Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G138000 Phaseolus vulgaris HOM05D002323 ORTHO05D307381 3.4e-83 311.6 157 100.0
Glyma.19G072000 Glycine max HOM05D002323 ORTHO05D002470 4.3e-09 65.5 56 55.4
Cc07_g00830 Coffea canephora HOM05D002323 ORTHO05D002470 5.6e-09 65.1 54 57.4
Lalb_Chr06g0174271 Lupinus albus HOM05D002323 ORTHO05D002470 7.3e-09 64.7 66 48.5
Glyma.05G079100 Glycine max HOM05D002323 ORTHO05D002470 9.5e-09 64.3 56 53.6
Lalb_Chr02g0157691 Lupinus albus HOM05D002323 ORTHO05D002470 9.5e-09 64.3 49 63.3
VMungo0464G0968 Vigna mungo HOM05D002323 ORTHO05D002470 1.2e-08 63.9 71 46.5
Dinv33337 Davidia involucrata HOM05D002323 ORTHO05D002470 3.6e-08 62.4 67 47.8
arahy.Tifrunner.gnm1.ann1.4QJN5H Arachis hypogaea HOM05D002323 ORTHO05D002470 4.7e-08 62.0 53 56.6
arahy.Tifrunner.gnm1.ann1.H530GP Arachis hypogaea HOM05D002323 ORTHO05D002470 4.7e-08 62.0 53 56.6
Oeu005103.1 Olea europaea HOM05D002323 ORTHO05D002470 4.7e-08 62.0 56 53.6
TWI36G0360 Tripterygium wilfordii HOM05D002323 ORTHO05D002470 4.7e-08 62.0 49 63.3
Nitab4.5_0000760g0110 Nicotiana tabacum HOM05D002323 ORTHO05D002470 6.1e-08 61.6 54 55.6
Lj2g0025333 Lotus japonicus HOM05D002323 ORTHO05D002470 8.0e-08 61.2 56 51.8
Nitab4.5_0003376g0040 Nicotiana tabacum HOM05D002323 ORTHO05D002470 8.0e-08 61.2 54 53.7
Phvul.004G072400 Phaseolus vulgaris HOM05D002323 ORTHO05D002470 8.0e-08 61.2 56 51.8
Lalb_Chr21g0317441 Lupinus albus HOM05D002323 ORTHO05D002470 1.0e-07 60.8 51 58.8
Cfa007228 Carpinus fangiana HOM05D002323 ORTHO05D002470 2.3e-07 59.7 66 47.0
Haze_14875 Corylus avellana HOM05D002323 ORTHO05D002470 2.3e-07 59.7 66 47.0
Manes.15G160900 Manihot esculenta HOM05D002323 ORTHO05D002470 3.0e-07 59.3 51 60.8
Nitab4.5_0010204g0030 Nicotiana tabacum HOM05D002323 ORTHO05D002470 3.0e-07 59.3 48 56.2
Ca_04443_v3 Cicer arietinum L. HOM05D002323 ORTHO05D002470 4.0e-07 58.9 53 54.7
Ciclev10016720m.g Citrus clementina HOM05D002323 ORTHO05D002470 4.0e-07 58.9 49 59.2
Rhsim10G0006400 Rhododendron simsii HOM05D002323 ORTHO05D002470 4.0e-07 58.9 43 62.8
vmacro05957 Vaccinium macrocarpon HOM05D002323 ORTHO05D002470 4.0e-07 58.9 43 62.8
Eucgr.I01647 Eucalyptus grandis HOM05D002323 ORTHO05D002470 5.2e-07 58.5 53 52.8
Nn4g22337 Nelumbo nucifera HOM05D002323 ORTHO05D002470 5.2e-07 58.5 56 53.6
ClCG05G013510 Citrullus lanatus HOM05D002323 ORTHO05D002470 6.8e-07 58.2 67 44.8
MELO3C014885.2 Cucumis melo HOM05D002323 ORTHO05D002470 6.8e-07 58.2 67 44.8
CsaV3_3G027010 Cucumis sativus L. HOM05D002323 ORTHO05D002470 6.8e-07 58.2 67 44.8
Peaxi162Scf00881g00238 Petunia axillaris HOM05D002323 ORTHO05D002470 6.8e-07 58.2 54 50.0
QL02p071435 Quercus lobata HOM05D002323 ORTHO05D002470 6.8e-07 58.2 43 65.1
CSS0018545 Camellia sinensis var. sinensis HOM05D002323 ORTHO05D002470 8.9e-07 57.8 43 62.8
CSS0028265 Camellia sinensis var. sinensis HOM05D002323 ORTHO05D002470 8.9e-07 57.8 43 62.8
Hma1.2p1_1278F.1_g272300 Hydrangea macrophylla HOM05D002323 ORTHO05D002470 8.9e-07 57.8 51 56.9
Medtr6g024140 Medicago truncatula HOM05D002323 ORTHO05D002470 8.9e-07 57.8 54 53.7
Nn3g16469 Nelumbo nucifera HOM05D002323 ORTHO05D002470 8.9e-07 57.8 49 57.1
Nitab4.5_0002050g0160 Nicotiana tabacum HOM05D002323 ORTHO05D002470 8.9e-07 57.8 48 56.2
THA.LOC104825510 Tarenaya hassleriana HOM05D002323 ORTHO05D002470 8.9e-07 57.8 56 50.0
ATR0561G018 Amborella trichopoda HOM05D002323 ORTHO05D002470 1.2e-06 57.4 51 56.9
arahy.Tifrunner.gnm1.ann1.ND92EZ Arachis hypogaea HOM05D002323 ORTHO05D002470 1.2e-06 57.4 54 53.7
CDE02G2537 Ceratophyllum demersum HOM05D001945 ORTHO05D002470 1.2e-06 57.4 50 56.0
Oeu011748.2 Olea europaea HOM05D002323 ORTHO05D002470 1.2e-06 57.4 53 52.8
GSVIVG01033094001 Vitis vinifera HOM05D002323 ORTHO05D002470 1.2e-06 57.4 51 54.9
MELO3C010745.2 Cucumis melo HOM05D002323 ORTHO05D002470 1.5e-06 57.0 49 49.0
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 1.5e-06 57.0 68 45.6
CiPaw.03G055500 Carya illinoinensis HOM05D002323 ORTHO05D002470 2.0e-06 56.6 63 47.6
Peaxi162Scf00420g00545 Petunia axillaris HOM05D002323 ORTHO05D002470 2.0e-06 56.6 48 54.2
THA.LOC104807579 Tarenaya hassleriana HOM05D002323 ORTHO05D002470 2.0e-06 56.6 56 48.2
MSTRG.3076 Avicennia marina HOM05D002323 ORTHO05D002470 2.6e-06 56.2 48 58.3
Manes.17G103300 Manihot esculenta HOM05D002323 ORTHO05D002470 2.6e-06 56.2 43 65.1
SalBow7G2550 Salvia bowleyana HOM05D002323 ORTHO05D002470 2.6e-06 56.2 43 65.1
arahy.Tifrunner.gnm1.ann1.QXLT8L Arachis hypogaea HOM05D002323 ORTHO05D002470 3.4e-06 55.8 54 53.7
ECA246G1523 Erigeron canadensis HOM05D002323 ORTHO05D002470 3.4e-06 55.8 49 57.1
FvH4_6g53520 Fragaria vesca HOM05D002323 ORTHO05D002470 3.4e-06 55.8 55 50.9
TAR374G0071 Trochodendron aralioides HOM05D002323 ORTHO05D002470 3.4e-06 55.8 51 52.9
Aa31LG7G9820 Aethionema arabicum HOM05D002323 ORTHO05D002470 4.4e-06 55.5 54 51.9
CsaV3_2G025460 Cucumis sativus L. HOM05D002323 ORTHO05D002470 4.4e-06 55.5 49 49.0
FAN09G1446 Fragaria x ananassa HOM05D002323 ORTHO05D002470 4.4e-06 55.5 55 50.9
Glyma.18G007000 Glycine max HOM05D002323 ORTHO05D002470 4.4e-06 55.5 56 55.4
Sed0027233 Sechium edule HOM05D002323 ORTHO05D002470 4.4e-06 55.5 66 43.9
CiPaw.04G036600 Carya illinoinensis HOM05D002323 ORTHO05D002470 5.8e-06 55.1 43 62.8
Prupe.3G306200 Prunus persica HOM05D002323 ORTHO05D002470 5.8e-06 55.1 43 60.5
TPR.G15198 Trifolium pratense HOM05D002323 ORTHO05D002470 5.8e-06 55.1 53 52.8
CAN.G473.99 Capsicum annuum HOM05D002323 ORTHO05D002470 7.5e-06 54.7 48 56.2
Solyc02g094140.4 Solanum lycopersicum HOM05D002323 ORTHO05D002470 7.5e-06 54.7 72 38.9
Sopen02g038770 Solanum pennellii HOM05D002323 ORTHO05D002470 7.5e-06 54.7 72 38.9
CAN.G1300.2 Capsicum annuum HOM05D002323 ORTHO05D002470 9.8e-06 54.3 48 54.2
CARHR026980 Cardamine hirsuta HOM05D002323 ORTHO05D002470 9.8e-06 54.3 49 53.1
AUR62017827 Chenopodium quinoa HOM05D002323 ORTHO05D002470 9.8e-06 54.3 43 51.2
ClCG08G017110 Citrullus lanatus HOM05D002323 ORTHO05D002470 9.8e-06 54.3 49 49.0
Lsat_1_v5_gn_3_29860 Lactuca sativa HOM05D002323 ORTHO05D002470 9.8e-06 54.3 53 47.2
Lj7C609T11 Lonicera japonica HOM05D002323 ORTHO05D002470 9.8e-06 54.3 48 54.2
MD13G1118400 Malus domestica HOM05D002323 ORTHO05D002470 9.8e-06 54.3 44 59.1
Solyc02g068130.4 Solanum lycopersicum HOM05D002323 ORTHO05D002470 9.8e-06 54.3 48 54.2
Sopen02g017240 Solanum pennellii HOM05D002323 ORTHO05D002470 9.8e-06 54.3 48 54.2
PGSC0003DMG400020255 Solanum tuberosum HOM05D002323 ORTHO05D002470 9.8e-06 54.3 48 52.1


User provided reference genes

Program Settings