Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 4.4e-110 401.4 210 100.0
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 7.0e-100 367.5 210 91.0
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 5.7e-94 347.8 210 85.7
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 4.9e-69 265.0 213 66.2
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 1.1e-68 263.8 215 66.5
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 3.3e-65 252.3 215 64.2
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 3.3e-65 252.3 215 64.2
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 1.1e-63 247.3 215 60.9
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 9.9e-62 240.7 216 61.6
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 2.4e-60 236.1 208 60.6
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 3.5e-59 232.3 208 59.1
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 1.1e-57 227.3 197 61.4
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 3.0e-50 202.6 198 55.1
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 2.1e-48 196.4 212 51.4
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 6.2e-48 194.9 204 49.0
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 1.4e-47 193.7 198 50.5
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 6.9e-47 191.4 188 53.7
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 1.5e-46 190.3 218 47.7
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 2.6e-46 189.5 210 50.5
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 4.5e-46 188.7 188 55.9
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 4.5e-46 188.7 202 50.0
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 7.6e-46 188.0 203 51.2
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.3e-45 187.2 187 54.5
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 4.9e-45 185.3 189 51.3
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 1.1e-44 184.1 207 50.7
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 1.9e-44 183.3 212 47.6
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 2.4e-44 183.0 188 49.5
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 9.3e-44 181.0 187 51.9
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 1.2e-43 180.6 212 47.6
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 2.7e-43 179.5 178 53.9
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 4.6e-43 178.7 208 46.2
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 2.3e-42 176.4 199 49.2
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 3.9e-42 175.6 209 48.8
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 5.1e-42 175.3 185 49.7
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 8.7e-42 174.5 200 46.5
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 1.1e-41 174.1 209 47.8
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 1.5e-41 173.7 203 47.8
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.5e-41 173.7 195 47.2
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 3.3e-41 172.6 199 53.8
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 5.6e-41 171.8 183 48.1
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 1.6e-40 170.2 203 48.8
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.1e-40 169.9 183 47.5
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 2.8e-40 169.5 198 50.0
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 2.8e-40 169.5 179 51.4
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 6.2e-40 168.3 210 49.0
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 8.1e-40 167.9 201 46.3
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 8.1e-40 167.9 208 47.6
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 8.1e-40 167.9 196 45.9
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.1e-39 167.5 186 47.8
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.1e-39 167.5 210 46.7
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.1e-39 167.5 210 46.7
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 2.4e-39 166.4 189 46.6
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 2.4e-39 166.4 203 44.3
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 2.4e-39 166.4 184 51.1
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 3.1e-39 166.0 200 45.0
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 5.3e-39 165.2 211 46.0
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 5.3e-39 165.2 188 47.3
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 1.2e-38 164.1 224 40.6
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 1.2e-38 164.1 201 45.3
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 1.5e-38 163.7 224 40.2
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 2.0e-38 163.3 205 44.9
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 1.0e-37 161.0 216 43.1
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 1.3e-37 160.6 207 44.9
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 1.3e-37 160.6 207 43.5
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 1.7e-37 160.2 216 43.5
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 3.8e-37 159.1 211 40.8
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 6.5e-37 158.3 224 38.8
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 1.4e-36 157.1 204 44.1
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 1.4e-36 157.1 198 45.5
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 3.2e-36 156.0 198 48.5
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 4.2e-36 155.6 204 45.6
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 4.2e-36 155.6 225 39.1
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 4.2e-36 155.6 198 45.5
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 4.2e-36 155.6 177 49.7
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 9.3e-36 154.5 221 38.5
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 9.3e-36 154.5 217 39.6
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 9.3e-36 154.5 214 40.7
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 2.1e-35 153.3 226 38.9
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 3.5e-35 152.5 210 43.3
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 4.6e-35 152.1 170 50.0
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 4.6e-35 152.1 198 44.4
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 6.0e-35 151.8 226 38.5
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 6.0e-35 151.8 203 43.3
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 6.0e-35 151.8 186 40.9
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 7.9e-35 151.4 170 50.0
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 7.9e-35 151.4 211 42.7
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 1.3e-34 150.6 224 38.4
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 2.3e-34 149.8 226 38.1
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 2.3e-34 149.8 226 38.1
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 3.3e-33 146.0 205 45.9
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 7.4e-33 144.8 181 47.0
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 9.6e-33 144.4 203 41.4
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 8.2e-32 141.4 196 45.4
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 1.0e-29 134.4 287 33.8
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 1.0e-29 134.4 162 47.5
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 3.8e-29 132.5 122 54.1
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.5e-28 129.8 193 40.4
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 7.4e-25 118.2 112 53.6
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 6.3e-24 115.2 177 40.7
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.4e-23 114.0 141 47.5
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.4e-23 114.0 215 35.8
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 2.4e-23 113.2 133 47.4
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 3.1e-23 112.8 211 35.1
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 9.0e-23 111.3 160 46.9
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 5.9e-22 108.6 111 49.5
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 5.9e-22 108.6 111 51.4
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 3.8e-21 105.9 80 66.2
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 3.6e-19 99.4 87 54.0
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 6.7e-18 95.1 175 37.1
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 5.7e-17 92.0 174 33.9
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 4.8e-16 89.0 202 34.2
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 2.4e-15 86.7 202 33.2
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 6.5e-13 78.6 128 37.5
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.7e-11 73.2 98 42.9
ATR0737G097 Amborella trichopoda HOM05D006968 ORTHO05D008748 5.1e-10 68.9 144 32.6
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 7.4e-09 65.1 53 50.9
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 1.7e-08 63.9 55 54.5
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 1.1e-07 61.2 53 58.5
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 2.4e-07 60.1 53 50.9


User provided reference genes

Program Settings