Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G165700 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 3.7e-168 594.7 286 100.0
VMungo0540G0312 Vigna mungo HOM05D005657 ORTHO05D007104 5.5e-148 527.7 317 82.6
Glyma.13G219000 Glycine max HOM05D005657 ORTHO05D007104 7.0e-135 484.2 319 75.5
Lj6g0016438 Lotus japonicus HOM05D005657 ORTHO05D007104 2.5e-124 449.1 317 70.0
Lalb_Chr18g0055371 Lupinus albus HOM05D005657 ORTHO05D007104 3.6e-123 445.3 319 69.3
Ca_00535_v3 Cicer arietinum L. HOM05D005657 ORTHO05D007104 5.7e-121 438.0 317 68.5
Medtr2g019220 Medicago truncatula HOM05D005657 ORTHO05D007104 3.0e-117 425.6 318 67.6
Psat1g188200 Pisum sativum HOM05D005657 ORTHO05D007104 2.3e-114 416.0 318 66.4
arahy.Tifrunner.gnm1.ann1.1GZ3A6 Arachis hypogaea HOM05D005657 ORTHO05D007104 1.7e-109 399.8 317 64.4
arahy.Tifrunner.gnm1.ann1.PL5EIV Arachis hypogaea HOM05D005657 ORTHO05D007104 1.9e-108 396.4 317 63.7
TPR.G26242 Trifolium pratense HOM05D005657 ORTHO05D007104 8.9e-106 387.5 289 65.1
TPR.G26236 Trifolium pratense HOM05D005657 ORTHO05D007104 3.0e-101 372.5 314 60.2
Cfa000932 Carpinus fangiana HOM05D005657 ORTHO05D007104 6.6e-101 371.3 321 59.5
CiPaw.09G122400 Carya illinoinensis HOM05D005657 ORTHO05D007104 1.6e-99 366.7 319 57.7
Actinidia39582 Actinidia chinensis HOM05D005657 ORTHO05D007104 8.4e-96 354.4 319 57.7
Gorai.009G154400 Gossypium raimondii HOM05D005657 ORTHO05D007104 1.4e-95 353.6 317 56.5
Gohir.D05G150300 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.9e-95 353.2 317 56.2
FAN11G2536 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.1e-95 352.1 288 62.2
Gohir.A05G147800 Gossypium hirsutum HOM05D005657 ORTHO05D007104 1.6e-94 350.1 317 56.2
Haze_05617 Corylus avellana HOM05D005657 ORTHO05D007104 2.1e-94 349.7 354 53.1
MD05G1282500 Malus domestica HOM05D005657 ORTHO05D007104 4.6e-94 348.6 318 59.1
QL05p057428 Quercus lobata HOM05D005657 ORTHO05D007104 6.0e-94 348.2 324 56.5
GSVIVG01021513001 Vitis vinifera HOM05D005657 ORTHO05D007104 7.8e-94 347.8 317 54.3
Ciclev10015992m.g Citrus clementina HOM05D005657 ORTHO05D007104 8.6e-93 344.4 318 58.2
Prupe.4G082300 Prunus persica HOM05D005657 ORTHO05D007104 8.6e-93 344.4 320 58.4
Thecc.06G148800 Theobroma cacao HOM05D005657 ORTHO05D007104 8.6e-93 344.4 320 55.6
FAN21G3134 Fragaria x ananassa HOM05D005657 ORTHO05D007104 1.1e-92 344.0 319 57.1
FvH4_3g05380 Fragaria vesca HOM05D005657 ORTHO05D007104 7.3e-92 341.3 319 57.1
Duzib192G0691 Durio zibethinus HOM05D005657 ORTHO05D007104 9.6e-92 340.9 335 53.7
PGR031G0971 Punica granatum HOM05D005657 ORTHO05D007104 1.2e-91 340.5 320 55.9
SalBow8G0891 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.6e-91 340.1 316 54.4
Oeu042460.1 Olea europaea HOM05D005657 ORTHO05D007104 2.8e-91 339.3 320 55.3
TWI53G0207 Tripterygium wilfordii HOM05D005657 ORTHO05D007104 3.6e-91 339.0 316 53.5
Eucgr.E01441 Eucalyptus grandis HOM05D005657 ORTHO05D007104 1.1e-90 337.4 323 55.4
Hma1.2p1_0020F.1_g014110 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 3.1e-90 335.9 317 55.2
RcHm_v2.0_Chr5g0014371 Rosa chinensis HOM05D005657 ORTHO05D007104 3.1e-90 335.9 317 56.5
TAR626G1592 Trochodendron aralioides HOM05D005657 ORTHO05D007104 3.1e-90 335.9 322 53.4
FAN16G0196 Fragaria x ananassa HOM05D005657 ORTHO05D007104 4.0e-90 335.5 319 55.8
Thhalv10008271m.g Eutrema salsugineum HOM05D005657 ORTHO05D007104 9.9e-89 330.9 321 53.0
Potri.011G084000 Populus trichocarpa HOM05D005657 ORTHO05D007104 9.9e-89 330.9 316 55.1
DCAR_007885 Daucus carota HOM05D005657 ORTHO05D007104 8.4e-88 327.8 316 53.5
CARHR029280 Cardamine hirsuta HOM05D005657 ORTHO05D007104 3.2e-87 325.9 328 52.7
Cc07_g20130 Coffea canephora HOM05D005657 ORTHO05D007104 3.2e-87 325.9 317 52.4
CANSAT35G1510 Cannabis sativa HOM05D005657 ORTHO05D007104 5.4e-87 325.1 324 52.5
Sabra11G0066600 Salix brachista HOM05D005657 ORTHO05D007104 7.1e-87 324.7 315 53.7
CAN.G1744.1 Capsicum annuum HOM05D005657 ORTHO05D007104 2.1e-86 323.2 321 53.6
HanXRQChr16g0525711 Helianthus annuus HOM05D005657 ORTHO05D007104 2.1e-86 323.2 318 51.6
Nitab4.5_0000484g0050 Nicotiana tabacum HOM05D005657 ORTHO05D007104 3.5e-86 322.4 317 53.3
A08p24690 Brassica napus HOM05D005657 ORTHO05D007104 7.8e-86 321.2 317 51.4
Aa31LG6G5550 Aethionema arabicum HOM05D005657 ORTHO05D007104 1.0e-85 320.9 323 52.3
MSTRG.16252 Avicennia marina HOM05D005657 ORTHO05D007104 1.7e-85 320.1 322 53.4
Nn4g26588 Nelumbo nucifera HOM05D005657 ORTHO05D007104 1.7e-85 320.1 320 51.6
BcaB03g12197 Brassica carinata HOM05D005657 ORTHO05D007104 5.1e-85 318.5 318 52.5
ClCG01G024690 Citrullus lanatus HOM05D005657 ORTHO05D007104 6.6e-85 318.2 319 51.7
Manes.17G071500 Manihot esculenta HOM05D005657 ORTHO05D007104 6.6e-85 318.2 325 53.2
BraA08t34424Z Brassica rapa HOM05D005657 ORTHO05D007104 1.1e-84 317.4 317 51.1
Sopen05g032420 Solanum pennellii HOM05D005657 ORTHO05D007104 1.5e-84 317.0 317 52.7
BcaC01g00157 Brassica carinata HOM05D005657 ORTHO05D007104 1.9e-84 316.6 318 51.3
C03p76410 Brassica napus HOM05D005657 ORTHO05D007104 2.5e-84 316.2 318 51.3
Solyc05g053950.4 Solanum lycopersicum HOM05D005657 ORTHO05D007104 2.5e-84 316.2 318 52.5
AT1G30130 Arabidopsis thaliana HOM05D005657 ORTHO05D007104 3.3e-84 315.8 321 50.8
Sc24g0001740 Simmondsia chinensis HOM05D005657 ORTHO05D007104 3.3e-84 315.8 317 51.7
Carub.0001s2836 Capsella rubella HOM05D005657 ORTHO05D007104 7.3e-84 314.7 317 51.7
PGSC0003DMG401013075 Solanum tuberosum HOM05D005657 ORTHO05D007104 7.3e-84 314.7 319 51.7
BolC3t19896H Brassica oleracea HOM05D005657 ORTHO05D007104 1.3e-83 313.9 318 51.6
CSS0046586 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 6.2e-83 311.6 317 51.1
CsaV3_6G051800 Cucumis sativus L. HOM05D005657 ORTHO05D007104 5.3e-82 308.5 320 50.6
Lsat_1_v5_gn_4_29400 Lactuca sativa HOM05D005657 ORTHO05D007104 6.9e-82 308.1 319 50.2
Sp1g25990 Schrenkiella parvula HOM05D005657 ORTHO05D007104 1.2e-81 307.4 321 49.5
CSS0036233 Camellia sinensis var. sinensis HOM05D005657 ORTHO05D007104 2.6e-81 306.2 317 50.5
EL10Ac8g19662 Beta vulgaris HOM05D005657 ORTHO05D007104 4.4e-81 305.4 318 51.3
MELO3C007126.2 Cucumis melo HOM05D005657 ORTHO05D007104 1.3e-80 303.9 325 50.5
THA.LOC104812673 Tarenaya hassleriana HOM05D005657 ORTHO05D007104 1.7e-80 303.5 334 49.7
FAN25G2659 Fragaria x ananassa HOM05D005657 ORTHO05D007104 2.2e-80 303.1 275 59.3
Sed0002032 Sechium edule HOM05D005657 ORTHO05D007104 1.2e-78 297.4 317 49.8
ECA234G1983 Erigeron canadensis HOM05D005657 ORTHO05D007104 1.6e-78 297.0 315 50.2
vmacro10957 Vaccinium macrocarpon HOM05D005657 ORTHO05D007104 1.3e-77 293.9 369 45.5
MBI18_g24473_MAGBIO Magnolia biondii HOM05D005657 ORTHO05D007104 1.7e-77 293.5 319 49.2
Aqoxy1G01688 Aquilegia oxysepala HOM05D005657 ORTHO05D007104 2.3e-77 293.1 327 47.4
PSO339G2615 Papaver somniferum HOM05D005657 ORTHO05D007104 1.1e-74 284.3 324 48.1
Ah.09g232540 Amaranthus hybridus HOM05D005657 ORTHO05D007104 3.4e-73 279.3 321 47.7
PSO384G4094 Papaver somniferum HOM05D005657 ORTHO05D007104 3.8e-72 275.8 323 47.4
Peaxi162Scf00394g00119 Petunia axillaris HOM05D005657 ORTHO05D007104 6.4e-72 275.0 256 54.3
SEGI_34988 Sequoiadendron giganteum HOM05D005657 ORTHO05D007104 3.5e-70 269.2 333 45.0
ATR1098G050 Amborella trichopoda HOM05D005657 ORTHO05D007104 1.0e-69 267.7 330 46.4
AUR62002729 Chenopodium quinoa HOM05D005657 ORTHO05D007104 8.7e-69 264.6 244 52.9
Rhsim02G0159200 Rhododendron simsii HOM05D005657 ORTHO05D007104 3.3e-68 262.7 319 47.0
Migut.D01761 Erythranthe guttata HOM05D005657 ORTHO05D007104 3.7e-67 259.2 277 52.3
Actinidia07705 Actinidia chinensis HOM05D005657 ORTHO05D007104 1.8e-66 256.9 288 51.0
Dinv30768 Davidia involucrata HOM05D005657 ORTHO05D007104 1.8e-66 256.9 241 56.0
Nitab4.5_0000717g0030 Nicotiana tabacum HOM05D005657 ORTHO05D007104 2.0e-65 253.4 240 55.0
HPP92_012186 Vanilla planifolia HOM05D005657 ORTHO05D007104 8.4e-64 248.1 332 42.2
Zm00001eb300160 Zea mays HOM05D005657 ORTHO05D007104 7.9e-62 241.5 332 44.3
Glyma.15G093200 Glycine max HOM05D005657 ORTHO05D007104 9.6e-60 234.6 154 77.9
Lj2A319G39 Lonicera japonica HOM05D005657 ORTHO05D007104 2.6e-57 226.5 220 52.3
Hund15862 Selenicereus undatus HOM05D005657 ORTHO05D007104 5.0e-56 222.2 291 46.4
DCAR_027907 Daucus carota HOM05D005657 ORTHO05D007104 1.4e-55 220.7 314 41.7
DCAR_027906 Daucus carota HOM05D005657 ORTHO05D007104 3.2e-55 219.5 315 40.6
SalBow2G3627 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.6e-54 217.2 322 39.8
SalBow2G2566 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.9e-52 210.3 287 42.5
DCAR_027905 Daucus carota HOM05D005657 ORTHO05D007104 9.7e-52 208.0 247 42.9
AUR62030180 Chenopodium quinoa HOM05D005657 ORTHO05D007104 5.3e-50 202.2 176 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1613 Anthoceros agrestis HOM05D001134 ORTHO05D001035 6.9e-50 201.8 330 39.1
CDE01G0002 Ceratophyllum demersum HOM05D005657 ORTHO05D007104 9.0e-50 201.4 249 47.4
Mapoly0156s0023 Marchantia polymorpha HOM05D005657 ORTHO05D007104 2.6e-49 199.9 289 41.9
SMO364G0117 Selaginella moellendorffii HOM05D005657 ORTHO05D007104 3.4e-49 199.5 322 41.0
Pp3c19_5890 Physcomitrium patens HOM05D005657 ORTHO05D007104 1.7e-48 197.2 324 38.6
Atru.chr10.1193 Acer truncatum HOM05D005657 ORTHO05D007104 2.9e-48 196.4 212 50.5
AUR62002725 Chenopodium quinoa HOM05D005657 ORTHO05D007104 1.0e-45 188.0 193 50.3
Hma1.2p1_0020F.1_g014120 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 5.1e-45 185.7 143 59.4
Rhsim02G0159300 Rhododendron simsii HOM05D005657 ORTHO05D007104 5.1e-45 185.7 175 51.4
BcaB03g12196 Brassica carinata HOM05D005657 ORTHO05D007104 3.3e-44 183.0 173 50.3
TPR.G26247 Trifolium pratense HOM05D005657 ORTHO05D007104 9.1e-42 174.9 114 73.7
Hma1.2p1_0020F.1_g014100 Hydrangea macrophylla HOM05D005657 ORTHO05D007104 2.0e-41 173.7 154 59.1
PGSC0003DMG400002455 Solanum tuberosum HOM05D005657 ORTHO05D007104 1.6e-38 164.1 142 52.8
unitig_26.g9756 Utricularia gibba HOM05D005657 ORTHO05D007104 3.6e-38 162.9 143 58.7
Os07g0153300 Oryza sativa ssp. japonica HOM05D005657 ORTHO05D007104 2.2e-32 143.7 160 48.1
SGA_v2.0_scaffold333G48980 Striga asiatica HOM05D005657 ORTHO05D007104 3.0e-29 133.3 126 53.2
MCO14G385 Micromonas commoda HOM05D005657 ORTHO05D007104 1.1e-23 114.8 238 33.6
Phvul.007G245866 Phaseolus vulgaris HOM05D005657 ORTHO05D007104 9.8e-20 101.7 47 91.5
PRCOL_00005919 Prasinoderma coloniale HOM05D005657 ORTHO05D007104 2.8e-19 100.1 253 27.3
SalBow2G0785 Salvia bowleyana HOM05D005657 ORTHO05D007104 1.1e-18 98.2 119 46.2
TPR.G7274 Trifolium pratense HOM05D005657 ORTHO05D007104 1.1e-18 98.2 59 71.2
unitig_26.g9757 Utricularia gibba HOM05D005657 ORTHO05D007104 2.4e-18 97.1 70 55.7
CBR_g39195 Chara braunii HOM05D005657 ORTHO05D007104 4.5e-17 92.8 98 50.0
Cre06.g269300 Chlamydomonas reinhardtii HOM05D005657 ORTHO05D007104 3.8e-16 89.7 218 28.4
COL.COLO4_31053 Corchorus olitorius HOM05D005657 ORTHO05D007104 4.7e-14 82.8 53 64.2
Duzib160G0546 Durio zibethinus HOM05D005657 ORTHO05D007104 2.5e-07 60.5 36 63.9


User provided reference genes

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