Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G143000 Phaseolus vulgaris HOM05D007829 ORTHO05D009903 1.1e-145 520.0 262 100.0
VMungo0540G1426 Vigna mungo HOM05D007829 ORTHO05D009903 3.8e-111 405.2 263 79.5
Glyma.15G114900 Glycine max HOM05D007829 ORTHO05D009903 7.9e-101 370.9 266 73.7
Glyma.09G010400 Glycine max HOM05D007829 ORTHO05D009903 6.3e-98 361.3 264 72.3
Lj6g0010113 Lotus japonicus HOM05D007829 ORTHO05D009903 3.6e-69 265.8 267 56.9
Medtr2g025760 Medicago truncatula HOM05D007829 ORTHO05D009903 2.5e-62 243.0 256 57.4
Psat1g175960 Pisum sativum HOM05D007829 ORTHO05D009903 4.7e-61 238.8 272 54.8
arahy.Tifrunner.gnm1.ann1.G424KC Arachis hypogaea HOM05D007829 ORTHO05D009903 5.9e-56 221.9 269 48.0
Lalb_Chr15g0088001 Lupinus albus HOM05D007829 ORTHO05D009903 2.3e-52 209.9 262 48.9
CiPaw.10G078200 Carya illinoinensis HOM05D007829 ORTHO05D009903 1.6e-45 187.2 215 44.2
Prupe.4G010000 Prunus persica HOM05D007829 ORTHO05D009903 3.2e-41 172.9 239 42.3
TPR.G13103 Trifolium pratense HOM05D007829 ORTHO05D009903 9.2e-41 171.4 158 58.9
Manes.08G071000 Manihot esculenta HOM05D007829 ORTHO05D009903 1.2e-40 171.0 192 45.3
Thecc.06G233800 Theobroma cacao HOM05D007829 ORTHO05D009903 1.6e-40 170.6 203 45.8
Actinidia39272 Actinidia chinensis HOM05D007829 ORTHO05D009903 3.5e-40 169.5 191 46.6
Rhsim02G0099400 Rhododendron simsii HOM05D007829 ORTHO05D009903 3.9e-39 166.0 201 42.3
Ciclev10018278m.g Citrus clementina HOM05D007829 ORTHO05D009903 8.6e-39 164.9 153 52.9
CSS0014217 Camellia sinensis var. sinensis HOM05D007829 ORTHO05D009903 2.5e-38 163.3 256 39.8
Sc05g0009620 Simmondsia chinensis HOM05D007829 ORTHO05D009903 5.6e-38 162.2 198 43.9
Nn1g07397 Nelumbo nucifera HOM05D007829 ORTHO05D009903 7.3e-38 161.8 231 39.8
TPR.G18790 Trifolium pratense HOM05D007829 ORTHO05D009903 9.5e-38 161.4 175 54.9
Dinv07407 Davidia involucrata HOM05D007829 ORTHO05D009903 1.2e-37 161.0 209 41.1
Potri.016G013200 Populus trichocarpa HOM05D007829 ORTHO05D009903 2.1e-37 160.2 191 44.0
Hma1.2p1_0657F.1_g197120 Hydrangea macrophylla HOM05D007829 ORTHO05D009903 2.8e-37 159.8 201 42.8
MD10G1332100 Malus domestica HOM05D007829 ORTHO05D009903 2.8e-37 159.8 238 40.3
Gohir.D10G008900 Gossypium hirsutum HOM05D007829 ORTHO05D009903 1.2e-35 154.5 228 39.9
Gorai.011G009700 Gossypium raimondii HOM05D007829 ORTHO05D009903 1.5e-35 154.1 237 38.8
Eucgr.D01411 Eucalyptus grandis HOM05D007829 ORTHO05D009903 2.0e-35 153.7 180 45.0
Gohir.A10G009200 Gossypium hirsutum HOM05D007829 ORTHO05D009903 2.0e-35 153.7 228 39.5
TWI38G1785 Tripterygium wilfordii HOM05D007829 ORTHO05D009903 7.5e-35 151.8 211 40.3
Cpa.g.sc75.113 Carica papaya HOM05D007829 ORTHO05D009903 4.9e-34 149.1 174 42.0
PSO675G8147 Papaver somniferum HOM05D007829 ORTHO05D009903 4.9e-34 149.1 257 37.7
PSO541G5076 Papaver somniferum HOM05D007829 ORTHO05D009903 8.3e-34 148.3 208 40.4
COL.COLO4_31889 Corchorus olitorius HOM05D007829 ORTHO05D009903 4.1e-33 146.0 244 37.7
CARHR229280 Cardamine hirsuta HOM05D007829 ORTHO05D009903 9.2e-33 144.8 176 42.6
Aqoxy2G02687 Aquilegia oxysepala HOM05D007829 ORTHO05D009903 2.1e-32 143.7 167 38.9
FvH4_3g00940 Fragaria vesca HOM05D007829 ORTHO05D009903 2.1e-32 143.7 265 37.7
Sabra16G0002200 Salix brachista HOM05D007829 ORTHO05D009903 2.1e-32 143.7 227 37.0
PGR004G1136 Punica granatum HOM05D007829 ORTHO05D009903 6.0e-32 142.1 181 43.1
FAN21G3309 Fragaria x ananassa HOM05D007829 ORTHO05D009903 6.6e-31 138.7 232 40.5
Migut.M01399 Erythranthe guttata HOM05D007829 ORTHO05D009903 2.5e-30 136.7 189 38.1
Cc00_g34400 Coffea canephora HOM05D007829 ORTHO05D009903 4.3e-30 136.0 208 36.5
THA.LOC104813576 Tarenaya hassleriana HOM05D007829 ORTHO05D009903 5.6e-30 135.6 176 37.5
TAR627G0564 Trochodendron aralioides HOM05D007829 ORTHO05D009903 9.5e-30 134.8 201 38.3
TAR627G1193 Trochodendron aralioides HOM05D007829 ORTHO05D009903 9.5e-30 134.8 201 38.3
DCAR_004889 Daucus carota HOM05D003856 ORTHO05D004547 1.2e-29 134.4 155 42.6
Sabra16G0015800 Salix brachista HOM05D007829 ORTHO05D009903 2.1e-29 133.7 208 36.1
Oeu002768.1 Olea europaea HOM05D007829 ORTHO05D009903 3.6e-29 132.9 171 39.2
SGA_v2.0_scaffold4G01872 Striga asiatica HOM05D007829 ORTHO05D009903 3.6e-29 132.9 192 35.4
FAN25G0937 Fragaria x ananassa HOM05D007829 ORTHO05D009903 1.8e-28 130.6 245 39.6
BraA01t01318Z Brassica rapa HOM05D007829 ORTHO05D009903 2.3e-28 130.2 169 38.5
Duzib235G0645 Durio zibethinus HOM05D007829 ORTHO05D009903 2.3e-28 130.2 206 40.3
QL05p069622 Quercus lobata HOM05D007829 ORTHO05D009903 2.3e-28 130.2 182 41.2
BcaC09g51100 Brassica carinata HOM05D007829 ORTHO05D009903 4.0e-28 129.4 169 38.5
CANSAT56G1477 Cannabis sativa HOM05D007829 ORTHO05D009903 4.0e-28 129.4 209 38.3
C01p16640 Brassica napus HOM05D007829 ORTHO05D009903 1.5e-27 127.5 175 37.1
BolC1t01611H Brassica oleracea HOM05D007829 ORTHO05D009903 2.0e-27 127.1 169 37.9
Sp7g20500 Schrenkiella parvula HOM05D007829 ORTHO05D009903 2.0e-27 127.1 151 41.1
RcHm_v2.0_Chr5g0001461 Rosa chinensis HOM05D007829 ORTHO05D009903 2.2e-26 123.6 266 33.8
A01p13730 Brassica napus HOM05D007829 ORTHO05D009903 2.4e-25 120.2 170 37.1
Carub.0007s1893 Capsella rubella HOM05D007829 ORTHO05D009903 4.1e-25 119.4 151 41.1
Solyc11g012300.1 Solanum lycopersicum HOM05D007829 ORTHO05D009903 2.1e-24 117.1 233 30.5
AT4G22370 Arabidopsis thaliana HOM05D007829 ORTHO05D009903 3.5e-24 116.3 123 44.7
CDE11G1237 Ceratophyllum demersum HOM05D007829 ORTHO05D009903 3.5e-24 116.3 195 34.4
TAR629G0037 Trochodendron aralioides HOM05D007829 ORTHO05D009903 1.5e-22 110.9 115 44.3
Thhalv10027004m.g Eutrema salsugineum HOM05D007829 ORTHO05D009903 3.3e-22 109.8 124 40.3
MBI19_g06149_MAGBIO Magnolia biondii HOM05D007829 ORTHO05D009903 7.3e-22 108.6 130 38.5
PGSC0003DMG400013350 Solanum tuberosum HOM05D007829 ORTHO05D009903 9.6e-22 108.2 128 40.6
Aa31LG6G4470 Aethionema arabicum HOM05D007829 ORTHO05D009903 1.2e-21 107.8 135 39.3
ATR0712G049 Amborella trichopoda HOM05D007829 ORTHO05D009903 4.4e-19 99.4 144 35.4
Sed0017863 Sechium edule HOM05D007829 ORTHO05D009903 9.9e-19 98.2 188 34.0
Peaxi162Scf00352g00215 Petunia axillaris HOM05D007829 ORTHO05D009903 1.3e-18 97.8 168 32.1
Cfa000096 Carpinus fangiana HOM05D007829 ORTHO05D009903 3.8e-18 96.3 138 40.6
AL7G31240 Arabidopsis lyrata HOM05D007829 ORTHO05D009903 6.4e-18 95.5 104 41.3
arahy.Tifrunner.gnm1.ann1.10XUBW Arachis hypogaea HOM05D007829 ORTHO05D009903 7.8e-16 88.6 142 43.0
Sopen11g007080 Solanum pennellii HOM05D007829 ORTHO05D009903 7.8e-16 88.6 132 33.3
SalBow8G1028 Salvia bowleyana HOM05D007829 ORTHO05D009903 1.5e-14 84.3 171 31.0
unitig_5.g30996 Utricularia gibba HOM05D000093 ORTHO05D001309 6.9e-12 75.5 127 34.6
ClCG01G021470 Citrullus lanatus HOM05D007829 ORTHO05D009903 1.5e-11 74.3 187 29.9
DCAR_000629 Daucus carota HOM05D002745 ORTHO05D002945 1.6e-08 64.3 129 29.5
Sabra01G0075300 Salix brachista HOM05D002745 ORTHO05D002945 6.0e-08 62.4 124 29.0
CSS0032449 Camellia sinensis var. sinensis HOM05D002745 ORTHO05D002945 1.0e-07 61.6 153 26.1
AL7G47950 Arabidopsis lyrata HOM05D002745 ORTHO05D002945 1.3e-07 61.2 124 29.0
Rhsim07G0088000 Rhododendron simsii HOM05D002745 ORTHO05D002945 1.3e-07 61.2 119 30.3
HPP92_015464 Vanilla planifolia HOM05D007829 ORTHO05D009903 1.3e-07 61.2 95 33.7
AT5G41470 Arabidopsis thaliana HOM05D002745 ORTHO05D002945 5.1e-07 59.3 124 28.2
Potri.001G100500 Populus trichocarpa HOM05D002745 ORTHO05D002945 1.1e-06 58.2 122 27.9
Manes.01G058300 Manihot esculenta HOM05D002745 ORTHO05D002945 1.9e-06 57.4 196 24.5
Sed0022750 Sechium edule HOM05D007829 ORTHO05D009903 1.9e-06 57.4 124 27.4
Duzib205G0538 Durio zibethinus HOM05D002745 ORTHO05D002945 2.5e-06 57.0 148 27.0
Potri.003G131500 Populus trichocarpa HOM05D002745 ORTHO05D002945 2.5e-06 57.0 123 27.6
Thecc.03G284700 Theobroma cacao HOM05D002745 ORTHO05D002945 2.5e-06 57.0 147 25.9
Medtr5g010050 Medicago truncatula HOM05D002745 ORTHO05D002945 3.3e-06 56.6 116 28.4
Sabra03G0093800 Salix brachista HOM05D002745 ORTHO05D002945 5.6e-06 55.8 122 24.6
unitig_748.g7131 Utricularia gibba HOM05D007829 ORTHO05D009903 7.3e-06 55.5 113 31.9


User provided reference genes

Program Settings