Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 8.1e-241 836.6 419 100.0
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.0e-202 709.1 428 85.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 6.1e-172 607.8 424 76.9
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 3.4e-154 548.9 422 71.8
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 6.0e-143 511.5 458 61.8
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.7e-142 510.0 420 65.7
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 1.4e-136 490.3 429 63.6
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.3e-129 467.2 481 57.4
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 6.7e-126 454.9 401 64.3
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 3.3e-125 452.6 486 54.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 7.4e-125 451.4 416 62.7
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 7.6e-106 388.3 359 61.0
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.6e-103 380.6 336 62.8
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 2.1e-95 353.6 429 50.3
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 4.4e-93 345.9 435 46.9
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 1.3e-92 344.4 432 49.1
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.9e-88 330.5 427 48.7
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.3e-81 307.8 432 46.3
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 3.8e-81 306.2 445 44.0
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 4.2e-80 302.8 430 45.6
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 5.5e-80 302.4 432 47.0
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 1.8e-78 297.4 429 44.5
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 4.0e-78 296.2 425 45.9
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 6.7e-78 295.4 426 44.6
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 3.3e-77 293.1 417 45.1
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.3e-77 293.1 411 45.0
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 9.7e-77 291.6 496 40.5
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 4.1e-75 286.2 437 42.3
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 4.5e-74 282.7 423 43.5
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 1.3e-73 281.2 442 42.3
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 1.1e-72 278.1 427 43.6
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.2e-72 276.6 410 43.9
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 2.7e-71 273.5 422 42.7
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 6.8e-70 268.9 466 41.6
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 5.7e-69 265.8 417 43.4
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 9.8e-69 265.0 426 42.3
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 4.8e-68 262.7 423 42.3
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.8e-68 262.7 423 42.3
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.1e-67 260.0 434 40.6
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 5.4e-67 259.2 410 41.7
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.0e-67 258.8 423 42.1
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.5e-66 256.5 423 41.1
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.7e-65 254.2 427 41.5
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 8.6e-65 251.9 364 45.1
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 4.0e-62 243.0 430 39.5
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 5.7e-61 239.2 433 39.7
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 8.3e-60 235.3 436 35.6
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 7.8e-58 228.8 417 37.9
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 3.8e-57 226.5 450 39.3
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 8.6e-57 225.3 427 38.4
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.2e-52 210.7 421 37.3
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 4.9e-52 209.5 354 39.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.9e-52 209.5 428 36.4
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 2.7e-50 203.8 338 37.9
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 7.8e-50 202.2 213 53.1
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 3.3e-48 196.8 453 34.0
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.2e-47 194.9 444 35.1
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 3.6e-47 193.4 386 36.8
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 4.0e-46 189.9 427 31.4
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.5e-45 188.0 421 36.6
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 2.0e-45 187.6 231 47.2
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 3.4e-45 186.8 432 34.0
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 2.2e-44 184.1 432 31.2
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.2e-44 184.1 378 34.4
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 2.2e-44 184.1 419 33.7
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 1.1e-43 181.8 390 34.9
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.9e-43 181.0 327 36.1
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 2.4e-43 180.6 309 39.2
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 2.8e-39 167.2 162 54.9
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 4.7e-39 166.4 174 49.4
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 1.4e-38 164.9 426 32.2
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 3.7e-36 156.8 372 34.9
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 6.4e-36 156.0 413 31.2
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 3.0e-33 147.1 409 32.3
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 5.1e-33 146.4 126 60.3
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 6.2e-31 139.4 328 34.1
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 5.2e-30 136.3 301 36.2
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 6.8e-30 136.0 323 32.8
VMungo0647G1723 Vigna mungo HOM05D007369 ORTHO05D009369 1.1e-27 128.6 78 79.5
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 2.4e-27 127.5 93 65.6
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 7.1e-27 125.9 354 32.8
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 6.0e-26 122.9 152 46.7
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 5.1e-25 119.8 248 36.7
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 6.6e-25 119.4 408 29.7
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.5e-24 118.2 219 37.9
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 2.4e-22 110.9 159 44.7
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.3e-20 105.1 250 34.0
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 5.1e-17 93.2 122 41.0
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 2.8e-15 87.4 71 52.1
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 2.4e-14 84.3 427 27.4
Lalb_Chr20g0118171 Lupinus albus HOM05D007369 ORTHO05D009369 6.9e-14 82.8 56 78.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 4.2e-11 73.6 72 58.3
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 4.6e-10 70.1 75 42.7
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.8e-09 68.2 193 29.5
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.1e-06 58.9 76 50.0


User provided reference genes

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