Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G154800 Phaseolus vulgaris HOM05D009090 ORTHO05D011038 1.5e-78 296.6 209 100.0
VMungo0540G1607 Vigna mungo HOM05D009090 ORTHO05D011038 1.8e-71 273.1 177 94.4
Glyma.13G209700 Glycine max HOM05D009090 ORTHO05D011038 4.3e-57 225.3 186 79.6
Lj6g0021162 Lotus japonicus HOM05D009090 ORTHO05D011038 1.5e-49 200.3 181 74.6
Ca_00615_v3 Cicer arietinum L. HOM05D009090 ORTHO05D011038 5.4e-44 181.8 167 67.7
TPR.G14182 Trifolium pratense HOM05D009090 ORTHO05D011038 2.5e-41 172.9 178 64.6
Lalb_Chr15g0087331 Lupinus albus HOM05D009090 ORTHO05D011038 3.1e-39 166.0 183 55.7
arahy.Tifrunner.gnm1.ann1.SV24MS Arachis hypogaea HOM05D009090 ORTHO05D011038 5.8e-38 161.8 181 63.0
Psat1g184400 Pisum sativum HOM05D009090 ORTHO05D011038 4.2e-36 155.6 177 55.4
Medtr2g021630 Medicago truncatula HOM05D009090 ORTHO05D011038 5.8e-30 135.2 163 60.1
TPR.G67 Trifolium pratense HOM05D009090 ORTHO05D011038 3.8e-29 132.5 200 51.5
TPR.G38163 Trifolium pratense HOM05D009090 ORTHO05D011038 6.4e-29 131.7 207 51.2
Medtr2g021600 Medicago truncatula HOM05D009090 ORTHO05D011038 1.5e-25 120.6 182 46.2
Medtr2g021510 Medicago truncatula HOM05D009090 ORTHO05D011038 1.9e-25 120.2 178 44.4
Medtr2g021480 Medicago truncatula HOM05D009090 ORTHO05D011038 3.9e-18 95.9 90 55.6
Medtr2g020500 Medicago truncatula HOM05D009090 ORTHO05D011038 1.1e-17 94.4 90 58.9
Medtr2g021590 Medicago truncatula HOM05D009090 ORTHO05D011038 2.8e-16 89.7 231 37.7
Medtr0485s0020 Medicago truncatula HOM05D009090 ORTHO05D011038 1.1e-15 87.8 175 44.0
Medtr2g021640 Medicago truncatula HOM05D009090 ORTHO05D011038 1.1e-15 87.8 163 49.1
Medtr2g021560 Medicago truncatula HOM05D009090 ORTHO05D011038 2.0e-14 83.6 93 49.5
Medtr2g022750 Medicago truncatula HOM05D009090 ORTHO05D011038 3.8e-13 79.3 183 41.5
Medtr3g087310 Medicago truncatula HOM05D009090 ORTHO05D011038 3.8e-13 79.3 66 56.1
Medtr2g021450 Medicago truncatula HOM05D009090 ORTHO05D011038 6.5e-13 78.6 155 34.2
Medtr2g021660 Medicago truncatula HOM05D009090 ORTHO05D011038 8.4e-13 78.2 184 44.6
Medtr2g021530 Medicago truncatula HOM05D009090 ORTHO05D011038 1.1e-12 77.8 67 55.2
TPR.G14178 Trifolium pratense HOM05D009090 ORTHO05D011038 2.5e-12 76.6 68 60.3
Medtr2g021570 Medicago truncatula HOM05D009090 ORTHO05D011038 5.5e-12 75.5 59 62.7
Medtr5g048270 Medicago truncatula HOM05D009090 ORTHO05D011038 2.7e-11 73.2 226 25.7
Medtr1g048260 Medicago truncatula HOM05D009090 ORTHO05D011038 4.6e-11 72.4 64 53.1
Medtr1g025810 Medicago truncatula HOM05D009090 ORTHO05D011038 1.0e-10 71.2 67 50.7
Medtr1g025830 Medicago truncatula HOM05D009090 ORTHO05D011038 1.3e-10 70.9 217 27.6
Lj6g0014323 Lotus japonicus HOM05D000007 ORTHO05D000017 7.4e-09 65.1 87 43.7
Glyma.08G350400 Glycine max HOM05D000007 ORTHO05D000017 1.3e-08 64.3 55 47.3
Lj6g0009082 Lotus japonicus HOM05D000007 ORTHO05D000017 1.3e-08 64.3 76 43.4
Ca_10652_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.6e-08 63.9 51 56.9
Lj6g0021912 Lotus japonicus HOM05D000007 ORTHO05D000017 2.8e-08 63.2 48 62.5
arahy.Tifrunner.gnm1.ann1.ZKR6DP Arachis hypogaea HOM05D009090 ORTHO05D011038 3.7e-08 62.8 87 39.1
Medtr1g025850 Medicago truncatula HOM05D009090 ORTHO05D011038 6.3e-08 62.0 197 36.0
Lj2g0028230 Lotus japonicus HOM05D000007 ORTHO05D000017 8.2e-08 61.6 50 58.0
Lj6g0001868 Lotus japonicus HOM05D000007 ORTHO05D000017 8.2e-08 61.6 50 56.0
Glyma.02G041600 Glycine max HOM05D000007 ORTHO05D000017 1.4e-07 60.8 64 45.3
Lj5g0004151 Lotus japonicus HOM05D000007 ORTHO05D000017 1.8e-07 60.5 76 39.5
Lj6g0010833 Lotus japonicus HOM05D000007 ORTHO05D000017 1.8e-07 60.5 61 50.8
Medtr4g107780 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-07 60.5 70 45.7
Medtr4g107820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.8e-07 60.5 70 45.7
Ca_00600_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.4e-07 60.1 45 62.2
TPR.G40220 Trifolium pratense HOM05D000007 ORTHO05D000017 2.4e-07 60.1 60 51.7
Glyma.15G101600 Glycine max HOM05D000007 ORTHO05D000017 3.1e-07 59.7 45 57.8
Medtr3g011060 Medicago truncatula HOM05D000007 ORTHO05D000017 3.1e-07 59.7 45 62.2
Glyma.13G211000 Glycine max HOM05D000007 ORTHO05D000017 4.1e-07 59.3 45 57.8
Medtr3g011020 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-07 59.3 45 62.2
Medtr3g036430 Medicago truncatula HOM05D000007 ORTHO05D000017 4.1e-07 59.3 59 50.8
Hma1.2p1_0187F.1_g081920 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 5.3e-07 58.9 48 54.2
Lj6g0008383 Lotus japonicus HOM05D000007 ORTHO05D000017 5.3e-07 58.9 45 60.0
Duzib212G0784 Durio zibethinus HOM05D000007 ORTHO05D000017 6.9e-07 58.5 49 51.0
Phvul.006G157000 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 6.9e-07 58.5 45 57.8
Psat1g018880 Pisum sativum HOM05D000007 ORTHO05D000017 6.9e-07 58.5 48 54.2
Lj5g0009403 Lotus japonicus HOM05D000007 ORTHO05D000017 9.0e-07 58.2 81 42.0
Medtr1g015740 Medicago truncatula HOM05D000007 ORTHO05D000017 9.0e-07 58.2 63 49.2
Medtr2g046920 Medicago truncatula HOM05D000007 ORTHO05D000017 9.0e-07 58.2 71 39.4
Potri.006G170300 Populus trichocarpa HOM05D000007 ORTHO05D000039 9.0e-07 58.2 71 45.1
THA.LOC104818178 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 9.0e-07 58.2 42 61.9
Duzib212G0507 Durio zibethinus HOM05D000007 ORTHO05D011038 1.2e-06 57.8 50 52.0
Lj6g0019357 Lotus japonicus HOM05D000007 ORTHO05D000017 1.2e-06 57.8 52 50.0
Lj6g0027065 Lotus japonicus HOM05D000007 ORTHO05D000017 1.2e-06 57.8 50 54.0
Psat6g108160 Pisum sativum HOM05D000007 ORTHO05D000017 1.2e-06 57.8 43 58.1
Ca_10651_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.5e-06 57.4 57 50.9
Ca_10654_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 1.5e-06 57.4 57 50.9
Lalb_Chr03g0041721 Lupinus albus HOM05D000007 ORTHO05D000017 1.5e-06 57.4 74 37.8
Medtr3g007270 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-06 57.4 64 46.9
Medtr4g108820 Medicago truncatula HOM05D000007 ORTHO05D000017 1.5e-06 57.4 61 47.5
Psat6g189640 Pisum sativum HOM05D000007 ORTHO05D000017 1.5e-06 57.4 70 41.4
Psat6g189920 Pisum sativum HOM05D000007 ORTHO05D000017 1.5e-06 57.4 70 41.4
Psat6g222080 Pisum sativum HOM05D000007 ORTHO05D000017 1.5e-06 57.4 50 54.0
RcHm_v2.0_Chr2g0086041 Rosa chinensis HOM05D000007 ORTHO05D013322 1.5e-06 57.4 53 45.3
TPR.G20835 Trifolium pratense HOM05D009090 ORTHO05D011038 1.5e-06 57.4 176 41.5
Medtr1g047490 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-06 57.0 45 57.8
TPR.G17061 Trifolium pratense HOM05D000007 ORTHO05D000017 2.0e-06 57.0 51 51.0
VMungo0540G1914 Vigna mungo HOM05D000007 ORTHO05D000017 2.0e-06 57.0 80 42.5
Ca_00604_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 2.6e-06 56.6 45 57.8
Glyma.06G016300 Glycine max HOM05D000007 ORTHO05D000017 2.6e-06 56.6 57 45.6
Lalb_Chr18g0055981 Lupinus albus HOM05D000007 ORTHO05D000017 2.6e-06 56.6 66 43.9
RcHm_v2.0_Chr2g0167131 Rosa chinensis HOM05D000007 ORTHO05D000017 2.6e-06 56.6 46 52.2
Sc16g0006210 Simmondsia chinensis HOM05D000007 ORTHO05D011038 2.6e-06 56.6 85 38.8
PGSC0003DMG400046798 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-06 56.6 49 44.9
VMungo0720G2115 Vigna mungo HOM05D000007 ORTHO05D000017 2.6e-06 56.6 53 50.9
Glyma.10G220500 Glycine max HOM05D000007 ORTHO05D000017 3.4e-06 56.2 72 44.4
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 3.4e-06 56.2 48 50.0
Medtr6g460450 Medicago truncatula HOM05D000007 ORTHO05D000017 3.4e-06 56.2 46 54.3
Peaxi162Scf00001g04121 Petunia axillaris HOM05D000007 ORTHO05D013549 3.4e-06 56.2 54 48.1
arahy.Tifrunner.gnm1.ann1.AP71S7 Arachis hypogaea HOM05D000007 ORTHO05D000017 4.5e-06 55.8 58 43.1
Ca_10650_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000017 4.5e-06 55.8 42 57.1
FAN02G3574 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 55.8 60 46.7
Lalb_Chr15g0087251 Lupinus albus HOM05D000007 ORTHO05D000017 4.5e-06 55.8 45 53.3
Medtr7g022670 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 55.8 45 46.7
Medtr7g078050 Medicago truncatula HOM05D000007 ORTHO05D000017 4.5e-06 55.8 46 50.0
Phvul.007G113100 Phaseolus vulgaris HOM05D000007 ORTHO05D000017 4.5e-06 55.8 60 46.7
Ciclev10027434m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.9e-06 55.5 49 46.9
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 5.9e-06 55.5 51 45.1
FAN09G1614 Fragaria x ananassa HOM05D000007 ORTHO05D000017 5.9e-06 55.5 41 53.7
Manes.07G039200 Manihot esculenta HOM05D000007 ORTHO05D000039 5.9e-06 55.5 46 52.2
Medtr0044s0300 Medicago truncatula HOM05D000007 ORTHO05D000017 5.9e-06 55.5 45 57.8
Medtr7g091630 Medicago truncatula HOM05D000007 ORTHO05D000017 5.9e-06 55.5 48 50.0
Eucgr.H02939 Eucalyptus grandis HOM05D000007 ORTHO05D000017 7.7e-06 55.1 44 47.7
FAN14G4497 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.7e-06 55.1 60 46.7
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 7.7e-06 55.1 46 50.0
Medtr1g094210 Medicago truncatula HOM05D000007 ORTHO05D000017 7.7e-06 55.1 44 52.3
Medtr4g129190 Medicago truncatula HOM05D000007 ORTHO05D000017 7.7e-06 55.1 45 55.6
Medtr7g056760 Medicago truncatula HOM05D000007 ORTHO05D000017 7.7e-06 55.1 66 43.9
Nn7g37391 Nelumbo nucifera HOM05D000007 ORTHO05D000017 7.7e-06 55.1 50 48.0
Nn8g39767 Nelumbo nucifera HOM05D000007 ORTHO05D000017 7.7e-06 55.1 50 48.0
Psat0s2190g0080 Pisum sativum HOM05D000007 ORTHO05D000017 7.7e-06 55.1 49 57.1
RcHm_v2.0_Chr1g0344471 Rosa chinensis HOM05D000007 ORTHO05D000039 7.7e-06 55.1 48 45.8
TPR.G19014 Trifolium pratense HOM05D000007 ORTHO05D000017 7.7e-06 55.1 48 52.1
TPR.G3820 Trifolium pratense HOM05D000007 ORTHO05D000017 7.7e-06 55.1 45 60.0
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 1.0e-05 54.7 50 52.0
FvH4_6g39910 Fragaria vesca HOM05D000007 ORTHO05D000017 1.0e-05 54.7 60 46.7
Glyma.15G101700 Glycine max HOM05D000007 ORTHO05D000017 1.0e-05 54.7 65 47.7
Lj3C973T7 Lonicera japonica HOM05D000007 ORTHO05D000017 1.0e-05 54.7 45 53.3
Medtr3g007360 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-05 54.7 60 45.0
Medtr3g007410 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-05 54.7 60 45.0
Medtr4g033495 Medicago truncatula HOM05D000007 ORTHO05D000017 1.0e-05 54.7 47 53.2
Peaxi162Scf00001g00418 Petunia axillaris HOM05D000007 ORTHO05D013549 1.0e-05 54.7 53 47.2
Sabra06G0131000 Salix brachista HOM05D000007 ORTHO05D000039 1.0e-05 54.7 76 40.8
vmacro18930 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.0e-05 54.7 69 39.1


User provided reference genes

Program Settings