Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 3.2e-92 341.7 161 100.0
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 2.0e-83 312.4 161 92.5
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 5.6e-81 304.3 158 89.9
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 7.3e-81 303.9 161 88.8
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 2.5e-73 278.9 161 81.4
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 1.6e-72 276.2 161 80.1
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 3.1e-71 271.9 161 80.1
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 4.0e-71 271.6 161 78.9
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 8.9e-71 270.4 158 79.7
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 3.2e-68 261.9 158 75.9
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 1.2e-67 260.0 160 73.8
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.6e-67 259.6 158 75.3
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 1.6e-67 259.6 152 82.2
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 3.5e-67 258.5 161 77.0
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 4.6e-67 258.1 158 74.7
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 4.6e-67 258.1 152 79.6
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 4.6e-67 258.1 150 78.7
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 1.0e-66 256.9 154 77.9
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 3.0e-66 255.4 159 77.4
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 3.0e-66 255.4 152 78.3
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 1.1e-65 253.4 152 77.0
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.5e-65 253.1 149 78.5
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 1.8e-63 246.1 150 76.7
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 3.1e-63 245.4 159 72.3
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 4.0e-63 245.0 163 73.0
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 5.2e-63 244.6 159 73.0
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 1.2e-62 243.4 159 73.0
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 1.2e-62 243.4 159 73.0
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 2.0e-62 242.7 166 72.3
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 2.0e-62 242.7 159 73.6
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 7.6e-62 240.7 159 72.3
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 9.9e-62 240.4 160 72.5
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.7e-61 239.6 159 71.1
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.7e-61 239.6 159 71.1
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 2.9e-61 238.8 159 69.8
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 1.4e-60 236.5 161 69.6
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 2.4e-60 235.7 157 72.6
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 3.2e-60 235.3 152 74.3
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 3.2e-60 235.3 162 67.9
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 5.4e-60 234.6 149 73.8
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 7.1e-60 234.2 148 73.6
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 7.1e-60 234.2 149 73.2
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 9.3e-60 233.8 156 71.8
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 1.6e-59 233.0 163 69.3
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 2.7e-59 232.3 156 71.2
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 4.6e-59 231.5 149 75.2
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.0e-59 231.1 150 73.3
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.0e-58 230.3 151 72.8
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 1.3e-58 229.9 156 69.2
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 2.3e-58 229.2 150 72.0
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.3e-58 229.2 150 71.3
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 5.1e-58 228.0 151 69.5
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 1.1e-57 226.9 149 70.5
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 4.3e-57 224.9 149 71.1
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 2.1e-56 222.6 149 69.1
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 2.8e-56 222.2 151 70.2
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 3.6e-56 221.9 151 72.8
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 4.5e-54 214.9 148 68.9
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 9.9e-54 213.8 145 69.7
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 8.4e-53 210.7 145 69.7
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.4e-52 209.9 141 71.6
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 3.2e-52 208.8 141 70.9
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 4.2e-52 208.4 145 69.0
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 2.1e-51 206.1 149 67.1
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 1.8e-50 203.0 164 61.0
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 5.1e-50 201.4 163 60.7
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.7e-50 201.1 159 62.9
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.1e-49 200.3 145 64.8
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 8.1e-48 194.1 148 64.9
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.1e-47 193.7 149 65.1
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 6.9e-47 191.0 152 64.5
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.5e-46 189.9 132 71.2
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 1.2e-43 180.3 136 66.9
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 3.3e-41 172.2 147 58.5
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 1.2e-38 163.7 162 51.9
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 1.5e-38 163.3 162 51.9
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 2.0e-38 162.9 162 51.9
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 5.8e-38 161.4 161 51.6
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 7.6e-38 161.0 162 50.6
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 7.6e-38 161.0 162 50.6
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 1.0e-37 160.6 158 51.3
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 1.0e-37 160.6 162 50.6
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 3.8e-37 158.7 164 50.0
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 3.8e-37 158.7 164 50.0
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 3.8e-37 158.7 164 50.0
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 3.8e-37 158.7 162 50.6
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 3.8e-37 158.7 112 65.2
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 6.0e-35 151.4 138 53.6
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 7.9e-35 151.0 165 49.7
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 9.0e-31 137.5 154 46.8
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.7e-29 133.3 127 55.9
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 1.1e-25 120.6 87 65.5
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.9e-25 119.8 69 82.6
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 1.7e-24 116.7 97 60.8
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 3.8e-21 105.5 71 73.2
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 7.9e-19 97.8 62 67.7
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.4e-15 86.3 116 38.8
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 3.4e-14 82.4 117 35.9


User provided reference genes

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