Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 9.2e-59 229.9 111 100.0
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 4.6e-42 174.5 106 76.4
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 2.0e-37 159.1 103 70.9
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 1.5e-32 142.9 101 67.3
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 1.1e-27 126.7 101 56.4
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 2.3e-25 119.0 92 57.6
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 5.1e-25 117.9 104 53.8
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 1.5e-24 116.3 99 53.5
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.5e-24 116.3 104 57.7
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 2.5e-24 115.5 78 57.7
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 7.4e-24 114.0 90 57.8
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 9.6e-24 113.6 76 59.2
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 9.6e-24 113.6 115 49.6
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 1.6e-23 112.8 86 57.0
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 2.1e-23 112.5 102 49.0
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 2.8e-23 112.1 114 49.1
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 2.8e-23 112.1 94 53.2
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 3.7e-23 111.7 101 50.5
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 3.7e-23 111.7 91 53.8
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 4.8e-23 111.3 88 51.1
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 4.8e-23 111.3 91 50.5
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 6.2e-23 110.9 88 51.1
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 6.2e-23 110.9 88 51.1
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.4e-22 109.0 105 52.4
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 3.1e-22 108.6 101 50.5
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 4.0e-22 108.2 87 49.4
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 5.3e-22 107.8 95 50.5
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 6.9e-22 107.5 87 48.3
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 9.0e-22 107.1 101 52.5
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 2.0e-21 105.9 108 47.2
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 2.6e-21 105.5 99 50.5
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 5.8e-21 104.4 108 49.1
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 7.6e-21 104.0 108 46.3
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 1.0e-20 103.6 108 46.3
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 1.7e-20 102.8 96 52.1
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 4.9e-20 101.3 109 47.7
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 6.5e-20 100.9 84 53.6
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 8.4e-20 100.5 111 44.1
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 2.5e-19 99.0 102 46.1
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 4.2e-19 98.2 101 45.5
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 9.3e-19 97.1 70 52.9
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.2e-18 96.7 102 46.1
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 1.2e-18 96.7 95 50.5
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.6e-18 96.3 98 46.9
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 7.9e-18 94.0 99 48.5
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.0e-17 93.6 104 43.3
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 3.0e-17 92.0 95 45.3
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 5.1e-17 91.3 104 42.3
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 6.7e-17 90.9 73 53.4
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 1.1e-16 90.1 111 40.5
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 1.9e-16 89.4 73 52.1
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 1.9e-16 89.4 73 52.1
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.9e-16 89.4 104 42.3
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 2.5e-16 89.0 69 50.7
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 2.5e-16 89.0 95 47.4
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 4.3e-16 88.2 82 43.9
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 7.4e-16 87.4 73 50.7
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.6e-15 86.3 110 40.0
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 2.2e-15 85.9 82 48.8
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 2.8e-15 85.5 71 50.7
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 3.7e-15 85.1 73 49.3
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 4.8e-15 84.7 82 48.8
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 4.8e-15 84.7 82 48.8
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 4.8e-15 84.7 82 48.8
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 6.3e-15 84.3 71 52.1
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 6.3e-15 84.3 71 52.1
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 6.3e-15 84.3 71 52.1
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 6.3e-15 84.3 68 48.5
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 1.1e-14 83.6 67 53.7
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 6.9e-14 80.9 102 40.2
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 1.5e-13 79.7 111 39.6
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 1.5e-13 79.7 111 39.6
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 2.2e-12 75.9 65 49.2
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 2.2e-12 75.9 65 49.2
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 5.0e-12 74.7 88 39.8
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 1.4e-11 73.2 65 47.7
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 3.2e-11 72.0 65 46.2
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 7.2e-11 70.9 76 38.2
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 1.0e-09 67.0 54 44.4
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 5.7e-08 61.2 109 33.0
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 2.4e-06 55.8 50 50.0


User provided reference genes

Program Settings