Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 1.8e-145 519.2 262 100.0
VMungo0540G1711 Vigna mungo HOM05D007839 ORTHO05D009924 2.3e-68 263.1 262 59.5
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 6.1e-53 211.8 244 52.0
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 3.5e-40 169.5 265 43.8
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.1e-37 160.2 272 42.6
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 2.8e-29 133.3 216 46.3
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 3.7e-26 122.9 250 38.0
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.2e-24 117.9 210 40.0
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 2.7e-24 116.7 194 41.2
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 1.3e-23 114.4 176 42.6
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 2.3e-23 113.6 243 36.2
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 8.6e-23 111.7 193 38.9
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 8.6e-23 111.7 206 39.3
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.5e-22 110.2 238 35.7
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 5.6e-22 109.0 237 35.4
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.6e-22 109.0 208 35.6
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 3.6e-21 106.3 238 34.9
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 3.6e-21 106.3 187 39.0
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 3.6e-21 106.3 190 40.0
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 4.7e-21 105.9 205 38.0
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 6.2e-21 105.5 188 36.2
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 8.1e-21 105.1 203 36.5
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 8.1e-21 105.1 187 35.3
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 2.4e-20 103.6 206 35.4
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.1e-20 103.2 226 35.4
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 3.1e-20 103.2 226 35.4
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 3.1e-20 103.2 250 34.4
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 3.1e-20 103.2 205 36.1
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 5.2e-20 102.4 250 31.6
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 6.8e-20 102.1 163 38.0
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 8.9e-20 101.7 174 39.7
arahy.Tifrunner.gnm1.ann1.9V8GBM Arachis hypogaea HOM05D007839 ORTHO05D009924 1.2e-19 101.3 261 34.1
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.2e-19 101.3 226 35.0
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 2.0e-19 100.5 216 36.6
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 2.0e-19 100.5 227 35.2
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 3.4e-19 99.8 236 32.2
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 4.4e-19 99.4 203 33.5
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 4.4e-19 99.4 220 35.9
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 5.8e-19 99.0 205 35.1
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.3e-18 97.8 242 31.8
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 1.7e-18 97.4 205 31.2
Glyma.13G218176 Glycine max HOM05D007839 ORTHO05D009924 1.7e-18 97.4 131 48.1
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 2.2e-18 97.1 201 37.3
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 3.8e-18 96.3 238 32.8
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 8.4e-18 95.1 194 35.6
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 8.4e-18 95.1 194 35.6
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 8.4e-18 95.1 198 36.4
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 8.4e-18 95.1 209 34.0
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.1e-17 94.7 172 38.4
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 1.4e-17 94.4 146 40.4
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 2.4e-17 93.6 167 37.1
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 4.2e-17 92.8 207 33.8
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 4.2e-17 92.8 169 39.6
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 5.4e-17 92.4 145 37.9
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 7.1e-17 92.0 236 34.3
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 9.3e-17 91.7 161 37.9
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 3.5e-16 89.7 145 42.8
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 3.5e-16 89.7 169 39.1
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 4.6e-16 89.4 204 29.9
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 7.8e-16 88.6 204 29.9
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.0e-15 88.2 130 41.5
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 1.3e-15 87.8 130 40.0
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.7e-15 87.4 133 39.1
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 2.3e-15 87.0 124 37.9
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 3.9e-15 86.3 207 34.8
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 8.7e-15 85.1 181 37.0
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 1.1e-14 84.7 133 36.8
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 1.9e-14 84.0 133 36.8
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 5.6e-14 82.4 153 40.5
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 5.6e-14 82.4 138 42.0
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 7.3e-14 82.0 231 31.2
Gorai.010G238500 Gossypium raimondii HOM05D007839 ORTHO05D009924 3.6e-13 79.7 237 30.4
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 4.0e-12 76.3 132 40.2
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 6.9e-12 75.5 147 34.0
Gohir.D06G204450 Gossypium hirsutum HOM05D007839 ORTHO05D009924 6.9e-12 75.5 181 33.1
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 9.0e-12 75.1 125 40.8
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 2.0e-11 73.9 107 41.1
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 9.3e-09 65.1 95 42.1
Glyma.13G144800 Glycine max HOM05D002910 ORTHO05D003235 1.2e-08 64.7 66 54.5
Manes.17G070000 Manihot esculenta HOM05D008587 ORTHO05D010485 2.1e-08 63.9 84 40.5
QL05p058141 Quercus lobata HOM05D008587 ORTHO05D010485 2.1e-08 63.9 105 41.0
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 6.0e-08 62.4 188 29.8
ATR1091G011 Amborella trichopoda HOM05D007839 ORTHO05D009924 2.3e-07 60.5 144 30.6
CiPaw.09G123400 Carya illinoinensis HOM05D008587 ORTHO05D010485 3.9e-07 59.7 123 35.0
ATR1091G017 Amborella trichopoda HOM05D007839 ORTHO05D009924 1.1e-06 58.2 175 30.3
QL05p058191 Quercus lobata HOM05D008587 ORTHO05D010485 7.3e-06 55.5 132 36.4
FAN11G1722 Fragaria x ananassa HOM05D014465 ORTHO05D010485 9.6e-06 55.1 121 38.0
FAN16G1258 Fragaria x ananassa HOM05D014465 ORTHO05D010485 9.6e-06 55.1 86 43.0


User provided reference genes

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