Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 4.6e-28 127.1 60 100.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 3.3e-26 120.9 60 95.0
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 4.3e-26 120.6 60 95.0
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 93.3
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 2.8e-25 117.9 60 95.0
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 3.6e-25 117.5 59 93.2
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 4.7e-25 117.1 59 93.2
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.0e-25 116.3 60 91.7
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.0e-25 116.3 60 91.7
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.8e-24 115.2 60 91.7
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.8e-24 115.2 60 91.7
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.8e-24 115.2 60 91.7
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.8e-24 115.2 60 91.7
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 3.1e-24 114.4 60 90.0
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 4.0e-24 114.0 60 90.0
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 4.0e-24 114.0 60 88.3
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 1.2e-23 112.5 60 90.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.5e-23 112.1 57 91.2
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.6e-23 111.3 60 90.0
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 9.8e-23 109.4 60 88.3
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-22 109.0 60 88.3
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 2.9e-22 107.8 60 86.7
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.4e-22 106.7 58 87.9
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 8.3e-22 106.3 60 83.3
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 2.4e-21 104.8 59 83.1
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 5.4e-21 103.6 59 84.7
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 2.7e-20 101.3 60 80.0
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 6.0e-20 100.1 58 82.8
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 7.8e-20 99.8 60 80.0
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 1.3e-19 99.0 51 88.2
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 6.6e-19 96.7 50 88.0
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 9.5e-18 92.8 51 84.3
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 3.1e-16 87.8 43 93.0
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 2.2e-14 81.6 41 87.8
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 4.9e-14 80.5 44 81.8
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 8.3e-14 79.7 38 92.1
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 8.3e-14 79.7 38 92.1
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.4e-13 79.0 41 85.4
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 3.2e-13 77.8 38 94.7
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-12 75.1 39 87.2
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 1.0e-11 72.8 56 57.1
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 1.0e-11 72.8 56 57.1
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 1.9e-10 68.6 31 93.5
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 3.3e-10 67.8 39 79.5
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 3.3e-10 67.8 32 93.8
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 4.7e-09 63.9 47 66.0
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 8.1e-09 63.2 45 62.2
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 1.4e-08 62.4 31 87.1
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.4e-08 62.4 31 90.3
BraSC58t46454Z Brassica rapa HOM05D001966 ORTHO05D010449 4.0e-08 60.8 28 92.9
BraSC143t45650Z Brassica rapa HOM05D001966 ORTHO05D010449 1.2e-07 59.3 33 81.8
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.2e-07 59.3 37 78.4


User provided reference genes

Program Settings