Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G144800 Phaseolus vulgaris HOM05D005176 ORTHO05D006482 1.4e-190 669.5 331 100.0
VMungo0540G1825 Vigna mungo HOM05D005176 ORTHO05D006482 7.2e-176 620.5 332 91.9
Glyma.15G112900 Glycine max HOM05D005176 ORTHO05D006482 4.4e-173 611.3 331 91.2
Glyma.09G008500 Glycine max HOM05D005176 ORTHO05D006482 3.7e-172 608.2 332 90.7
Psat1g177440 Pisum sativum HOM05D005176 ORTHO05D006482 8.3e-156 553.9 335 82.7
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea HOM05D005176 ORTHO05D006482 8.9e-150 533.9 345 78.8
TPR.G13024 Trifolium pratense HOM05D005176 ORTHO05D006482 4.4e-149 531.6 301 85.7
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea HOM05D005176 ORTHO05D006482 7.5e-149 530.8 345 78.3
Ca_00707_v3 Cicer arietinum L. HOM05D005176 ORTHO05D006482 6.4e-148 527.7 348 77.9
Lj6g0018145 Lotus japonicus HOM05D005176 ORTHO05D006482 6.4e-148 527.7 342 77.8
Medtr2g025140 Medicago truncatula HOM05D005176 ORTHO05D006482 1.1e-147 526.9 340 78.8
Lalb_Chr15g0087861 Lupinus albus HOM05D005176 ORTHO05D006482 2.4e-147 525.8 354 76.6
QL03p008214 Quercus lobata HOM05D005176 ORTHO05D006482 3.9e-137 491.9 353 71.4
Oeu002752.3 Olea europaea HOM05D005176 ORTHO05D006482 6.6e-137 491.1 308 78.6
Haze_06890 Corylus avellana HOM05D005176 ORTHO05D006482 1.5e-136 490.0 328 75.0
Sc05g0009510 Simmondsia chinensis HOM05D005176 ORTHO05D006482 1.9e-136 489.6 302 78.1
QL05p070074 Quercus lobata HOM05D005176 ORTHO05D006482 3.3e-136 488.8 353 71.1
Cpa.g.sc152.62 Carica papaya HOM05D005176 ORTHO05D006482 2.1e-135 486.1 315 76.8
EL10Ac8g20147 Beta vulgaris HOM05D005176 ORTHO05D006482 3.6e-135 485.3 335 73.7
MD10G1328600 Malus domestica HOM05D005176 ORTHO05D006482 8.1e-135 484.2 335 71.6
COL.COLO4_31852 Corchorus olitorius HOM05D005176 ORTHO05D006482 1.1e-134 483.8 301 79.7
Prupe.4G013400 Prunus persica HOM05D005176 ORTHO05D006482 1.8e-134 483.0 310 76.1
Eucgr.E03960 Eucalyptus grandis HOM05D005176 ORTHO05D006482 2.4e-134 482.6 295 80.0
Gorai.009G182200 Gossypium raimondii HOM05D005176 ORTHO05D006482 8.9e-134 480.7 327 74.0
Gohir.A05G173800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 1.2e-133 480.3 327 73.7
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 3.4e-133 478.8 302 75.8
Thecc.06G230100 Theobroma cacao HOM05D005176 ORTHO05D006482 3.4e-133 478.8 352 69.9
Ciclev10015546m.g Citrus clementina HOM05D005176 ORTHO05D006482 5.8e-133 478.0 307 75.9
SalBow8G4341 Salvia bowleyana HOM05D005176 ORTHO05D006482 7.6e-133 477.6 315 74.3
Rhsim13G0148600 Rhododendron simsii HOM05D005176 ORTHO05D006482 9.9e-133 477.2 317 74.1
FvH4_3g01250 Fragaria vesca HOM05D005176 ORTHO05D006482 2.9e-132 475.7 325 72.6
Lj1A1237T47 Lonicera japonica HOM05D005176 ORTHO05D006482 2.9e-132 475.7 317 74.1
Sabra11G0011400 Salix brachista HOM05D005176 ORTHO05D006482 3.8e-132 475.3 328 74.7
Sabra11G0013200 Salix brachista HOM05D005176 ORTHO05D006482 3.8e-132 475.3 328 74.7
CANSAT56G2407 Cannabis sativa HOM05D005176 ORTHO05D006482 6.4e-132 474.6 316 74.1
Sopen11g006800 Solanum pennellii HOM05D005176 ORTHO05D006482 8.4e-132 474.2 307 74.9
AUR62012769 Chenopodium quinoa HOM05D005176 ORTHO05D006482 1.4e-131 473.4 298 77.9
Solyc11g011990.2 Solanum lycopersicum HOM05D005176 ORTHO05D006482 2.4e-131 472.6 308 75.6
MELO3C021713.2 Cucumis melo HOM05D005176 ORTHO05D006482 3.2e-131 472.2 342 69.3
PGR042G2916 Punica granatum HOM05D005176 ORTHO05D006482 3.2e-131 472.2 352 69.0
PGSC0003DMG400013335 Solanum tuberosum HOM05D005176 ORTHO05D006482 4.2e-131 471.9 322 73.0
FAN25G2381 Fragaria x ananassa HOM05D005176 ORTHO05D006482 2.1e-130 469.5 333 71.2
Migut.M01360 Erythranthe guttata HOM05D005176 ORTHO05D006482 2.7e-130 469.2 314 74.8
Cfa000134 Carpinus fangiana HOM05D005176 ORTHO05D006482 4.6e-130 468.4 286 79.7
Nn1g03357 Nelumbo nucifera HOM05D005176 ORTHO05D006482 4.6e-130 468.4 307 75.2
Hund21443 Selenicereus undatus HOM05D005176 ORTHO05D006482 4.6e-130 468.4 306 73.9
Dinv20117 Davidia involucrata HOM05D005176 ORTHO05D006482 7.8e-130 467.6 288 78.8
RcHm_v2.0_Chr5g0001781 Rosa chinensis HOM05D005176 ORTHO05D006482 7.8e-130 467.6 331 70.1
PSO832G1336 Papaver somniferum HOM05D005176 ORTHO05D006482 1.0e-129 467.2 325 72.0
TAR626G1813 Trochodendron aralioides HOM05D005176 ORTHO05D006482 1.0e-129 467.2 368 66.6
CiPaw.09G100100 Carya illinoinensis HOM05D005176 ORTHO05D006482 1.7e-129 466.5 318 73.0
Manes.16G002000 Manihot esculenta HOM05D005176 ORTHO05D006482 3.0e-129 465.7 314 73.2
CsaV3_1G045890 Cucumis sativus L. HOM05D005176 ORTHO05D006482 8.7e-129 464.2 303 74.6
Potri.011G021800 Populus trichocarpa HOM05D005176 ORTHO05D006482 1.1e-128 463.8 315 74.0
THA.LOC104812984 Tarenaya hassleriana HOM05D005176 ORTHO05D006482 1.5e-128 463.4 303 72.9
Lsat_1_v5_gn_7_14460 Lactuca sativa HOM05D005176 ORTHO05D006482 1.9e-128 463.0 305 73.1
Gohir.D05G176800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 2.5e-128 462.6 329 71.4
CAN.G1186.9 Capsicum annuum HOM05D005176 ORTHO05D006482 3.3e-128 462.2 300 75.0
Sp7g20380 Schrenkiella parvula HOM05D005176 ORTHO05D006482 3.3e-128 462.2 300 76.0
Aqoxy1G04164 Aquilegia oxysepala HOM05D005176 ORTHO05D006482 5.6e-128 461.5 329 69.6
CARHR229150 Cardamine hirsuta HOM05D005176 ORTHO05D006482 9.6e-128 460.7 297 75.8
MSTRG.16005 Avicennia marina HOM05D005176 ORTHO05D006482 1.3e-127 460.3 321 72.6
CSS0003829 Camellia sinensis var. sinensis HOM05D005176 ORTHO05D006482 4.8e-127 458.4 304 73.0
TWI38G1933 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 6.2e-127 458.0 307 73.0
Thhalv10025624m.g Eutrema salsugineum HOM05D005176 ORTHO05D006482 8.1e-127 457.6 325 71.1
AL7G31370 Arabidopsis lyrata HOM05D005176 ORTHO05D006482 1.4e-126 456.8 301 74.8
Potri.004G002600 Populus trichocarpa HOM05D005176 ORTHO05D006482 4.0e-126 455.3 329 68.1
Carub.0007s1906 Capsella rubella HOM05D005176 ORTHO05D006482 1.2e-125 453.8 301 74.8
BraA01t01306Z Brassica rapa HOM05D005176 ORTHO05D006482 1.5e-125 453.4 311 71.4
BcaNung03749 Brassica carinata HOM05D005176 ORTHO05D006482 2.0e-125 453.0 297 74.1
TWI63G1683 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 2.0e-125 453.0 309 71.8
BcaC09g51146 Brassica carinata HOM05D005176 ORTHO05D006482 5.8e-125 451.4 320 70.0
HanXRQChr05g0129171 Helianthus annuus HOM05D005176 ORTHO05D006482 7.6e-125 451.1 295 73.6
Sabra04G0001100 Salix brachista HOM05D005176 ORTHO05D006482 9.9e-125 450.7 329 67.5
BolC1t01601H Brassica oleracea HOM05D005176 ORTHO05D006482 2.2e-124 449.5 321 69.8
vmacro03656 Vaccinium macrocarpon HOM05D005176 ORTHO05D006482 6.4e-124 448.0 350 67.1
DCAR_004870 Daucus carota HOM05D005176 ORTHO05D006482 8.4e-124 447.6 334 67.1
AT4G22260 Arabidopsis thaliana HOM05D005176 ORTHO05D006482 2.4e-123 446.0 286 76.9
Actinidia26877 Actinidia chinensis HOM05D005176 ORTHO05D006482 7.1e-123 444.5 290 75.5
Atru.chr10.2310 Acer truncatum HOM05D005176 ORTHO05D006482 6.0e-122 441.4 287 73.9
Sed0020812 Sechium edule HOM05D005176 ORTHO05D006482 6.0e-122 441.4 268 78.4
Cc09_g01070 Coffea canephora HOM05D005176 ORTHO05D006482 1.0e-121 440.7 298 72.5
unitig_748.g7945 Utricularia gibba HOM05D005176 ORTHO05D006482 3.0e-121 439.1 301 72.4
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 5.1e-121 438.3 303 71.0
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 7.4e-120 434.5 312 69.2
Aa31LG6G4370 Aethionema arabicum HOM05D005176 ORTHO05D006482 1.6e-119 433.3 353 64.3
ATR1128G104 Amborella trichopoda HOM05D005176 ORTHO05D006482 6.2e-119 431.4 297 73.1
PSO210G5061 Papaver somniferum HOM05D005176 ORTHO05D006482 4.0e-118 428.7 312 69.6
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 5.3e-118 428.3 312 70.8
Nitab4.5_0000143g0540 Nicotiana tabacum HOM05D005176 ORTHO05D006482 6.9e-118 427.9 321 67.9
Ah.09g234400 Amaranthus hybridus HOM05D005176 ORTHO05D006482 2.9e-116 422.5 295 72.2
TAR624G0457 Trochodendron aralioides HOM05D005176 ORTHO05D006482 2.3e-113 412.9 226 87.2
Os04g0668900 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D006482 6.2e-111 404.8 344 61.9
MBI16_g26179_MAGBIO Magnolia biondii HOM05D005176 ORTHO05D006482 1.1e-110 404.1 338 62.7
MELO3C021708.2 Cucumis melo HOM05D005176 ORTHO05D006482 1.8e-110 403.3 394 56.1
Peaxi162Scf00063g00213 Petunia axillaris HOM05D005176 ORTHO05D006482 1.8e-110 403.3 315 66.7
Eucgr.E03967 Eucalyptus grandis HOM05D005176 ORTHO05D006482 7.6e-109 397.9 329 66.0
Zm00001eb066910 Zea mays HOM05D005176 ORTHO05D006482 7.1e-107 391.3 298 63.8
MD05G1354300 Malus domestica HOM05D005176 ORTHO05D006482 1.0e-105 387.5 315 63.2
Nitab4.5_0001198g0240 Nicotiana tabacum HOM05D005176 ORTHO05D006482 3.3e-104 382.5 249 74.3
CDE04G3552 Ceratophyllum demersum HOM05D005176 ORTHO05D006482 5.7e-104 381.7 314 61.8
SMO200G0146 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 3.7e-103 379.0 252 72.2
FAN21G2852 Fragaria x ananassa HOM05D005176 ORTHO05D006482 2.4e-102 376.3 360 59.2
GSVIVG01006689001 Vitis vinifera HOM05D005176 ORTHO05D006482 3.4e-101 372.5 247 74.5
Pp3c1_30120 Physcomitrium patens HOM05D005176 ORTHO05D006482 8.4e-100 367.9 284 63.7
Mapoly0050s0020 Marchantia polymorpha HOM05D005176 ORTHO05D006482 2.7e-98 362.8 245 70.6
Pp3c2_11230 Physcomitrium patens HOM05D005176 ORTHO05D006482 5.1e-97 358.6 225 74.2
CBR_g16017 Chara braunii HOM05D005176 ORTHO05D006482 6.9e-94 348.2 218 73.9
PSO675G3403 Papaver somniferum HOM05D005176 ORTHO05D006482 5.1e-89 332.0 244 66.4
ClCG01G009770 Citrullus lanatus HOM05D005176 ORTHO05D006482 9.7e-88 327.8 289 60.2
Zm00001eb066920 Zea mays HOM05D005176 ORTHO05D006482 5.1e-81 305.4 343 51.9
Duzib160G0919 Durio zibethinus HOM05D005176 ORTHO05D006482 4.5e-77 292.4 300 54.3
Hma1.2p1_2753F.1_g327930 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 3.6e-74 282.7 220 63.6
PRCOL_00003826 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 7.5e-72 275.0 283 50.5
MCO02G133 Micromonas commoda HOM05D005176 ORTHO05D006482 1.8e-70 270.4 216 60.2
FAN21G2340 Fragaria x ananassa HOM05D005176 ORTHO05D006482 3.8e-68 262.7 205 66.3
HPP92_004745 Vanilla planifolia HOM05D005176 ORTHO05D006482 1.2e-66 257.7 182 69.2
Dinv13952 Davidia involucrata HOM05D005176 ORTHO05D006482 1.4e-65 254.2 176 69.9
Pp3c27_6780 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.5e-64 250.8 209 56.0
SMO147G0375 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 6.3e-63 245.4 199 57.3
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis HOM05D005176 ORTHO05D006482 9.1e-62 241.5 200 56.5
Cre07.g350750 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 4.5e-61 239.2 195 58.5
Mapoly0003s0157 Marchantia polymorpha HOM05D005176 ORTHO05D006482 1.5e-59 234.2 190 58.4
Cre03.g172500 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 2.7e-58 229.9 196 57.7
AUR62021889 Chenopodium quinoa HOM05D005176 ORTHO05D006482 3.8e-52 209.5 301 44.9
MCO02G403 Micromonas commoda HOM05D005176 ORTHO05D006482 3.6e-50 203.0 190 52.1
Duzib235G1273 Durio zibethinus HOM05D005176 ORTHO05D006482 6.8e-49 198.7 120 78.3
GSVIVG01007272001 Vitis vinifera HOM05D005176 ORTHO05D006482 1.2e-42 177.9 290 43.1
Hma1.2p1_0298F.1_g117340 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 2.9e-39 166.8 89 87.6
PRCOL_00006497 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 9.2e-38 161.8 144 52.1
HPP92_004744 Vanilla planifolia HOM05D005176 ORTHO05D006482 4.6e-37 159.5 100 74.0
SEGI_26802 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 3.3e-35 153.3 112 62.5
AagrBONN_evm.TU.Sc2ySwM_344.415 Anthoceros agrestis HOM05D005176 ORTHO05D006482 2.8e-34 150.2 128 60.2
QL03p008204 Quercus lobata HOM05D005176 ORTHO05D006482 1.4e-30 137.9 110 65.5
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 2.1e-29 134.0 68 89.7
A03p53390 Brassica napus HOM05D005176 ORTHO05D006482 3.8e-23 113.2 112 56.2
arahy.Tifrunner.gnm1.ann1.E0HWS1 Arachis hypogaea HOM05D005176 ORTHO05D038931 4.6e-21 106.3 95 63.2
BraA03t14406Z Brassica rapa HOM05D005176 ORTHO05D006482 1.9e-19 100.9 98 58.2
CBR_g12323 Chara braunii HOM05D005176 ORTHO05D006482 1.6e-18 97.8 65 66.2
Lj3g0010948 Lotus japonicus HOM05D005176 ORTHO05D006482 1.2e-13 81.6 37 94.6
Os03g0847500 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D038931 4.6e-13 79.7 139 41.7
CBR_g12320 Chara braunii HOM05D000019 ORTHO05D009492 3.9e-12 76.6 81 48.1
Eucgr.E03965 Eucalyptus grandis HOM05D005176 ORTHO05D006482 9.6e-11 72.0 50 72.0
BolC7t45661H Brassica oleracea HOM05D005176 ORTHO05D006482 1.1e-09 68.6 71 56.3
Prupe.1G061900 Prunus persica HOM05D001659 ORTHO05D001659 2.0e-08 64.3 191 25.7
Nn3g19263 Nelumbo nucifera HOM05D001659 ORTHO05D001659 1.3e-07 61.6 191 24.1
PRCOL_00006496 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 4.2e-06 56.6 53 56.6
PGSC0003DMG400018484 Solanum tuberosum HOM05D001659 ORTHO05D001659 7.1e-06 55.8 191 24.1


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