Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 1.4e-60 236.1 117 100.0
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 7.2e-46 187.2 113 83.2
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 2.9e-39 165.2 111 73.0
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 8.6e-39 163.7 110 74.5
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 4.2e-38 161.4 101 76.2
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 4.2e-38 161.4 104 75.0
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 7.2e-38 160.6 111 72.1
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 7.2e-38 160.6 102 76.5
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 9.5e-38 160.2 102 75.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.2e-37 159.8 110 73.6
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 3.6e-37 158.3 117 72.6
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 3.6e-37 158.3 106 74.5
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.8e-36 156.0 106 73.6
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.3e-36 155.6 87 81.6
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 2.3e-36 155.6 87 83.9
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 4.0e-36 154.8 87 81.6
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 5.2e-36 154.5 110 70.9
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 5.2e-36 154.5 87 83.9
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 5.2e-36 154.5 107 72.0
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 5.2e-36 154.5 112 69.6
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 6.8e-36 154.1 110 69.1
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 8.9e-36 153.7 112 69.6
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 8.9e-36 153.7 102 74.5
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 1.2e-35 153.3 98 74.5
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.5e-35 152.9 93 77.4
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.0e-35 152.5 114 71.9
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 2.0e-35 152.5 91 79.1
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.0e-35 152.5 115 67.0
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 2.6e-35 152.1 94 74.5
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.6e-35 152.1 112 67.0
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 3.4e-35 151.8 110 68.2
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 4.4e-35 151.4 110 68.2
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 5.7e-35 151.0 87 80.5
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 5.7e-35 151.0 107 70.1
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 7.5e-35 150.6 91 76.9
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 7.5e-35 150.6 90 76.7
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 9.8e-35 150.2 87 80.5
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 9.8e-35 150.2 87 79.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 93 77.4
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 91 79.1
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 1.3e-34 149.8 87 79.3
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.3e-34 149.8 90 80.0
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 1.3e-34 149.8 111 69.4
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.3e-34 149.8 111 67.6
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.7e-34 149.4 91 79.1
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.7e-34 149.4 87 78.2
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.7e-34 149.4 87 78.2
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.7e-34 149.4 87 78.2
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.7e-34 149.4 109 67.0
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 1.7e-34 149.4 109 68.8
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.2e-34 149.1 110 65.5
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 2.2e-34 149.1 87 79.3
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 2.8e-34 148.7 107 69.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.8e-34 148.7 109 67.0
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 3.7e-34 148.3 87 80.5
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.7e-34 148.3 87 80.5
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 4.9e-34 147.9 90 78.9
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 4.9e-34 147.9 100 70.0
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 8.3e-34 147.1 90 77.8
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.1e-33 146.7 90 76.7
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.1e-33 146.7 90 77.8
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.4e-33 146.4 87 78.2
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 1.8e-33 146.0 90 75.6
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 2.4e-33 145.6 87 77.0
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 2.4e-33 145.6 92 71.7
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.4e-33 145.6 87 79.3
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 3.1e-33 145.2 111 64.9
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 3.1e-33 145.2 110 66.4
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 4.1e-33 144.8 90 74.4
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 5.4e-33 144.4 87 78.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 9.2e-33 143.7 88 76.1
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.7e-32 142.1 112 68.8
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.7e-32 142.1 87 75.9
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.5e-32 141.7 90 74.4
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 7.8e-32 140.6 98 68.4
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 1.3e-31 139.8 110 62.7
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 2.9e-31 138.7 114 60.5
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 6.6e-31 137.5 76 84.2
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.1e-30 136.7 91 74.7
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.5e-30 136.3 102 61.8
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.3e-30 134.8 84 75.0
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 5.6e-30 134.4 77 80.5
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.2e-29 133.3 83 75.9
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.6e-29 132.9 76 81.6
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.8e-29 132.1 76 80.3
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 8.0e-29 130.6 94 67.0
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 1.8e-28 129.4 106 66.0
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 8.9e-28 127.1 107 62.6
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.6e-27 125.6 87 69.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 5.8e-27 124.4 114 56.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 7.5e-27 124.0 76 78.9
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.3e-26 123.2 71 81.7
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 4.9e-26 121.3 77 74.0
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.9e-22 109.4 120 46.7
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.2e-21 106.7 111 49.5
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 2.8e-21 105.5 98 56.1
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 4.4e-19 98.2 89 52.8
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 1.3e-15 86.7 140 35.7
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.3e-15 86.7 67 65.7
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.3e-15 86.7 76 53.9
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.7e-10 68.6 96 39.6


User provided reference genes

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