Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 5.8e-198 694.1 371 100.0
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 3.4e-158 562.0 379 82.8
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 1.2e-150 537.0 377 80.9
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 6.3e-136 488.0 383 74.4
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 1.8e-111 406.8 370 65.1
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 9.8e-105 384.4 386 61.7
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 2.7e-94 349.7 366 59.0
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 5.9e-94 348.6 396 57.1
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 4.9e-88 328.9 396 55.6
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 2.4e-87 326.6 381 56.7
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.0e-65 253.8 367 48.0
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 2.0e-65 253.8 367 48.0
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 2.0e-65 253.8 382 46.6
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 9.3e-63 245.0 402 45.0
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 7.1e-55 218.8 404 42.1
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 2.6e-49 200.3 396 40.2
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 2.9e-48 196.8 403 41.2
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 6.7e-45 185.7 374 38.8
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 8.1e-43 178.7 387 35.7
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 4.8e-35 152.9 374 34.0
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 5.5e-31 139.4 390 33.8
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 2.7e-30 137.1 379 32.5
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 1.3e-29 134.8 377 33.4
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 1.3e-27 128.3 371 32.6
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 1.1e-26 125.2 359 33.1
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 2.9e-24 117.1 426 31.2
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 5.3e-18 96.3 375 30.9
Aqoxy2G01997 Aquilegia oxysepala HOM05D009025 ORTHO05D011227 1.1e-15 88.6 433 28.9
Eucgr.E04236 Eucalyptus grandis HOM05D009025 ORTHO05D011227 4.7e-14 83.2 142 36.6
ATR0751G165 Amborella trichopoda HOM05D009025 ORTHO05D011227 3.0e-13 80.5 374 27.8
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 1.8e-10 71.2 166 36.1
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 5.9e-09 66.2 165 33.3
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 3.8e-08 63.5 355 23.9
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 7.2e-07 59.3 102 35.3
Haze_07066 Corylus avellana HOM05D009025 ORTHO05D011227 6.1e-06 56.2 268 30.6


User provided reference genes

Program Settings