
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 2.8e-10 69.3 145 41.4
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 4.7e-10 68.6 144 45.1
PRCOL_00001665 Prasinoderma coloniale HOM05D005954 ORTHO05D007347 1.9e-06 56.6 81 51.9


User provided reference genes

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